Caenorhabditis briggsae (nematode): CBG_12282
Help
Entry
CBG_12282 CDS
T01054
Symbol
Cbr-ran-2
Name
(RefSeq) Protein CBR-RAN-2
KO
K14319
Ran GTPase-activating protein 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CBG_12282 (Cbr-ran-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_12282 (Cbr-ran-2)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CBG_12282 (Cbr-ran-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
8584689
NCBI-ProteinID:
XP_045094816
WormBase:
CBG12282
LinkDB
All DBs
Position
III:complement(12598217..12610524)
Genome browser
AA seq
975 aa
AA seq
DB search
MLPRLFLTILPVYSGISPTSENSKNSEYRLLFEMATTSSSNPQHQRHNNTLSFFGQQLKM
DTEEQIAIVVNQIRAHPNLEILDFRGNTISVLAGRRIADALRTRRELKECIWSDMFTGRL
KDEIPLVLDALEEALTASGCQLTTLDLSDNAFGAGLSDSLSNFLQSPALYSLENLILNNN
GLGLAGEVVGNALCSLISASQKAGRPLKLKKFVCGRNRLEVVSTIALSDAFILMQTLEEI
RLPQNGIREPAFGALAVALQANKNLRIIDLNDNICGTQGALELAEILPDLHHLEILDLGD
CVCDDDGVVGILSGLDRKRDCLKKVVLSGNNITADIIEEIGDFFNSAGMAHVKVDISVNM
FGEDFDAAKARYGKGNIDFGRRGDDELLSSDGEEMEADDASMEEDAMNTSRDTIIERSAE
ESDKAQQMLNELVTKGFGCIRIGDPVETASTDRVSFLDKGLKLDTAQSAEKVVKIITATR
SMKTLELRGNTLGIDAGVLIARALESHPELEKCLWSDLFTGRLKNEIPPVLEALGKGIIA
AGAKIRELDLSDNAFGPIGADAIKELLESPSAYTLETLKLNNNGLGIGGKQIAKSLAECL
RKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGIRAL
VSALKHNRNLRHLWLEDNTVLPKGAKALARALESWPKLEVLNLSDCLIRDAGCNYIIDHL
NPQLHRHLKNVYLCGNELTPPVAKLLIQKWSKFDGFNPKPFLHIHTNSFGAEFDDVARMA
PDNVNVGDEEDDLGSLDGEEEEYNSKSSDSDDADLEDAADDDDDDEEDDEEIQIVHPSEE
TQLKQSIDRIDQLDIDFESRFQEDTARVLLQLSAPLKACGMSSKAMERALEVAENIVRRV
EAVKRNPIPATAQLVNNIVAQCAGTGVKLQAETDWGYNADSQVMGRLLTELVARGHFNWS
DNSFSDSFHLPVSES
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagactattcctgacgattctacctgtgtattctggaatttcgccgacttct
gaaaattctaaaaattcagaatataggttactattcgaaatggccaccacatcgtcttct
aatccacaacaccaacgacacaacaatacgttgtcgtttttcggacaacaactcaaaatg
gataccgaggagcagatcgccatcgtcgtcaaccaaatccgcgcgcatccgaatctggag
attctcgacttccgtggaaacacgatcagcgtgctggctggaagacgaatcgccgacgct
ctgaggacgagaagagagctgaaagagtgcatttggagtgatatgttcacgggaagactc
aaagacgagatcccattggttttggatgcgctcgaggaggctctcaccgcttctggatgt
cagctgaccacgctggacctttcggataacgcatttggagctgggctgtcggattcgttg
tccaatttcttgcagtccccagctctctactccctggaaaatctgattctcaacaacaat
ggtcttggattggctggtgaagtcgttggcaatgctctgtgctctctgatctcagcatcc
cagaaggccggccgaccgctgaaactcaaaaagttcgtgtgcggtcgaaatcggctggaa
