Caenorhabditis briggsae (nematode): CBG_10464
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Entry
CBG_10464 CDS
T01054
Name
(RefSeq) Protein CBG10464
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_10464
04121 Ubiquitin system [BR:
cbr04121
]
CBG_10464
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
CBG_10464
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
CBG_10464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
8577798
NCBI-ProteinID:
XP_002635804
WormBase:
CBG10464
UniProt:
A8XBA0
A0AAE9A1Y6
LinkDB
All DBs
Position
V:3416573..3421607
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AA seq
702 aa
AA seq
DB search
MSSMVWNFFQKPDFPVEYVPCSKCNVLLAYKGTTSGLKKHLKAKHFADYQRIMMQKGVTG
TSNCNYNHSELLLARAFCTGHVPYEFVENPEFKFFLNSLNCEFKVPSMNRIREVLMVNTS
SLIRQNTFELSRAKDYVIITDGLSESKFESPTFLSVYVSHVDQYTFERKVLLCGLTYIDE
KSDRAGNMRRVQNLVDSVGLKFQENQIIVCDMDQNLKENELSIRNIPCAGHAISQIFEEF
GSRVKNAAKIHQDIKQIFAVLEEDEARLAKALSLQKDYKVQIPLPLKSSTSKWGSLFTDM
QGYITNEAYFVFVPNLGAKEHQLLNSRKLSEAQNFVKLLQPLHIALEALTSENSFCSDIV
PNLLCAKEDFDENDPSAVVLAELVQEKITAYLSNDIILVSMISDPRYAYVPNLVDPRTWQ
EAEQLLIAEETVASALSSISPNTVKDEGSEETARGLAGLLKRKIKSECPAKNLTSELLHY
QALMATNRPCHTSDPLQFWKDQQHNLPKLASLSIKNLVAMASTTVSEKLFRKCSGVINSK
VSRIDKRDIELYLLENAISPKLDLLEEESSSYQEPEPESYLDNTFLDFTSAPEEPTTSQL
SDVKLEPEDPVRSSPRPMPEFGQPSIIQPPLIAPSLIAHRPPQLTHQPRLSPAMMAANNF
PINPALNPPSLGSNPASRISSRIAPPIPTSTSRPIFFKDNRL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatggtgtggaattttttccagaaacccgactttcctgtcgaatacgttccg
tgttcgaaatgtaacgttttgttggcatacaaaggaacgacgtctggcttgaagaaacat
ttgaaggccaaacatttcgccgattatcaacggattatgatgcagaagggcgtcaccggc
acttcaaattgcaactacaaccactcggaactgctcctggcgcgcgcattctgcaccggc
cacgttccctacgaattcgtcgaaaacccagaattcaaatttttcctcaactcgctaaat
tgcgaattcaaagttccaagtatgaatcgaattcgtgaggttttgatggtcaatacgtcg
tcgctcatcagacaaaatacgtttgaattgagcagagcaaaggattatgtgattatcact
gatggactatcagaatctaaatttgagagtcccacatttttatcagtatacgtgtcacac
gtggatcagtatactttcgagaggaaggttttgctctgcggactgacctacatcgacgag
aaatcggatcgagctggaaatatgagaagagtgcaaaatttggtcgatagtgttggccta
aaatttcaagaaaatcaaattatcgtctgtgatatggaccagaatctgaaggaaaatgaa
ttaagtattagaaatattccttgtgccggccacgcgatcagtcaaattttcgaagaattt
ggatcccgagtgaaaaacgcggcaaaaattcatcaagacatcaaacagatcttcgcggta
ctggaggaggatgaggcgaggctggcaaaggctctttcattacaaaaagactacaaagtc
cagattccacttcccttaaaatcgtccacaagcaaatggggctcgctttttacggatatg
cagggatacataacgaatgaagcctactttgtctttgtcccaaatctcggcgctaaagaa
caccaactgctcaactctcggaaactttcggaagctcaaaatttcgtaaaactcttgcaa
ccacttcacatagctctagaagcgttgacctctgaaaactcgttttgctcggatatcgtg
ccaaacttgttgtgtgccaaggaagattttgatgagaacgatccatcggccgtggtgttg
gccgagctggttcaggagaaaatcactgcctatctgagcaatgacatcattctcgtgtcc
atgatctcggaccctaggtatgcctatgttccgaatctggttgatccaaggacatggcaa
gaggctgaacagcttttgattgctgaggaaactgtagctagcgctttatcgtcgattagt
ccgaatacagtgaaagacgaaggatcggaagagacggcgagagggctggctggtctgttg
aagagaaaaatcaaaagcgagtgtccggcgaagaatttgacgtccgaactcctgcactac
caagccctgatggccaccaaccgaccttgccacacctcggatcctctccaattctggaaa
gatcaacaacacaatcttccaaagctggcatccctctcaatcaagaatctcgtcgcgatg
gcctcaactacagtatccgagaagctgttccgaaaatgttcaggagttattaactcaaag
gtctcaagaatcgacaaacgggacatcgagctgtatcttctggagaatgcaatctcgcca
aaacttgatttacttgaagaagagagttcaagctaccaagagccagagccagaatcatat
ctagacaacacatttttggatttcacgagtgctcctgaagagccaacgacttcacaactc
tctgatgtgaaactagaacccgaggatcctgtacgatcatcaccacgaccaatgccagag
tttgggcaaccgtcgatcatccaaccaccactaattgctccatctctcattgctcatcgt
ccaccgcagctgacgcatcaaccccggctatcaccagctatgatggctgccaataacttt
ccaatcaatccagcactgaatccaccaagcctaggcagtaatccggctagccgaatcagt
agccgaatcgcaccgcccattccgaccagcacttctcgccctatttttttcaaggataat
cggctttaa
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