Caenorhabditis briggsae (nematode): CBG_10828
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Entry
CBG_10828 CDS
T01054
Symbol
Cbr-prp-31
Name
(RefSeq) Protein CBR-PRP-31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_10828 (Cbr-prp-31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_10828 (Cbr-prp-31)
Spliceosome [BR:
cbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CBG_10828 (Cbr-prp-31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
TMEM18
YibY
Motif
Other DBs
NCBI-GeneID:
8581992
NCBI-ProteinID:
XP_002639998
WormBase:
CBG10828
UniProt:
A0AAE9DUZ8
A8XBW3
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All DBs
Position
I:6581131..6582871
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AA seq
505 aa
AA seq
DB search
MSLAEELMADFDDDDDDDLEDIPDPAENFQGVKKEELDDDEIEEALEEAMDTSKYTSVHD
VAKLARSGEYLALVAQLGIELKRPQDEVKVTAPLEADPQYKLIVKLSHVAADIDNEINVI
HKFVRDKYEKRFPELETLVPNALNYLATVQLLKNDINSKALKEQLGSILDASTCMVVSVT
VSTTQGVKLEPDELKIVMDACDLAAQLHVNRIEMHQLVEWRMALIAPNLVALLGAATTAH
LVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSSVSTNPHHGFIYFHPLVQAMPPDLKNK
AAKILAAKVTLVARIDAQHESPNGEKGADFLALVNNKFEKMLEPPPVKANKALPKPLDKA
SKKRGGRRMRKMKERLGMTDLRKSANRMNFGELAEDVMQEHMGFDIGQVKTGNVTGGRIR
TAAVDQKTRARMSQKMMRQMEKQKANGGLTSIRSKMAGTASSVTFTPVQGLEIINPAAQE
QQQSSSTSNYFSSSGSFVNIDRMTL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgaggagcttatggctgatttcgatgacgacgatgatgatgatttggag
gacattccagatccagccgaaaatttccagggtgtgaaaaaagaggagcttgacgacgat
gaaattgaagaagcgttggaagaagcaatggatacgtcgaagtatacatcagttcacgat
gtagcgaaacttgcgagatccggagagtaccttgcactggttgctcagttgggaatcgaa
ctgaagcggccgcaagatgaagtgaaagtcacggctccactagaagcggatccacagtat
aagctcatcgttaagctatcacatgtcgcagcagatattgacaacgagataaatgtgatt
cacaaattcgttcgtgacaaatatgaaaaacgcttcccggaactcgaaactctcgtccca
aacgctctgaattatctggctaccgtacagcttctcaagaacgatattaacagtaaagcg
ttgaaggaacaacttggtagcattttggatgcatcaacatgtatggtcgtcagtgtcacc
gtctcaactacccagggagtgaagcttgaaccagatgagctgaagattgtaatggatgct
tgtgacttggctgcacagttacacgtaaatcgaattgaaatgcatcaactcgttgagtgg
agaatggccctgattgctccaaacctcgttgctctactaggtgcggcaaccacagctcat
ctcgtttcacaagcaggaggactatctccactcgctacgatgccttcctgcaacgttcaa
gttctgggaaagacgaagaaaaatctaattggtttctctagtgtttcaacaaatcctcat
cacggattcatttatttccatccattggtacaagcaatgcctcctgatctcaaaaacaag
gccgccaaaattcttgcggcgaaagtcacattagtagccagaattgatgcgcagcatgaa
tcaccaaatggagagaaaggtgcagattttcttgctctcgtcaataacaagtttgaaaag
atgttggaaccaccaccagtgaaggctaacaaagctttaccaaaacctttggataaggcg
agtaagaaaagaggaggaagacggatgagaaagatgaaagagcgtcttggaatgactgat
cttcgaaagagcgccaatcgtatgaattttggagagttggccgaagatgttatgcaggag
cacatgggattcgatatcggtcaggtgaagactggaaacgtgaccggaggaagaataaga
acagcagctgtcgatcagaagaccagagcaagaatgtcacaaaaaatgatgcgacagatg
gagaaacagaaagcgaacgggggtttgacaagtatccgaagcaagatggcaggaaccgca
tcttctgttactttcacacccgtccaaggtctggaaattatcaatccagctgcgcaagaa
caacagcaaagctcatcgacttccaactacttctcttcgtctggcagctttgtgaatatc
gaccgaatgacattgtaa
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