Caenorhabditis briggsae (nematode): CBG_10788
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Entry
CBG_10788 CDS
T01054
Name
(RefSeq) Protein CBG10788
KO
K04523
ubiquilin
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_10788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_10788
03051 Proteasome [BR:
cbr03051
]
CBG_10788
Membrane trafficking [BR:
cbr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
CBG_10788
Proteasome [BR:
cbr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
CBG_10788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
XPC-binding
Rad60-SLD
YukD
Rad60-SLD_2
Ubiquitin_TPR1
Dsc3_N
UBA_7
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
8581958
NCBI-ProteinID:
XP_045094357
WormBase:
CBG10788
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Position
I:complement(<6424887..>6430887)
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AA seq
525 aa
AA seq
DB search
MATEGALIKVTVKSPSQRFDVEISPSASISELKDKVLLSVPTANKEQICIIYTGKILKDD
ETLVQNKISDGHTVHLVVRNQNRPAGPASSPAAASTAPPPSSQPSAAPPPSGNPFGGFGT
MGGASPADILNNPDAVRSVMDNPITQQLLSNPEFMRTIIQSNPGFQEMIESNPEVGHILN
DPNIMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGIPGGEAALERLYNDVQEPLMNSASNS
LRGNPFASLRGQQSNEPRVDRAGQENNEALPNPWASNNSSSNNASNNRSADFNSMMDSPG
FGSLMEQMMSNPSMQASMFSPEVVNSIRQSMTNNPALIDAVIGSMPTARDNPQITESIRR
NFPQMLSMMSDPSVMQAMQNPRVSQAFRQIQDGFATLRQEAPQLLNMFHAQAGPGMDQLF
GNAAANAAAGTTGTPSAASTAAGGVGNGMSGLADLIRHMNMGGRQAAGGAPAAAAPANPE
QTYASQLEQLQSMGFSDRARNIAALTAAFGDLNAAVERLLNSPPQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggtgcactcatcaaggtaactgtcaaatccccatctcaacgattcgat
gtggagatttctccaagtgcctcaatctctgaattgaaagacaaagttctcctttcggtg
ccaactgccaacaaggaacaaatatgcataatttatactggtaaaattctgaaagacgac
gaaacccttgttcagaacaaaatctctgacggtcacactgttcacttggtagttagaaat
caaaatcgtccagcaggacctgcatcaagtcctgcagccgcttccactgctccaccacct
tctagtcaaccatccgccgctccaccaccatctggaaatccgtttggtggattcggaaca
atgggaggagcatcgccagccgatattctcaacaatccggatgccgtgcggagcgttatg
gataacccaattactcagcagcttctcagcaacccagagttcatgcgaaccatcattcaa
tcgaatccaggtttccaggagatgatcgagagtaacccagaagttggtcatattctgaac
gatccaaatatcatgcgccagacgatggagatgattcgcaatcctaatatgtttcaagag
atgatgcgtaatcacgatcaggcaattagaaacttgcagggaattcccggcggagaagct
gcacttgagcgtctctacaacgatgttcaagaaccactcatgaatagtgcatctaactcg
ctcagaggaaatccattcgcgtctttgagaggtcaacaatcgaacgaaccacgtgtcgat
cgtgccggacaggaaaataatgaggctcttccaaatccatgggcttccaacaacagcagt
tcaaacaacgcgtcgaacaatagatcggctgattttaattcaatgatggattctcccgga
ttcggatcgcttatggaacagatgatgtcgaatccaagcatgcaggctagcatgttcagt
ccagaagttgtaaactcgattcgccagagtatgactaacaatccagcactaatagatgcg
gttatcggatctatgccaacagctcgtgacaatccacaaatcaccgagagtatccgccga
aacttcccacaaatgctctccatgatgtccgatccatcggtgatgcaagctatgcaaaat
ccacgtgtcagtcaggctttccgtcagattcaagacggattcgccacattgaggcaagag
gctccccagctgctgaacatgttccacgcacaagcgggacctggaatggaccagttgttc
gggaatgcagctgccaatgctgccgctggaaccacgggaactccgtccgctgcttcaact
gctgcaggtggtgttggaaatggaatgagtggtcttgctgatttgatcaggcacatgaat
atgggtggacggcaagccgccggcggcgctccagctgctgctgcaccagccaatccggaa
caaacctatgcttcgcaacttgagcaacttcaatcgatgggattctcggatcgtgctaga
aacattgcagccctcaccgctgcattcggagatctcaacgcggctgtcgaacgtcttctc
aactctccaccacagtaa
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