Caenorhabditis briggsae (nematode): CBG_11447
Help
Entry
CBG_11447 CDS
T01054
Symbol
Cbr-sptl-3
Name
(RefSeq) Protein CBR-SPTL-3
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00600
Sphingolipid metabolism
cbr01100
Metabolic pathways
Module
cbr_M00094
Ceramide biosynthesis
cbr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CBG_11447 (Cbr-sptl-3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_11447 (Cbr-sptl-3)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
CBG_11447 (Cbr-sptl-3)
Amino acid related enzymes [BR:
cbr01007
]
Aminotransferase (transaminase)
Class II
CBG_11447 (Cbr-sptl-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
8577202
NCBI-ProteinID:
XP_045094525
WormBase:
CBG11447
LinkDB
All DBs
Position
V:311715..313847
Genome browser
AA seq
513 aa
AA seq
DB search
MGGTQNGKAVANGRVKNGKITEKDTIPLEECPKPAFYVFWLVQLNITMMLLGAMVATLFD
KWGIVKTKRAKGDPRMEDFAPLGNSFDATYTDHIYRRSTDVVNRPISGVPGAIVRLKDRY
SDDHGWTQKYSGSETEVINLGSYNYLGFSHRSGVCADAAAAQIDKYGINCGGSRQECGNH
LSHKSVDRTIAEYLRVEDAVVFPMGFATNSMNIPALVDKGSLILSDRLNHASLVTGCRLS
GAHTLVFRHNNAKDCERKLRDALSGVSPKTGQKYNKVLIIIEGIYSMEGTIVDLPSFIAI
KKKYNCYLFLDEAHSIGAVGPSGRGVAEYWGCDPKDIDIMMGTLTKSFASAGGYMGGAKK
TIDHIRRYSAGTCYGVTMSPPLIAQVEKAVQIMCGQDGTDIGRQKAIQLLENSRYFRKEL
RKRGFLVYGNNDSPVVPLMTFYITKVVEFSRRMLKHNIGIVAVGYPATPLLEARVRFCLS
ADHTKEHLDYILEALEQVGAETNTFYGKKITDE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggactcaaaatgggaaagccgtggcgaatggaagagtgaaaaacggaaagata
accgagaaagacacgattccattggaagaatgcccaaaaccagcattttatgtgttctgg
ctggttcaattgaacatcaccatgatgcttctgggtgcaatggtcgccacactgttcgat
aaatggggaattgtgaagacaaaacgggcaaaaggagatcccagaatggaggactttgca
ccacttggaaacagcttcgatgccacgtacacagatcatatttatcgacgatcaaccgat
gttgtcaataggccgattagcggtgttccaggagctattgttaggctgaaagatagatat
agtgacgatcacggatggacacaaaaatactcgggtagcgaaacagaagtcatcaatctt
ggatcttacaattatctcggattctctcaccgatcgggtgtttgcgccgatgccgctgct
gctcaaatagataaatatggaataaattgtggaggatcgagacaggaatgcggaaaccat
ctttcccataaatcagtcgatcgtaccatcgctgaatacctgagagtagaggatgctgtc
gttttccctatgggtttcgccactaattcgatgaatattccggctcttgtcgacaaagga
tctcttattctttctgatcggctgaaccacgcatcgctggtcactggatgccgtttatct
ggtgcacacactttagtctttcgtcacaataacgctaaagattgtgaacgaaaattgcga
gatgctttgtctggagtgagcccgaagactggacaaaaatataacaaagtcctgattatc
attgaaggaatctacagcatggaaggaaccattgtcgatttgccatcgtttatcgctatc
aagaaaaagtataattgttatctttttctcgatgaagcacacagtatcggagcagtcggt
ccaagtggaagaggtgttgccgagtattggggatgtgatcccaaagatattgatattatg
atgggtactttgacaaagtctttcgcttcggctggaggatatatgggcggtgcgaagaaa
actatcgatcacattcgccgttattccgctggtacttgttacggagtgaccatgtcgcct
ccactcatcgctcaagtcgaaaaagcagttcagattatgtgcggccaagacggcacagat
atcggccgtcaaaaagccattcaacttctcgaaaattcccgatacttccggaaggaactt
cgcaaacgaggatttctagtttatggaaataatgatagtccagtagtgccattaatgaca
ttttatatcactaaagttgtcgaattttcacgacgaatgctcaaacataacattggaata
gtggcggtcggatatccagccactccactgttggaagcacgggttcgcttctgtttaagt
gccgatcacacaaaagagcatttagattatattctggaagctctcgagcaagtcggtgct
gaaacgaacacattttacgggaagaaaatcactgacgagtaa
DBGET
integrated database retrieval system
