Caenorhabditis briggsae (nematode): CBG_12068
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Entry
CBG_12068 CDS
T01054
Name
(RefSeq) Protein CBG12068
KO
K03440
acid-sensing ion channel, other
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_12068
Ion channels [BR:
cbr04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
CBG_12068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
FAM76
SCIFF
Motif
Other DBs
NCBI-GeneID:
8588351
NCBI-ProteinID:
XP_045094748
WormBase:
CBG12068
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Position
I:complement(7694080..7699555)
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AA seq
736 aa
AA seq
DB search
MILECFSLTGHLQRSCISIHNIRLLNRQTLNRPDNFLEEKNTIIIILKMALNRRGCLSSK
YLEFTASSSKQFANQLVIEVPVNTYKNAKKIKGVGSAHRETKHFSSTTTMHGPKRIFYGK
GVARAFWILIVGLALAMLCFQIFVLLQMYFSKPTLSQVSFIVNEGGMDFPAVTVCNFNPI
KKSYVRELNASGDLTGETLEYLLQTNMDAMFVFSNLDRHNLKKSEIIWEKIERQKCGISA
HDEAETYFQNHTDFQIINFLRTAGYDCGEMFLTCYFGGRRFDCCKYMKPKVTSLGKCWEL
DLQNLAPEWMRKQISPGSEAGLQMIVDAQLEEELRGENGDAKAIFSDIYENGFRYYIHPP
GANAELSSEGISVSPSRTVYSAIKTVSHNLLSRRNWGNCSEHWPGHYDTFLYYSASACRA
LCIAQHFNNTCGCAPFTYNVDGKKKICAPYESITCMDEYMLRKVNGTDYLELPDCTECHM
ECQSTSYTSYNSYGDGFNRGSLEWLKKISNKTESHIKSNVAVINIFFLEMFYTSYSQVQA
TSLTEILSDIGGNMGMFLGMSVITITELTLFFSKIFWIMVSKRRRQYMYSKKKNEKEKEQ
QLDDAVKEFQERRSRRNSRENISALSNYSNRIMPIEEFQKKFAYKNGNSEENLSSASLDS
VIELKFDINELRRQLNQQSSDGIARIRLPNQTTRPNSTNLENYSSTPPIFTIEPSSRRSS
QTPSPPSKPPNSQSPK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgatacttgaatgtttcagtctgaccggtcatttgcagcgatcatgtatttcgatccac
aacatccgtctactaaaccgccagacgctgaaccgtcccgacaactttctggaggagaag
aatacgataataatcattctaaagatggcactgaatcgaagaggttgtctctcgagcaaa
tatctcgaattcacggcatcatccagcaagcaatttgcaaatcaactggtcatcgaagtg
cctgtcaatacgtacaaaaatgcgaaaaagatcaaaggagttggatctgctcatcgcgag
acgaaacacttttcaagtacaaccacaatgcacggtccaaaaagaatattttatgggaaa
ggagttgctcgtgcattttggattctcatcgttggactcgcgttggcaatgttatgcttt
cagattttcgttcttcttcagatgtacttttcgaaaccaacattatcacaagtttcgttc
attgtgaatgagggaggaatggattttccagctgtcactgtttgcaatttcaacccaatt
aaaaaatcatatgtacgagaattgaatgcatctggagatttgacaggggaaacgttagaa
tatcttctacagacaaacatggatgcaatgtttgtgtttagtaatctagatcggcataat
ttgaaaaaaagtgagatcatttgggaaaaaattgaaagacaaaagtgtggaatttcagca
catgacgaagcggaaacatactttcaaaaccatacagactttcaaatcattaattttctg
aggaccgctggatacgattgtggagaaatgtttctgacatgttatttcggaggaagaaga
tttgattgctgtaaatacatgaaaccaaaagtcacatcactaggaaaatgttgggaactg
gatcttcaaaatctggcgcctgaatggatgcgaaaacaaatatctcctggaagtgaagca
gggcttcaaatgattgttgatgcacaattggaagaagaattaagaggagaaaatggagat
gcaaaagcgattttctcagatatctatgaaaatggattcagatattacattcatccgcca
ggagcaaatgctgagttgtcatcagaaggtattagtgtttccccttcaagaactgtttac
tctgctatcaaaactgtctcgcacaatctgttgagtcgtcgaaattggggaaactgttcg
gagcattggccagggcactacgatactttcctttactattccgcatccgcatgtcgtgct
ctttgcattgctcaacacttcaataacacatgtggatgtgctccattcacttacaatgtt
gatggaaagaagaagatttgtgctccttacgagtcgataacttgtatggatgaatatatg
cttcgaaaagtgaatgggacggattatttggaattgccagattgtacagagtgtcatatg
gaatgccaaagtaccagttatacatcatacaattcttacggagatggattcaacagagga
tcgttagagtggttgaaaaaaattagtaataaaacagaatcgcatatcaagagcaatgtg
gcagtcatcaatatattctttttggagatgttctacacttcttactctcaagttcaagca
acatctcttaccgagattctatcagatattggtggtaacatgggaatgttcctgggaatg
tcagttatcacaatcactgaactaactttgttcttctcaaagattttctggattatggtt
tcgaagagaagaaggcaatacatgtactcaaagaaaaagaacgagaaggaaaaagaacaa
caactggatgatgcagtcaaagagtttcaagaacgaagatctagaagaaattctagagag
aatatatcggcactcagcaactacagtaaccgaataatgccgattgaagaattccaaaag
aagtttgcttacaaaaacgggaattcagaagaaaacctttcgtcggctagtttggacagt
gttattgagctgaaattcgacatcaatgagttacgtcgccagttaaaccagcaatcttcg
gatggcatcgccagaatccggttaccaaatcagacaacacgtcccaactcgacaaatcta
gaaaattattcatcaactcccccgattttcacaatagaaccgagctccagaagatcctct
caaacgccatctcctccttcgaaacctccgaattctcagtcaccgaaataa
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