Caenorhabditis briggsae (nematode): CBG_12391 Help Entry CBG_12391         CDS       T01054                                  Name (RefSeq) Protein CBG12391   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism cbr  Caenorhabditis briggsae (nematode) Brite KEGG Orthology (KO) [BR:cbr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cbr04131]     CBG_12391 Membrane trafficking [BR:cbr04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     CBG_12391 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VPS13_N VPS13_M VPS13_VAB VPS13_C Motif Other DBs NCBI-GeneID:  8581666 NCBI-ProteinID:  XP_045094852 WormBase:  CBG12391 UniProt:  A8XFB6 LinkDB All DBs Position I:8796036..8806953 Genome browser AA seq 3252 aa AA seqDB search MVFESLVADLLNRFLGDFVDNLDSSQLNIGIWGGDVKLDNLQVKETALDDFDLPIKLKYG YLSSLVLKIPWKNLYNEPVIATVDGLNLIVVPNKGVVYNEKKAAKNIQEIKQKTLARLEE ARKERRKPKDPQADTFTEKMITQIIKNLQVSRDEFLRFLQVFFFRSQFQTFMFALKTDTP IVITTDENWKETIHKDVVKIIYKLVSLQNLAVYWNSSTEFISDLDDKNIIQQKLQETIHN GKNQPEGFKYILEPIQMEAKLKLNQKPETDGSHWTIPKIDLAVDMHSLALAIGKFQYQDI LLFLEAQERFNAAGQYLKYRPNINEFKGHYKQWWKFAYTAILEEKVRRRRNNWSWDRMHK HRQLVKKYQKAWVRRQTEASPGAEVETTVKEAEKKLDVFNVNVARQQAELEIDRLGLTRQ EDKPQGWVAWGKSLFGSGGGGPIPDKNKKGGKDIGSQFQEAMTPEEKAKLFEAIDYQENI PPTNYPKEFVENKFEFKLGQVAIVVDGAVSMQLLKLQANVEQRPSAGAMHVESSIQELRM DGCGSEVIRVRDPTIPWMSFLLDTNPLKGDYDQLVKLAIAPINVKYQAPAINNAIDVFKP PESVRLNQLTALAMSRYEEVKTRSVTGLAHAVEHRSRLVLDVQIQPARIYVSEGGVYCED KPSLLADMGLLSVVTVDTSTVNTSGMNKLSALMEKAYDRFHVKLSNVVIAFAENVSTAEA CVFEKESPLHVLKPTGLDIQIHKSSIDDLRLAKMRVLGDLPDIVIGISDVRLIGLMKLAL SIPTPKPDEKTMAEKELEVVPEAKIRDRAKMRTIMEAEEMEEDVTQKNDGEDEDDQQKKK KTSEQQVQIELDLRLNQIGVIVYRKDTVFCDVSIMKMSCKLQMRTFDMVVTAELGSIRIS MPEFSSLDPRRQHLFLIDNDENQGSLMTLKFVQANPESPFFATEYALTEQSVDFTFTKLV VSLHQEGVLELKGFGEALQSQLAELQKDKPEEEKLEETARKISRKLSDSVMSIASLSATS STREKRQRKKTVSSLAAAELDASRNIKQHIKASFGSLALNIGTQKALETSLAIEHVSFGS RLFLFNINANVKITEKAMEVVATLRAISMKDRTTGAVYKKLLSVTGNEDMLRFDFIQYQR TDEDRALMKSSDVDMVVKMRLAQMRFVFLNLWLARLMAWIAPFQNEAVRAAQAAQAAAAE RAAAAAQNVKQIMEQSPPRIQLDVILEAPFIVVPRLSTSRDVIVLHLGRLALKNEIRGDS HHPKAVIDRMDIQMTDCSFGMGVMNDDVSAVSSSCMILKPISFKLALQRNLTFATVKQIP KIVVDAHLNSIEAELSDVDYKTLMQTLSGNLAEGADLAVPPPPPPPSLESSNTAVAPATP