Caenorhabditis briggsae (nematode): CBG_11756
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Entry
CBG_11756 CDS
T01054
Symbol
Cbr-snr-6
Name
(RefSeq) Protein CBR-SNR-6
KO
K11097
small nuclear ribonucleoprotein E
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_11756 (Cbr-snr-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_11756 (Cbr-snr-6)
03041 Spliceosome [BR:
cbr03041
]
CBG_11756 (Cbr-snr-6)
03032 DNA replication proteins [BR:
cbr03032
]
CBG_11756 (Cbr-snr-6)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CBG_11756 (Cbr-snr-6)
Spliceosome [BR:
cbr03041
]
Complex A
U1 snRNP components
Sm proteins
CBG_11756 (Cbr-snr-6)
U2 snRNP components
CBG_11756 (Cbr-snr-6)
Complex B
U1 snRNP components
CBG_11756 (Cbr-snr-6)
U4/U6.U5 tri-snRNP components
CBG_11756 (Cbr-snr-6)
Complex C
U2 snRNP components
CBG_11756 (Cbr-snr-6)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CBG_11756 (Cbr-snr-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
8582999
NCBI-ProteinID:
XP_002641005
WormBase:
CBG11756
UniProt:
A8XDT0
A0AAE9EH66
LinkDB
All DBs
Position
III:2058212..2058733
Genome browser
AA seq
90 aa
AA seq
DB search
MSQRKIQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV
NMKTKGRNKIGRILLKGDNITLIHAAAQEA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagagaaagattcagaaggtcatggttcagccagtgaacctcatcttcagatat
ctccaaaaccgcacgcgcgtccaaatctggctctacgaagacgtgacccaccgtctcgag
ggatacatcatcggattcgacgaattcatgaatgtggtgttcgacgaggccgaagaggtc
aacatgaagacgaagggacgcaacaagatcggtcggatcctgctcaaaggagacaacatc
actctgatccatgccgctgctcaggaggcttga
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