gtggtctccacgattgctctctctgacgccttcatcctaatgcagacacttgaagagata
cgtcttccccagaatggaattcgcgagccagcgtttggtgcattggctgtcgcgttgcag
gcgaacaagaatctgcgcatcatcgatctcaacgacaacatttgcggcacccaaggagct
ctggaactcgctgaaatcctcccggacctccatcatttggagattctcgatctgggagac
tgcgtttgtgatgacgacggcgtcgttggaattctaagtggtctggatcgaaagagggac
tgtttgaagaaggtggtgttgagtggaaacaatatcacagccgatatcattgaggagatt
ggcgatttcttcaattccgctggaatggcgcatgtcaaagtggacatctcggtgaacatg
ttcggtgaggatttcgacgctgccaaagctcgctacggcaagggaaacattgatttcgga
agacgtggcgacgatgaacttctgtcttcagatggcgaggaaatggaggcggacgatgcg
agtatggaggaggacgcaatgaatacatcgagggatacgatcattgaacgatcagctgag
gaatcagacaaggctcaacagatgctaaatgagctggtcaccaagggattcggatgcatt
cgaattggggatccagtggagacggctagcactgatagagtgtccttcttggataagggt
ctgaagttggataccgctcagagtgccgagaaggtcgttaagatcatcaccgccacgaga
tcaatgaaaaccctggagctgcgcggcaacacattgggcatcgacgccggagtgctcatc
gccagagctctcgaatcgcatccagaactcgagaagtgcctgtggagtgatctgttcacg
ggacggctcaaaaacgagattccaccggttctagaggctcttggaaagggaatcatcgcc
gctggagccaagattcgagagctcgatctgtcggataacgctttcggaccgattggagcc
gatgcgattaaggaattgctcgagtcgccctccgcgtacactctggaaacgctgaaactc
aacaacaacggattgggaattggcggaaaacaaatcgccaaatcgcttgccgagtgtctt
cgcaagtctatcgccgtcggtggcgagaatcgtcttcgtctgaagacgttcatcgccgga
cgaaatcgactggagaatcccggagctcatgcgttggctgctacattcaagtcgctggaa
acggtcgagtggttcgacgttcgtcaaaacggaatccacgaagaaggcattcgagcactc
gtctccgcactcaaacacaacagaaacctgcgtcatttgtggttggaggacaataccgta
ctcccgaaaggagccaaagcactcgcacgagctctcgaatcatggccgaagctggaagtg
ctgaatctgtcggattgtttgattcgcgacgccggatgtaactatatcatcgatcatctg
aatccacaacttcatcgtcatctcaagaatgtgtatttgtgtggaaatgagctcacgcca
cccgttgcgaagctcttgattcagaaatggtccaaattcgacggcttcaacccgaaaccc
ttcctccatatccacacaaactcgttcggcgccgagttcgacgacgtggcacgtatggca
ccagacaatgtgaatgtgggtgatgaggaagatgatttgggatcgttggatggcgaagag
gaggagtacaactcgaaatcctcggattcagatgacgccgatttggaagatgccgctgat
gacgacgacgacgatgaggaggacgatgaggagattcagatcgtccacccatccgaagag
acccagttgaagcaatcgatcgatcgcatcgatcagctggatatcgatttcgagagtcgc
ttccaagaggacaccgcccgtgtgcttcttcaactatcggcaccgctcaaggcgtgcgga
atgagttccaaggcgatggagagagccctcgaagtggctgaaaacattgtgcgtcgcgtc
gaggctgtgaagcgcaatccgattccagcgaccgctcaactcgtcaacaatatcgttgct
cagtgcgctggcactggtgtcaagttgcaggccgagaccgactggggctacaacgccgac
tcgcaagtgatgggtcgtctgctcacggagctcgtcgcacgcggacacttcaattggagc
gacaactcattcagcgattctttccatctgccagtcagtgaatcgtga
DBGET
integrated database retrieval system