Caenorhabditis briggsae (nematode): CBG_11720
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Entry
CBG_11720 CDS
T01054
Symbol
Cbr-snf-6
Name
(RefSeq) Protein CBR-SNF-6
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
CBG_11720 (Cbr-snf-6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_11720 (Cbr-snf-6)
Transporters [BR:
cbr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
CBG_11720 (Cbr-snf-6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
8582967
NCBI-ProteinID:
XP_045094654
WormBase:
CBG11720
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Position
III:<2310647..>2324106
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AA seq
709 aa
AA seq
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MSISSNEDRNGRGQVDMSLYPPFIRQLDAKLPDYTREGDIEYPFEEITGVGDENRIRGNW
SNKSDYLLAVIGFTAGVGSFWKFPFLVFQNGGAAFLVPYLAMLCLAALPMFFMEMVLGQF
SSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNCQNS
WSGENCTLGTRIQCREMNGTLLVNGSCIVEHATSNKTTVIPLHDLDSIPSLKYFHNDVLM
LSKGVDDFGTLNWYLGLCVLVCWIAVFLCLFQGVKSSGKVVYISVIFPFIILTVLLTRLL
TLDGSISAVLYFLTPKWAVLKDLHVWGEAAVQAFYSVSCCSGGLFTIASYSRFHNHLYKD
ICLVLIVDVIVSLIGCILTFSAIGFTCFEFAIALDKFHIRDGFHLVFVFLAEALAGVPVA
PLYAGLFFIMILLVVHATQMFVVETIVSSLCDEYPERLRRNRRHVLTTVCALFICLSIPF
CLSSGLYWMELLTQFVLTWPLVVIAFLECMAINWIYGVDNMLDNAKWIVGHWPPCYIFWK
ILFKFICPLVYLSILCFLWLDWNSIEYESYQFPYWSILAAWGIASLPLLLIPIIGSWQFC
IAKGSITQKWWRVLYPDDAWGPALAIHRAEKFPLQIPEARRLLLPPEVEIASSQRDLQEN
IQMNGGGPLTGARSSEFGHQTDGKSIRSDVKSVGATINTIPKFERETAI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttcgagtaacgaagatcgaaatgggcggggccaggtggatatgagcctatat
ccaccgttcatcagacagctagacgcaaaactgccggactacactagagaaggagatatc
gaatatccgtttgaggaaatcacaggtgttggagatgagaataggataagaggaaattgg
agcaacaaatcggactatttgttggctgtaattggatttacagctggtgtgggaagcttc
tggaaattcccatttttggtatttcaaaatggcggagccgcgttcctggtaccgtacctc
gccatgctatgtctcgccgcacttccaatgttctttatggaaatggtcttgggacaattc
tcatcatcagctgcaattagtgtatggaaagtggtaccgttgtttaagggtattggattt
gcccaagtgacaatatccggattcttcgccgtcttcttcaacatcatctcggcgtggacc
ctattttatctgattaactcattcagcttctcgatcccatggtcaaattgtcagaattcg
tggtctggagagaactgcaccctgggtacccgcattcaatgtcgtgaaatgaatggaaca
ctgctagtgaatggaagttgtattgtggaacatgcgacatcgaacaaaactacagtaatc
ccactgcacgatttggattcgattcccagtttgaaatattttcataacgacgtattgatg
ttatcaaaaggagtcgacgattttggaacactgaattggtatctgggactttgtgttctc
gtctgctggatcgctgtgtttttgtgcctgtttcaaggggttaagtcgagtggaaaggta
gtctacatttcggtgatattcccgttcataatacttaccgtactcctcacacgtcttcta
acattggatggatcgatttctgcggttttatattttctaacaccaaaatgggcggtactg
aaagatctacatgtttggggagaggctgccgtccaggcattctactcggtttcgtgttgt
tccggtggattattcacaattgccagttattcgagatttcataaccatttgtacaaagat
atctgccttgtgctgattgtggacgtgatcgtatcactaatcggatgtattctaacattc
tctgccatcggattcacttgtttcgaattcgcgatcgctttggataaattccacattcga
gacggattccatttggtttttgtgtttttagccgaagcgttggcaggtgtcccagttgct
cccctctacgctggcctcttcttcataatgattcttctggtggtccatgcgacccagatg
ttcgtagtggaaacgatagtatcctctctttgtgacgagtatccagaacgactccgtcgg
aatagaagacacgtactgactacagtatgcgccctattcatatgtctctcaattcccttt
tgcttgtcttctggattgtattggatggagctgctcactcaatttgtgctcacatggcct
ctggtagtcattgccttcttggaatgtatggctattaactggatctacggtgtcgataat
atgttggacaatgcgaaatggattgtgggacactggccaccttgttatatcttttggaag
atcctcttcaaattcatctgtccactggtctatttgtcgattctttgtttcctctggctg
gattggaattcaatagaatacgaatcatatcaattcccatattggtcgattctagcggca
tggggaatcgcctctctcccgctattgctcattccaattattggaagttggcaattctgt
attgccaagggatcaataacacagaaatggtggagagtactgtatccggacgacgcatgg
ggacccgcactagcaattcatagggctgagaagttcccgttgcagattccggaagcacga
cgattgttattacccccggaagtggaaatcgcgagctcgcagagggatttacaggaaaac
atccaaatgaacggtggaggaccactaaccggcgcccgctcatcggaatttggacatcaa
accgatggaaaatcgataagatctgatgtgaagagtgttggagcgacgatcaatacgata
ccaaaatttgaacgagaaacggcgatttag
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