GKEKEKKDREANAGPPLIEKSHTRIVFQFVLDKISAVLYEGEAVNGVRNESDAFAALRLN NVKTSGKIGEDNSIVFAMSLDAFTMDDERKEKTKISKLMDKKGAKEDRFLGMSFNQDAEA NKQIRLKMSAFFICLCPEFLGCLTRFFNVPQSEEQLEKEAVTSNVPTKAVSSSTATSSGG VKPPAGPSQPVGTLAIDCDMHGVEVILVEDSMHPESTQALILSFNVTAASHPNETTKDTK MNVAVENLTIFSSFYNPKRRNEVTYQVLTPVRIEALVNMNTETKTTDAVLKMSAMDVKMS PSIIRLLSAVSAEFAKSSGTVETGSVSQKLAKLRKWPNYFESKPIDHRKYWFFAAPVAQE AVEAEEDATQEEKSRTDSMIGKENAKVDIERISFTLEAGTGAIPVPLIFLDMLINAEAQD WSSAMRVTSGISLQMSYYNESVSVWEPIIEPVENEKGEYERWKLAMNIRNYSTVTGFQMK SRNKQDSSDTSPQTEVKIEADKMLNVTVTKSLLTLLNKLSEVFATAAKQITPTQTRHLPG ISPFVVLNETGIAVKVLDTETIRVSENGEVVDATHGDFVDVFLKNKKSNVEDRRLSIEQE EVTGDLKFELTGTVRETKIGRAEKRIIHLPKVSEGGHKWLIVAETTIENNRRLVTLNSHV KFTNHLSYPVELYSKRDTTLDLFGTVEHGETIPLAVPLLFSPSGDIYLKPVDDKYEVSFE SLCWHNFEHNRRQAVRCEADSTDGSFSGIYIDSVVHEEKIPDGVDDQTTSIYHVHLHPPL EFHNNLPFDITLELPEQKVLSAGTSSLLNVVAGSPVKAWLMYLGEKYVLEMPVPEIKKDV EVVALNTETGSDELVRHFENESLEQPNFLQLLGLHWTSEYGDQKVYLYAPFWLVNNTDKM LRHVESSGNMLTNTARGCVPCGKKSVITSQENDDAVQHAPNENPIILPFPAVDLSKKKKA RVRIERESEWSDEFPLDTVGNAARITCKGAHNDFDLTVDIKLCQSGLTKIVTFAPFYLVS NLGKNSMEIREEGQKNWIEIPAETCVGVWPEERKKRKLMCVRYKEEPEAESLLFPITENY ETLCHMDGDSIGVEVSVSTGESSVAIHLSPFTPGMCPVQVMNNLSVPVSFGQKGHKKTSV GPNESLHFSWASITDAKILEVDVGDWHFEDKLDQNRFGDLQIDKNVRRFSYYSNFLIGRQ RVLLFTPDVDIAKAAYGSWETDIVDMQAEISLQGFGLSVVDNIVGREIIYMAISSSDILW EEEIKKGRFKPLAVKYMQALEEKYQAHLLTPNDEYESIEGFEVNVNRLILKKKKGKEVKI RRIFEQGLWASYGKSAQRTRLHAKINHIQVDNQLDACIFPRVLSVVPPPKSVVVDNTPKP FIELSLLQRQPEFSSIAEIEYAHVLIQEFSVQVDQGLINALLLLAAGEVARKPYGKEMFD EDLKICHVTLSETASTYRSQRPKSFYNDLHISPIMMHLSFSQGGTSGDAAASGASMPIQS EMINVLLRSVGVTLTELQDVVFKLAYFERKCVFYSPEQLNGEIISHYAKQFIKQVYVLVL GLDIIGNPFGLVRDLSAGVEDLFYQPFQGAIQGPEEFAAGVALGVQSMFGHAVGGAAGAV GRITGTVGKGVAALTFDDDYMKKRQEDLNRKPQSFGEGMARGLKGLGMGVVGGITGVVTK PIEGAKQEGGFGFVKGVGKGLIGVVTRPVSGVVDFASGTMNSVRAVAGTNREAGPLRPPR VLRADRIVRPYSSTDSYGFKVFKDTDRGEIAETDEFVTYASISDKIVLIITDRRLVLSKR TDMMGVWQTDWSTEYCKIKEPEFIPNGVKILLKEKKKGFLGIGSSEGKIITFQNAEKIHP KLAAAYKKATLA NT seq 9759 nt NT seq  +upstreamnt  +downstreamnt atggtttttgaatcgctggtcgccgacctgctcaacaggttccttggcgactttgtcgat aatttggactcttcacaacttaatatcggaatttggggaggagatgtgaaactcgacaat ttgcaagtcaaggaaacggctctagatgattttgatttgccaataaagctcaagtacggc tatctctcctctctggttctcaaaattccatggaagaatctttacaatgagccagtcatt