Caenorhabditis briggsae (nematode): CBG_12004
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Entry
CBG_12004 CDS
T01054
Symbol
Cbr-ptr-2
Name
(RefSeq) Protein CBR-PTR-2
KO
K24682
patched domain-containing protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
CBG_12004 (Cbr-ptr-2)
Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
Other domain-containing proteins
Patched domain-containing proteins
CBG_12004 (Cbr-ptr-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
8588295
NCBI-ProteinID:
XP_045094727
WormBase:
CBG12004
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Position
I:complement(7457442..7460518)
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AA seq
948 aa
AA seq
DB search
MAWDCVERRAASLFRQLGFFVCDHPLPFIVFPLLFTTAMGVGLLHLNPLSDAVYLFTPIG
AQSKMERMSIHEKWPLTDNNYIPGRAVTQSREIQVTALARNDSNILDTKFANAVYQLDKY
IQTRVRVLHNGHYYSYKNLCLQYKNGGCPSNKHVHILSDLYNHGFNITYPYFRFGSEGGY
IGSSLGGVTVMKGENETDILASAKAWFMIYHLKFHPEEMSYISGEWELELGRMLKDYPED
PYISITYFHSQTLADELKRNADTLVPRFVISFTLLVVFSTLCSLCFIDGSFSIDWVLSKP
ILSILGVVNAGIAILTGIGCLSLIGMPYNDIVGVMPFLVVAVGTDNMFLMVAAVRRTSRT
HTVHERMGECMADAAVSILITSSTDVLSFGVGTITTIPAVQIFCVYTGVAIFFAFLYQIT
FFAACLALAMKHEAAGRNSMFFVESVPAEKRKSLSTFQRIFNMGSVPDHSSSNDVKQPLT
SRFFGEWYAPVLMNPFVRGIAMVWFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHYR
LLEKYFWKYGQQVQIVINNAPDLRNHTSRDRVHAMVLDFATSKHAIGMESVQFWLFEMER
YYQKELQVQIIDSSFYGLLQHFLASKTNNPLAEDIYWGPMPDDDNGTMVQSFRFIVGMKD
LVTTMDQTDATMSFRDVAARWPEFNVTTFMPIWMFTDQYIIIIPNTVQNIIIALLVMIVI
AVLFIPQPMCSLWVALACASIDFGVIGYMTLWGVNLDAISMITIIMSIGFSVDYSAHIAY
GYVVSTRDTATGRVQEALSALGWPLFQGAMSTIIAVSVLADIPAYMIVTFFKTVIYLLKV
SRHIGFFQVVLSISLGLLHGLVFLPVLLSIFVRGCCIIPSSPHNHHSAQKVEKQMKIAAI
TSSPLHLQTVAPIRASSPISFPHRFEYTDDSPTVHNRSKSSMKSEHLD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggactgtgtggagcggcgtgcggcgtcgctgttccgacagctcggatttttc
gtttgtgatcatccacttccgtttatcgtatttcctcttttgttcacaactgcaatggga
gtcggtcttcttcatctgaatccattatctgatgcggtttatctattcacacctatcgga
gcacaaagtaaaatggagcgaatgtcgattcatgagaaatggccacttactgataacaat
tacattccgggacgagctgtaacacagagtcgagaaattcaagtgacagctcttgcgaga
aacgattcaaacatattggatacaaagtttgcgaatgcggtttatcaactggacaagtac
attcaaactagagttcgtgtgcttcacaatggtcactattatagttataaaaacctgtgt
ttgcaatacaaaaatggcggatgcccttctaacaaacatgtccatattctttctgatttg
tacaatcatggattcaatatcacttacccgtatttccgctttggatccgagggcggctat
attggaagcagtttaggaggagtgacagtgatgaaaggagagaatgaaacggatattctt
gcctctgctaaagcgtggttcatgatttatcatttgaaatttcatccagaagaaatgagt
tatatatctggagaatgggagcttgaattgggaagaatgctgaaagactatccagaggat
ccgtatatttccatcacctacttccattcacaaacactagcagatgagctgaaacgaaac
gctgatactttggttccccgtttcgttatatctttcactttgcttgtcgttttttcaacc
ctctgttcgttatgcttcatcgatggatcgttttcgattgactgggtcctttccaaacca
attttatctattcttggagttgtgaatgccggaattgctatcctaactggaatcggatgt
ctttcactcattggaatgccctacaacgatattgtcggagtcatgccattcctcgtcgtt
gccgtaggaacggacaacatgtttctgatggttgctgctgttcgacgaacatcaagaacc
catacagtgcatgagcggatgggagaatgtatggcagacgctgccgtttctattctgatc
acttccagcacagatgttttgtcgtttggtgttggtacaattactacaattccagccgtt
caaattttctgtgtctacaccggagtcgctattttctttgccttcctttatcagatcact
ttcttcgctgcttgcttggcacttgctatgaagcatgaagcagctggacgtaactccatg
ttctttgtagaatctgttccggccgagaagagaaaatcactgagcacgttccaacgaatt
ttcaacatgggaagcgtccctgatcattcatcgtccaacgatgtgaaacaaccattaacc
tcgcgattcttcggagaatggtacgctcctgtcctcatgaatccatttgttcgtggaatc
gcaatggtgtggtttgtgatctacctactaggtgcgagttacggatgttctcgaatcaaa
gaagggttggaacctgttaacttgctcgtcgaagactcttatgctattccacattatcgg
cttttggagaaatacttctggaaatatggacaacaagtgcaaatcgtgatcaataacgct
ccagatcttagaaatcacacatcaagggatcgagttcatgcgatggttcttgattttgcc
actagcaaacatgccattggaatggaatcggttcaattttggcttttcgaaatggaacga
tactaccaaaaggaattgcaagttcaaataatcgactcttccttttatggacttcttcaa
catttccttgcttcaaagactaacaatccactggcagaagatatttactggggaccgatg
ccagacgatgataatggtacaatggtgcagagcttccgattcatagttggtatgaaggat
ttagtaacgacgatggatcagacggacgctacaatgtcttttagggatgtcgccgctcgg
tggcccgaattcaatgtaacgacattcatgccgatttggatgttcaccgaccaatacatt
atcatcatccctaacactgttcagaacattatcattgctcttctcgttatgatcgtcatc
gctgtgctcttcattccccagccaatgtgctctctgtgggttgcactagcatgcgcatct
attgacttcggagttattggatatatgactctgtggggtgtcaacctggatgcgatttca
atgattacaattatcatgtcgatcggattctcggtcgactattctgcacatattgcgtac
ggctacgtagtttccaccagagacaccgccacaggcagggtgcaggaggcattatccgca
cttggatggccacttttccagggagcaatgtcaacaattattgcagtttctgttcttgct
gacattcccgcatacatgattgtaacatttttcaaaacggtaatttatcttttgaaagtc
tcccgtcatattggtttttttcaggtggtcctatcaatttcacttggccttcttcacgga
ttagtcttcctaccagtcttgctatcaattttcgttcgtggttgttgcatcattccaagc
tcaccccataaccatcatagtgctcagaaagttgaaaagcaaatgaaaattgctgcaatc
acatcaagcccacttcacctacaaacggttgcacctatcagggcatcttcacctattagc
tttcctcatagattcgaatacacagatgactcgccaacagttcataacaggtcaaaatcg
tcgatgaaatcggaacatctagactag
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