Caenorhabditis briggsae (nematode): CBG_12064
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Entry
CBG_12064 CDS
T01054
Name
(RefSeq) Protein CBG12064
KO
K27103
serrate RNA effector molecule
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_12064
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
CBG_12064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
DUF7390
Motif
Other DBs
NCBI-GeneID:
8588347
NCBI-ProteinID:
XP_002646350
WormBase:
CBG12064
UniProt:
A8XEG9
A0AAE9DTB2
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Position
I:complement(7675324..7677910)
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AA seq
715 aa
AA seq
DB search
MDSDDDGDRRRDKFARERRDDDSYRRSGGGGGGYSRYDNKRPAGRREDYQVKRSRGDEGD
DGFDPVRGDRNGNGAEPSSENSIYSGPLLPFKRFLTNQEDDISEEDAIKKYNEYKNEHRK
FQLDRFFRAHKDEEWFRLKYKPEEAKKVKEVQLENVQKRLQIFNELKEQGQFDKFTLDFE
DAEAILRMLDSVVVKLENGSEDDLKAVLAQKLDDESLADVKKENKDAAEKVEDQVKDEVK
EEPNEEQEEGAIDDETDKASNKVNIHKTCSVFLRNIPPGLTYEELESTCKKYPGFLRLAL
TDGIAERRFYRRGWATFKRDVNIKEICWGLNAHRLRETDLNAIINRDITRRVRTNNGVAA
HKQVALNDLKLAVKLTALYDKKLGLFNAADESESDREKDIRMGVDLVAASTNPLVKEIKS
IVPKDTLNDISEEEAELLGVSNGGDSQSDKVRYERDDTILKALDLLIIYLRIVHSIDFYN
HGHYAQEDSMPNRCGLIHVRGQPPSGASINTDENGDLIVPQKFINDFISGFNSRIDKGLI
EKQYVSEEDMEKMGKKDGEKEVEAFIAINTVELAKDKWLCPLSGKKFKGPEFIRKHLQSK
HEDKLEEARAEADFFNNYLADAQRPVDLEPKHMPHMSRDDHRGGGGDRGYGRERDDDRGP
GGGRSSFGNGSYDRRPPFPPRHSLGGRGGGGRMFDDAPRRQPVSYRDLDAPDDIP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatgatgatggtgaccgtcgccgcgacaagtttgctagagagcgccgggac
gatgacagctataggagaagcggtggcggaggcggcggttattctcgctatgacaacaag
agaccagcaggaagaagagaggattatcaagtgaaaaggagccgtggagacgaaggagac
gatggatttgatccagtccgtggtgatcggaatggtaacggtgccgagccgtcatcagag
aatagtatttattccggtcccttgttaccgtttaagagattccttactaatcaggaagat
gacatttctgaagaagatgcaatcaaaaagtataatgagtacaaaaacgaacacagaaag
tttcaacttgaccggtttttccgtgctcataaagacgaagaatggttccgtctcaagtac
aagccggaagaggctaagaaggtcaaagaggttcaattggagaacgttcaaaaacgtttg
cagattttcaatgagcttaaggaacaaggacagtttgataagttcaccttggattttgaa
gatgctgaagcaatccttagaatgttggactcggtggtcgttaaacttgagaatggctca
gaggacgacttgaaagctgttttggctcaaaaactagacgatgaatcgcttgccgatgtt
aaaaaagaaaacaaggatgccgccgagaaagttgaggatcaagtgaaggacgaagtgaag
gaggaacccaatgaagagcaggaagaaggcgcgattgacgatgaaactgacaaagcttcg
aacaaggtcaatatccataaaacctgttctgttttcttgagaaatatcccgccagggttg
acttatgaggagttggaaagtacgtgcaagaagtatccagggttcctccgacttgctctt
actgatggaatcgctgagagaagattttatagaagaggatgggctactttcaagcgggat
gtcaacatcaaagaaatttgttggggactcaatgcacatcgtctccgtgaaactgaccta
aacgccatcattaatcgcgatataactcgtcgtgtccgcaccaacaatggcgtcgctgct
cataaacaagttgctcttaacgacttaaaactggctgtgaagctaacagctctttatgat
aaaaagcttggcttgtttaatgctgccgatgaatcggaatccgatcgcgaaaaggatatt
cgcatgggagttgacctggtagctgcatcaaccaatccccttgtcaaggaaatcaaatcc
atcgtaccaaaagataccttgaatgacattagtgaagaagaagccgaactattgggggtt
tcgaacggtggcgactcacaatcggacaaggttagatacgaaagagacgatactatttta
aaagctcttgatcttctcattatctatcttcgtattgttcattctattgacttctacaat
cacggtcattatgctcaagaggattccatgcccaacagatgcggtctgattcatgtacgt
gggcagccaccttccggagcttctataaatacggatgagaatggagatctaattgttcca
caaaagttcatcaatgacttcatctcgggattcaattctcgtatcgacaaagggctaata
gagaagcagtatgtcagtgaggaagatatggagaaaatggggaaaaaagatggcgaaaaa
gaagttgaagcttttatcgctatcaacacggttgaacttgctaaggataaatggctttgc
ccgttgtccgggaaaaagttcaaaggtcctgagttcattcgtaagcatttacaatcgaag
catgaagacaaactggaagaagccagagcagaagccgacttcttcaataattatctggcg
gacgcgcaacgtcctgtagatttggagcccaaacacatgccccatatgtcacgcgatgat
caccgtggtggaggtggtgatcgtggatacggaagagaacgtgatgacgatagaggtcct
ggtggaggaagaagctcttttggcaatggatcgtatgatagacgtccaccatttccacct
cgtcacagtctcggaggacgcggtggcggcgggcgaatgttcgatgatgccccgcgtcgc
cagccagtatcgtaccgggatttggacgcacccgatgacatcccataa
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