gctacagtggatggcctcaacttgattgttgtgcctaacaaaggagttgtttacaatgag aagaaagcggccaagaatattcaagagatcaagcagaagacattggctcggctggaggag gctcgcaaagaacgtcggaagccaaaggatcctcaagcagatactttcactgaaaagatg atcacacagattatcaaaaacttacaggtaagtagagacgagtttttaaggtttttacaa gtgttttttttcagatctcagtttcaaacattcatgttcgctttgaagacagatacacca atcgtcatcaccaccgatgaaaattggaaggaaactattcataaggatgttgtcaagata atctacaagctcgtctcactccagaatcttgcagtatactggaactcttcaaccgagttc atctctgacctagatgacaagaatattatccaacagaagttgcaagaaacgattcacaat ggaaagaatcagccagaaggattcaaatatatcttagaaccgattcagatggaggcaaaa ctgaagttaaatcagaagccagaaactgatgggtcgcactggacgattcctaaaattgat ctggctgtagatatgcattcgctagcacttgcgatcggaaaattccagtatcaggacatt cttctcttccttgaagcccaagaacgattcaatgcagctggacagtatctaaaatatcgt cctaacattaacgagttcaaggggcattataagcaatggtggaaattcgcctataccgcg attcttgaagaaaaagtgaggcgtcgccgtaataattggtcttgggatagaatgcacaaa catcgtcaactcgtgaagaagtatcagaaggcatgggttcgtcgtcagactgaagcaagc ccaggagctgaagtggaaaccaccgtaaaggaggctgaaaagaagctggatgtgttcaat gtgaatgtggcacgtcaacaagccgaattggaaatcgacagacttggattgactcgccaa gaggacaaaccacaaggatgggttgcttggggaaaaagcttgtttggcagcggcggcggt gggccaattccagataagaacaagaagggaggaaaagacattggttcgcaattccaagaa gcgatgacacctgaagagaaagcgaagctgttcgaagctatcgattatcaggagaacatt ccaccaaccaactacccgaaggagttcgttgagaacaaatttgagttcaagcttggacaa gttgccatagtggttgatggagcagtttcaatgcagcttctcaagttacaagctaatgtc gaacagcgtccaagtgctggagcaatgcatgtggaatcatcgattcaagaacttcgaatg gacggatgtggttctgaagttattcgcgtacgtgatcctacaattccatggatgtccttc ctccttgacaccaatccactgaaaggagattatgatcagctcgtgaaactagctatcgct cccatcaatgtcaaatatcaggcacctgcaattaacaatgctatcgatgtgttcaagccc ccagaatcagttcgtctcaaccaacttacggccctggcaatgtctcgttacgaagaagtc aaaacaagatctgttaccggacttgctcacgcggttgagcatcgttctcgtctggtgctc gatgttcaaattcaacccgctcgaatttatgtcagtgaaggcggtgtctactgcgaggat aaaccaagtttgctcgcagatatgggtctgttgtctgttgttacagtcgatacgtcaact gtaaacacttctggaatgaataaactgtctgctctcatggagaaggcatatgatcgattc cacgtcaagttgagtaacgttgtcatcgcttttgctgaaaatgtttccactgctgaagca tgtgtcttcgaaaaagaatcgccacttcatgttctcaaaccaactggattggatattcag attcacaaaagttctatcgatgatttgagacttgcgaagatgagagtgctcggcgattta ccagatatcgttatcggaatttcagatgtccgacttattggattaatgaagctcgctctc