Caenorhabditis briggsae (nematode): CBG_11595
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Entry
CBG_11595 CDS
T01054
Symbol
Cbr-cdt-2
Name
(RefSeq) Protein CBR-CDT-2
KO
K11790
denticleless
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_11595 (Cbr-cdt-2)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CBG_11595 (Cbr-cdt-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_EML
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
DUF2415
Motif
Other DBs
NCBI-GeneID:
8579725
NCBI-ProteinID:
XP_045094599
WormBase:
CBG11595
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All DBs
Position
V:14208432..14210808
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AA seq
699 aa
AA seq
DB search
MDFVKLPKMQNKYLRCPSSVYEDLESKHYMMPAGETDDHDTWVTSRFSPHWNQEHILYMG
DDPGNIGIFDVRKFQDRSVPLEERQLHFFPAHDGAIMDVVGVPNNESQIVSISGDSTIRC
WDLNQAPRDRKSQLFFGHEGSVRSISFSPNDPNVFVTGGRDFQVKVWDMRVSTVRKMEED
CRMATITYKTAHPKNTDKKLTSAGTPKSKAKSAKLEGHKVTSVIFLDENHVASASENAAS
GIRVWDIRKPTKNGLEHPSRVLNVPTSNKKSYGVTCLTLDRFGNRLFASCTDSSIFEYSV
PTASVSPSELENSFAYPNDNFSVNSYTGATIHNFYTQVSCSPISDTIACGSEDGRAVLWD
LQDQYVYMNDLSFPDEIDKRRSKLPKWSFGGHLKQVLNVGWSSRGNYFMSCDEGGVRIWT
EPRQKKSWKLFEEDDFPYPAPNHSDGFAYELVKPFELKESDAAMTGFDSISLSPRQRADS
GLVGGSPQKNRGSKRPIITSPFKSISSSPKPIRLGQSPRAKMFKMSQSPGTSPLKPTNSN
VQDMGYSTPRHKRSHRRKSPFHFEHPTEQMPNFVYDNFIKKLKGESEEPEDTRKSLTKTG
RKRIEDWWQTKGENVPTTGRARLPSISEFGKSACSKVLTETERNALNSPRKLLVLRTSQS
PCKIVTTPVSAPTKSIPMTPRKPTDKRPTSRNLFHYFKK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtaaaattacccaaaatgcaaaacaagtatctgcgatgcccatcttccgtc
tacgaagacctggaatcgaaacattacatgatgcctgctggagaaactgatgatcatgac
acttgggtaacgtccagattctcgccacattggaatcaagagcacattttatatatgggt
gatgatccaggaaatataggtatcttcgatgttcgaaagtttcaagatcgatcagtgccg
ttagaagagcgacagttacatttttttcccgcgcatgatggagcgattatggatgtggtt
ggtgttccgaacaacgaatcgcaaatcgtatcgatatcaggagattcaacaattcgatgt
tgggatctgaatcaggcgcctcgagatcgaaaatcgcaactttttttcggacatgaagga
tccgttcgatcgataagcttctctccaaatgatcccaatgtctttgttactggtggtcga
gattttcaagtgaaagtatgggatatgcgtgtatcgacagttagaaaaatggaagaagac
tgtcgaatggctacgatcacttataaaacagcacatccgaaaaatactgataaaaaatta
actagcgctgggacaccgaaatcaaaagcgaaatcggcgaaacttgagggtcacaaagtg
acaagtgtcatctttctcgacgaaaaccacgtggcaagtgcttctgaaaatgcagcgagc
ggtattcgcgtttgggatattagaaaaccaacgaagaatggattagaacatccatctcga
gtgctgaatgtgccgacgtcaaacaaaaagtcatatggagtcacatgtctcactttggat
cggtttggaaaccgactattcgcgtcgtgcaccgattcttcgatttttgaatattcggtc
ccaacagcatctgtatcaccgagtgagttggaaaattcatttgcctacccaaacgataat
ttttcagttaattcttatactggtgccaccatccacaacttttacacccaagtctcttgc
tctccgatatcggataccatcgcttgtgggagcgaagacggtcgtgcggtattatgggat
ctacaggatcagtacgtctacatgaatgacttgtcttttccggatgagatagataaacga
cggtcgaaactgccaaaatggtctttcggaggacacctgaagcaggtcttgaatgtggga
tggagctctcgaggcaactatttcatgtcttgtgatgaaggaggtgttcggatttggaca
gaaccaagacaaaagaaatcgtggaaactctttgaggaagatgatttcccgtatcccgcg
cccaatcacagcgatggatttgcatatgagcttgtgaaacctttcgaattgaaagaatcg
gatgcagcgatgacaggtttcgacagtatttctttatcaccaaggcaacgagccgactcc
ggattagtcggaggatcgccgcagaagaatcgtggatcgaaaagacctattattacaagc
ccatttaaatcgatatcttcaagtccaaaaccaatcagactaggtcaatcacctagagca
aaaatgtttaaaatgtcacaatccccgggtaccagtcctttgaaaccaacgaattccaat
gttcaagatatgggatacagtactccacgacacaagagatcgcataggaggaaatcacca
ttccattttgaacatccaaccgagcaaatgccgaatttcgtctacgataattttattaaa
aagttgaaaggagaatcggaagaaccggaagatactagaaagtcattgacgaaaacagga
cgaaaacgaatagaagattggtggcagacgaaaggagaaaatgtaccgacaacgggtaga
gcaaggttgccaagcatcagcgaattcggcaaatctgcttgctcaaaggttctaacagag
accgaaaggaatgctttgaattccccgcgaaagttattagtactccgaacgtcacaatct
ccatgtaaaatcgtcacaacacccgtttccgctccaacgaaatccataccgatgacacct
cgaaaaccgaccgataaacgaccgacgagtcgaaatttgttccattacttcaaaaagtag
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