KEGG   Caenorhabditis briggsae (nematode): CBG_12068
Entry
CBG_12068         CDS       T01054                                 
Name
(RefSeq) Protein CBG12068
  KO
K03440  acid-sensing ion channel, other
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cbr04040]
    CBG_12068
Ion channels [BR:cbr04040]
 Ligand-gated channels
  Acid-sensing ion channel (ASIC)
   CBG_12068
SSDB
Motif
Pfam: ASC FAM76 SCIFF
Other DBs
NCBI-GeneID: 8588351
NCBI-ProteinID: XP_045094748
WormBase: CBG12068
LinkDB
Position
I:complement(7694080..7699555)
AA seq 736 aa
MILECFSLTGHLQRSCISIHNIRLLNRQTLNRPDNFLEEKNTIIIILKMALNRRGCLSSK
YLEFTASSSKQFANQLVIEVPVNTYKNAKKIKGVGSAHRETKHFSSTTTMHGPKRIFYGK
GVARAFWILIVGLALAMLCFQIFVLLQMYFSKPTLSQVSFIVNEGGMDFPAVTVCNFNPI
KKSYVRELNASGDLTGETLEYLLQTNMDAMFVFSNLDRHNLKKSEIIWEKIERQKCGISA
HDEAETYFQNHTDFQIINFLRTAGYDCGEMFLTCYFGGRRFDCCKYMKPKVTSLGKCWEL
DLQNLAPEWMRKQISPGSEAGLQMIVDAQLEEELRGENGDAKAIFSDIYENGFRYYIHPP
GANAELSSEGISVSPSRTVYSAIKTVSHNLLSRRNWGNCSEHWPGHYDTFLYYSASACRA
LCIAQHFNNTCGCAPFTYNVDGKKKICAPYESITCMDEYMLRKVNGTDYLELPDCTECHM
ECQSTSYTSYNSYGDGFNRGSLEWLKKISNKTESHIKSNVAVINIFFLEMFYTSYSQVQA
TSLTEILSDIGGNMGMFLGMSVITITELTLFFSKIFWIMVSKRRRQYMYSKKKNEKEKEQ
QLDDAVKEFQERRSRRNSRENISALSNYSNRIMPIEEFQKKFAYKNGNSEENLSSASLDS
VIELKFDINELRRQLNQQSSDGIARIRLPNQTTRPNSTNLENYSSTPPIFTIEPSSRRSS
QTPSPPSKPPNSQSPK
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgatacttgaatgtttcagtctgaccggtcatttgcagcgatcatgtatttcgatccac
aacatccgtctactaaaccgccagacgctgaaccgtcccgacaactttctggaggagaag
aatacgataataatcattctaaagatggcactgaatcgaagaggttgtctctcgagcaaa
tatctcgaattcacggcatcatccagcaagcaatttgcaaatcaactggtcatcgaagtg
cctgtcaatacgtacaaaaatgcgaaaaagatcaaaggagttggatctgctcatcgcgag
acgaaacacttttcaagtacaaccacaatgcacggtccaaaaagaatattttatgggaaa
ggagttgctcgtgcattttggattctcatcgttggactcgcgttggcaatgttatgcttt
cagattttcgttcttcttcagatgtacttttcgaaaccaacattatcacaagtttcgttc
attgtgaatgagggaggaatggattttccagctgtcactgtttgcaatttcaacccaatt
aaaaaatcatatgtacgagaattgaatgcatctggagatttgacaggggaaacgttagaa
tatcttctacagacaaacatggatgcaatgtttgtgtttagtaatctagatcggcataat
ttgaaaaaaagtgagatcatttgggaaaaaattgaaagacaaaagtgtggaatttcagca
catgacgaagcggaaacatactttcaaaaccatacagactttcaaatcattaattttctg
aggaccgctggatacgattgtggagaaatgtttctgacatgttatttcggaggaagaaga
tttgattgctgtaaatacatgaaaccaaaagtcacatcactaggaaaatgttgggaactg
gatcttcaaaatctggcgcctgaatggatgcgaaaacaaatatctcctggaagtgaagca
gggcttcaaatgattgttgatgcacaattggaagaagaattaagaggagaaaatggagat
gcaaaagcgattttctcagatatctatgaaaatggattcagatattacattcatccgcca
ggagcaaatgctgagttgtcatcagaaggtattagtgtttccccttcaagaactgtttac
tctgctatcaaaactgtctcgcacaatctgttgagtcgtcgaaattggggaaactgttcg
gagcattggccagggcactacgatactttcctttactattccgcatccgcatgtcgtgct
ctttgcattgctcaacacttcaataacacatgtggatgtgctccattcacttacaatgtt
gatggaaagaagaagatttgtgctccttacgagtcgataacttgtatggatgaatatatg
cttcgaaaagtgaatgggacggattatttggaattgccagattgtacagagtgtcatatg
gaatgccaaagtaccagttatacatcatacaattcttacggagatggattcaacagagga
tcgttagagtggttgaaaaaaattagtaataaaacagaatcgcatatcaagagcaatgtg
gcagtcatcaatatattctttttggagatgttctacacttcttactctcaagttcaagca
acatctcttaccgagattctatcagatattggtggtaacatgggaatgttcctgggaatg
tcagttatcacaatcactgaactaactttgttcttctcaaagattttctggattatggtt
tcgaagagaagaaggcaatacatgtactcaaagaaaaagaacgagaaggaaaaagaacaa
caactggatgatgcagtcaaagagtttcaagaacgaagatctagaagaaattctagagag
aatatatcggcactcagcaactacagtaaccgaataatgccgattgaagaattccaaaag
aagtttgcttacaaaaacgggaattcagaagaaaacctttcgtcggctagtttggacagt
gttattgagctgaaattcgacatcaatgagttacgtcgccagttaaaccagcaatcttcg
gatggcatcgccagaatccggttaccaaatcagacaacacgtcccaactcgacaaatcta
gaaaattattcatcaactcccccgattttcacaatagaaccgagctccagaagatcctct
caaacgccatctcctccttcgaaacctccgaattctcagtcaccgaaataa

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