KEGG   Caenorhabditis briggsae (nematode): CBG_11595
Entry
CBG_11595         CDS       T01054                                 
Symbol
Cbr-cdt-2
Name
(RefSeq) Protein CBR-CDT-2
  KO
K11790  denticleless
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbr04121]
    CBG_11595 (Cbr-cdt-2)
Ubiquitin system [BR:cbr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CBG_11595 (Cbr-cdt-2)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 Beta-prop_EML WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st DUF2415
Other DBs
NCBI-GeneID: 8579725
NCBI-ProteinID: XP_045094599
WormBase: CBG11595
LinkDB
Position
V:14208432..14210808
AA seq 699 aa
MDFVKLPKMQNKYLRCPSSVYEDLESKHYMMPAGETDDHDTWVTSRFSPHWNQEHILYMG
DDPGNIGIFDVRKFQDRSVPLEERQLHFFPAHDGAIMDVVGVPNNESQIVSISGDSTIRC
WDLNQAPRDRKSQLFFGHEGSVRSISFSPNDPNVFVTGGRDFQVKVWDMRVSTVRKMEED
CRMATITYKTAHPKNTDKKLTSAGTPKSKAKSAKLEGHKVTSVIFLDENHVASASENAAS
GIRVWDIRKPTKNGLEHPSRVLNVPTSNKKSYGVTCLTLDRFGNRLFASCTDSSIFEYSV
PTASVSPSELENSFAYPNDNFSVNSYTGATIHNFYTQVSCSPISDTIACGSEDGRAVLWD
LQDQYVYMNDLSFPDEIDKRRSKLPKWSFGGHLKQVLNVGWSSRGNYFMSCDEGGVRIWT
EPRQKKSWKLFEEDDFPYPAPNHSDGFAYELVKPFELKESDAAMTGFDSISLSPRQRADS
GLVGGSPQKNRGSKRPIITSPFKSISSSPKPIRLGQSPRAKMFKMSQSPGTSPLKPTNSN
VQDMGYSTPRHKRSHRRKSPFHFEHPTEQMPNFVYDNFIKKLKGESEEPEDTRKSLTKTG
RKRIEDWWQTKGENVPTTGRARLPSISEFGKSACSKVLTETERNALNSPRKLLVLRTSQS
PCKIVTTPVSAPTKSIPMTPRKPTDKRPTSRNLFHYFKK
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggactttgtaaaattacccaaaatgcaaaacaagtatctgcgatgcccatcttccgtc
tacgaagacctggaatcgaaacattacatgatgcctgctggagaaactgatgatcatgac
acttgggtaacgtccagattctcgccacattggaatcaagagcacattttatatatgggt
gatgatccaggaaatataggtatcttcgatgttcgaaagtttcaagatcgatcagtgccg
ttagaagagcgacagttacatttttttcccgcgcatgatggagcgattatggatgtggtt
ggtgttccgaacaacgaatcgcaaatcgtatcgatatcaggagattcaacaattcgatgt
tgggatctgaatcaggcgcctcgagatcgaaaatcgcaactttttttcggacatgaagga
tccgttcgatcgataagcttctctccaaatgatcccaatgtctttgttactggtggtcga
gattttcaagtgaaagtatgggatatgcgtgtatcgacagttagaaaaatggaagaagac
tgtcgaatggctacgatcacttataaaacagcacatccgaaaaatactgataaaaaatta
actagcgctgggacaccgaaatcaaaagcgaaatcggcgaaacttgagggtcacaaagtg
acaagtgtcatctttctcgacgaaaaccacgtggcaagtgcttctgaaaatgcagcgagc
ggtattcgcgtttgggatattagaaaaccaacgaagaatggattagaacatccatctcga
gtgctgaatgtgccgacgtcaaacaaaaagtcatatggagtcacatgtctcactttggat
cggtttggaaaccgactattcgcgtcgtgcaccgattcttcgatttttgaatattcggtc
ccaacagcatctgtatcaccgagtgagttggaaaattcatttgcctacccaaacgataat
ttttcagttaattcttatactggtgccaccatccacaacttttacacccaagtctcttgc
tctccgatatcggataccatcgcttgtgggagcgaagacggtcgtgcggtattatgggat
ctacaggatcagtacgtctacatgaatgacttgtcttttccggatgagatagataaacga
cggtcgaaactgccaaaatggtctttcggaggacacctgaagcaggtcttgaatgtggga
tggagctctcgaggcaactatttcatgtcttgtgatgaaggaggtgttcggatttggaca
gaaccaagacaaaagaaatcgtggaaactctttgaggaagatgatttcccgtatcccgcg
cccaatcacagcgatggatttgcatatgagcttgtgaaacctttcgaattgaaagaatcg
gatgcagcgatgacaggtttcgacagtatttctttatcaccaaggcaacgagccgactcc
ggattagtcggaggatcgccgcagaagaatcgtggatcgaaaagacctattattacaagc
ccatttaaatcgatatcttcaagtccaaaaccaatcagactaggtcaatcacctagagca
aaaatgtttaaaatgtcacaatccccgggtaccagtcctttgaaaccaacgaattccaat
gttcaagatatgggatacagtactccacgacacaagagatcgcataggaggaaatcacca
ttccattttgaacatccaaccgagcaaatgccgaatttcgtctacgataattttattaaa
aagttgaaaggagaatcggaagaaccggaagatactagaaagtcattgacgaaaacagga
cgaaaacgaatagaagattggtggcagacgaaaggagaaaatgtaccgacaacgggtaga
gcaaggttgccaagcatcagcgaattcggcaaatctgcttgctcaaaggttctaacagag
accgaaaggaatgctttgaattccccgcgaaagttattagtactccgaacgtcacaatct
ccatgtaaaatcgtcacaacacccgtttccgctccaacgaaatccataccgatgacacct
cgaaaaccgaccgataaacgaccgacgagtcgaaatttgttccattacttcaaaaagtag

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