tccattcctactccgaagccggatgagaaaacaatggccgaaaaagaattggaagtggtt cctgaagctaaaattagagatcgtgctaagatgcgaactataatggaagctgaagaaatg gaagaagacgtgacacagaaaaacgatggtgaggacgaggatgatcagcaaaagaaaaag aagaccagtgagcaacaagttcaaattgagcttgatctccgattgaatcagatcggagta atcgtttaccgtaaggacactgtcttctgtgatgtttccatcatgaaaatgtcttgtaaa ctccaaatgcgcacgttcgatatggttgtaacagctgaacttggatctatcagaatctcg atgcccgaattcagctcattggatccgagacgtcaacatctgttccttattgacaacgat gaaaatcagggatcactgatgacgctgaaattcgttcaggcgaatcctgaatcaccattc ttcgccacggaatatgcacttacagagcaatctgtagatttcacattcacgaaactcgtc gtctctcttcaccaagaaggagttttggagttgaaaggattcggggaagcattacaatca caacttgctgagcttcaaaaggacaagccagaagaagaaaagttggaggaaacggctcgc aagatcagcagaaagctcagtgacagtgtcatgtcgattgcatcactgagtgctacctcc tctacaagagaaaagcgacaacgaaagaagactgtcagttctctcgctgctgcggagtta gatgcatccagaaatatcaagcaacatatcaaggcttcatttggaagtttggctttgaac attggaacgcagaaggcattggaaactagtttggctatcgaacatgtgagtttcggtagt cgtttgtttctattcaatatcaacgctaacgtaaaaatcaccgagaaagctatggaggta gttgcaactcttcgtgcgatatccatgaaagatcgtaccacaggagcagtttacaagaag ctgctctccgtgactggcaatgaagacatgcttcgttttgatttcattcagtatcaaaga actgatgaagatcgtgctttgatgaagtcatctgatgttgatatggtcgtaaaaatgcgc ctcgcacaaatgagattcgtcttcctgaatctttggttggcacgtctcatggcttggatt gctccattccaaaatgaagccgttagagcagcccaagctgctcaagcagctgcagccgaa cgagctgctgcagctgcgcagaacgtcaagcaaatcatggaacagtctcctcctcgtatt cagctcgatgtcatccttgaagctccatttattgttgttccaagactttccacttcgcgt gatgtcatcgtccttcatctcggtcggcttgcgttgaagaatgaaattcgaggcgactca catcatccgaaagcagtgatcgaccgaatggatattcaaatgactgattgctcatttgga atgggtgttatgaatgatgatgtgtctgctgtctcgtcttcgtgcatgattctgaaacct atttcgttcaaactcgctcttcagaggaatctaacgtttgccaccgtgaagcagatcccg aaaattgttgttgacgctcatctcaactcaattgaagcagaattgtcggacgtagactat aagacactcatgcaaacattgtctggaaacctggccgaaggcgctgaccttgctgttcct cctccaccacctccaccatcgctcgagagttcgaatactgctgttgcaccagctactcca ggaaaggaaaaagagaaaaaggatcgtgaagctaacgccggaccgcctcttattgaaaaa tcacacactcgaattgtattccagttcgtcctggacaaaatctctgcagttttgtatgaa ggagaagctgtcaacggtgtgagaaatgagtctgatgcatttgcagctctgcgtttgaac aatgtgaaaacatcaggaaagattggagaagacaattcgattgtattcgcgatgtcgctc gatgctttcacaatggatgacgagagaaaggagaaaacaaagatttcgaagctgatggac aaaaagggagcaaaagaagatcgcttcttgggtatgagtttcaatcaagatgcagaagct