Caenorhabditis briggsae (nematode): CBG_12097
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Entry
CBG_12097 CDS
T01054
Symbol
Cbr-hop-1
Name
(RefSeq) Protein CBR-HOP-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04310
Wnt signaling pathway
cbr04330
Notch signaling pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
CBG_12097 (Cbr-hop-1)
04330 Notch signaling pathway
CBG_12097 (Cbr-hop-1)
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_12097 (Cbr-hop-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_12097 (Cbr-hop-1)
Peptidases and inhibitors [BR:
cbr01002
]
Aspartic peptidases
Family A22: presenilin family
CBG_12097 (Cbr-hop-1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
8588376
NCBI-ProteinID:
XP_002646379
WormBase:
CBG12097
UniProt:
A0AAE9DV15
A8XEJ8
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Position
I:complement(7844887..7846199)
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AA seq
358 aa
AA seq
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MVRTRRVYSGATLLRVLYPVALCMIFVAINVSICRPPITKTPKVIYGVFHSYDTEESGHV
TLLLMIFLVLTTTMGVVCYKKRLYKAITAYIIANSISLLLVYAFFHFHNLAQACSIPMSV
PSSVFLTFQFGGLGVLSLHWKAHRRLHQFYLVMLAALTALFLLKNLPDWTVWISIVAISI
WDIVAVLTPCGPLKMLVETASRRGDNNFPAILYNSSSYVETPETPDTTRPHSTQLTEFSN
SSNANLLQSDSLLTTPVIPRRTREVREVEGTIRLGMGDFVFYSLMLGNAAQTSPLTTVLA
CFLSNLVGLTITLPVVSLSQTALPALPFPLLIAALFYFSSHVALTPFTNLCSLTLILF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggttcggacgcgaagggtatattcaggagcaacattacttcgggtgctttatcctgtt
gctttgtgtatgatttttgttgcgatcaatgtttctatatgtcgtccacctattacgaaa
acacccaaagtaatttatggcgtatttcattcgtacgacacagaagagagtggacatgtt
acactattgctcatgatttttctggttctgacgacaactatgggcgtcgtttgctataaa
aaacgattgtataaggcaataacagcatacatcattgcaaacagtatctcccttctactt
gtctatgccttctttcactttcacaacttggcacaagcttgttcgattcccatgtctgta
ccttcttcagtctttctgactttccaattcggcggtttaggagttctcagtcttcattgg
aaagctcatagaaggctacaccagttctacctagtgatgcttgcagctttaacagcctta
tttctactcaaaaatctaccagattggactgtttggatatccattgttgccatttccata
tgggacattgtcgcggttttaactccatgtggcccattaaaaatgcttgttgagactgca
agtcgtagaggggataacaattttccagccattttgtataactccagctcttatgtggaa
acgccggaaacgccggatacaacacgcccacacagcacccaactaacagagttttctaac
tcatcaaacgcaaacttactgcaatcggattcattattaacaactccagtaataccccgg
cgaacgagggaagtgcgagaggtggaagggaccattcgtctcggcatgggtgatttcgtt
ttctactccctgatgctggggaacgccgctcagacgtcccctcttactactgtattggct
tgcttcttgtctaatctcgtcggattgacgattactctcccggttgtgagtctgtctcaa
acggccctacccgctctaccatttcctttgttgatagcagctttgttttatttctcttca
catgtcgcactgactccattcactaatttgtgctcattgacattaatcttgttttga
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