Caenorhabditis briggsae (nematode): CBG_11946
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Entry
CBG_11946 CDS
T01054
Name
(RefSeq) Protein CBG11946
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04310
Wnt signaling pathway
cbr04330
Notch signaling pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
CBG_11946
04330 Notch signaling pathway
CBG_11946
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_11946
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_11946
Peptidases and inhibitors [BR:
cbr01002
]
Aspartic peptidases
Family A22: presenilin family
CBG_11946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
MCLC
Motif
Other DBs
NCBI-GeneID:
8588242
NCBI-ProteinID:
XP_045094709
WormBase:
CBG11946
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Position
I:7248956..7251909
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AA seq
483 aa
AA seq
DB search
MLRSMLTELRRSSQLQWTLFSVVVNMSLTLAIWIGIYHMEVNSELSKMYFLDDSFNWTTG
NPALDGLINGFCTILVLGCVSFVMLAFVLYDFRRIVKSWLTFSCLLILFGVSGQTIYDLF
SQIFDQNDENQFILTVALTVIPTVVYGCLGIYAFLANGSLLLHQFFVVSNCSLIAVFYLR
AFPKHTTWFVLWTVLFWDLFAVLAPMGPLKKVQEKASDYSNNILKILMFAAEDKRESAGM
DMAQDSQENLNDERKLRKDVKELIQLYSKQDEKDDEFLQKIRQRRNAINPDSGSTAHSPM
VTTEPSPIVLKEKNSDEELFDNESDTTESSSESSTSSESVFSSSDVSTAAECAPEEWNEL
IHQQNEFDQNDATVTAADALNDGVKSKNSGRLFSEICRFPETVRLGFGDFVFYSLLIGQA
ATGGCPISVGFAAFGILFGLIATLTVLSSEESTTPALPLPVICGTFCYFVSRFLVDSIQE
FWV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctcgatgctcactgagctccgacgctcgtctcaactgcaatggacactgttt
tcagtggttgtgaatatgtcattaactctggcaatttggattggaatctatcatatggaa
gtgaattctgagctcagtaaaatgtactttttggatgattcgttcaattggacaaccggg
aatccggcgttagatggattgatcaacggcttctgtaccatcctggttctcggttgtgtc
tctttcgtgatgcttgctttcgttctttacgatttccgtcgaatcgtcaaatcatggctc
acattttcgtgtcttctgatccttttcggtgtttctggacagacgatttatgatttattt
tctcagatttttgatcaaaatgatgagaatcaattcattttgacagtggcattgactgta
attccaacagttgtctatggatgtttgggcatttatgcattccttgccaacggatcactc
ctacttcatcaatttttcgtcgtctccaactgttcattgatcgcagttttctatctccga
gcatttccaaaacacacgacttggtttgtcctgtggactgttcttttttgggacttgttc
gcagttctcgccccaatgggaccactcaaaaaagtccaagaaaaagcgtccgactacagt
aataacattctgaaaatcctcatgtttgccgcagaagacaaacgagagagtgctggaatg
gatatggcgcaggattctcaggaaaatttgaatgacgaaagaaaacttcgaaaagatgta
aaggaattgattcagttgtattcgaaacaggatgaaaaggatgacgaattcctacaaaaa
atccgacagagaaggaatgcgattaatccggattcaggaagcactgcgcatagtcccatg
gtgaccaccgaaccatcgccaattgtcctgaaagagaagaacagcgatgaagagttattc
gataatgaatctgatacaacagaatcatcttctgaatcctcaacgtcatctgaatctgtg
ttctcatcatctgatgttagtactgctgccgaatgtgctccagaagagtggaatgagttg
attcatcaacaaaacgaatttgatcagaacgatgctacagtaactgctgctgacgctttg
aatgatggagtcaaatcgaaaaattctggaagactgttttctgagatatgccgatttcca
gaaactgttcgtcttggattcggagactttgttttctatagccttctaattggacaagca
gccactggtggatgcccgatttctgttggattcgccgcttttggaattctttttggtctt
attgcaacccttactgtactttctagcgaagagtccacgactcctgctttgccattacct
gtcatctgtggaactttttgctatttcgtttccagatttttggtcgattcgattcaggaa
ttttgggtctag
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