aacaagcaaatccgactcaaaatgagtgcgttcttcatctgcctgtgtccagaatttttg ggatgcctcaccagattcttcaatgtgccgcaatctgaagaacaattggaaaaggaggct gtgacttcgaatgtgccgacgaaagcagtatcaagttccacagccacatcttctggtgga gtaaaaccgcctgcaggtccatcacagccagttggaacactcgccatcgattgtgatatg cacggagttgaagttatccttgttgaagattcaatgcatccagaatccacgcaggctctc attctatccttcaatgttactgcagcttcccatccaaacgaaacaaccaaagacaccaaa atgaacgttgcagttgaaaatctgacaatcttttccagtttctacaacccgaaacgtcgt aatgaagtgacataccaagttctcactccagttcgcatcgaggctcttgttaatatgaat acggagacaaagacaactgatgcagtcctcaaaatgtctgcaatggatgtcaagatgtct ccttcaattattcgcctgctatctgccgtttcagccgaattcgctaaaagcagcggaact gtcgaaacaggatcggttagccagaagttggctaagctgcggaagtggcctaactatttc gagtcgaaaccgattgaccacagaaagtattggttcttcgcagctccagtggctcaagaa gctgttgaagcggaagaggatgctacacaagaagaaaagagcagaaccgactctatgatc ggaaaagaaaatgcgaaggtcgatattgagagaatctcgttcacattggaagctggaaca ggagctattcccgtgcctttgatcttcctcgacatgctcatcaatgctgaagcacaagat tggtcatcggctatgcgtgtaacttcaggaatttctctgcaaatgtcgtattataacgaa tccgtcagtgtttgggaaccgattattgagccagttgaaaatgagaagggagagtatgaa cggtggaaattggctatgaacattaggaattattctacagtaaccggttttcagatgaaa tctcgcaacaagcaagactcctctgacacatctccccaaaccgaggtgaaaatcgaggca gacaagatgttgaatgtcacagtcacaaaatcacttctcactttgctcaacaaactttcc gaagtgtttgcaacagcggctaaacaaatcactccaactcaaacgcgccatctcccagga atatctccatttgtcgttctcaatgaaacgggaatcgctgtcaaggttctcgataccgaa acaattcgagtcagtgaaaatggtgaagttgttgatgccactcatggagacttcgtcgac gttttcctcaagaacaaaaagagcaatgtggaggatcgtcgattgagcattgagcaagaa gaagttactggagatctcaagtttgaattgactggaactgttcgtgagacaaagatcggt cgtgcagaaaaacgaattattcacctaccaaaagtcagcgaagggggacacaaatggctg atagtcgcagaaacaacaatcgaaaacaaccgacgccttgtgacacttaactctcatgtc aaattcactaaccatctatcctatccagtggaactatactcgaaacgagatactactttg gatctgttcggtactgttgaacatggagaaaccattcctctggctgttcccttgctcttt tccccgtctggagatatctatctgaaaccagtagatgataagtacgaagtgtcattcgaa tccctctgctggcacaacttcgagcataaccgccgccaagctgtgcggtgcgaggcggac tcaaccgatggatcattctccggaatttacatcgattctgttgttcacgaagaaaaaatt ccggatggcgttgatgatcagactaccagcatttatcacgttcatcttcaccctccactt gagtttcataacaatcttccattcgatattacactcgaacttcccgagcaaaaggttttg tctgctggaacatcttcacttctgaatgtggttgccggaagcccagtgaaagcgtggctg atgtacttgggtgagaagtatgttttggaaatgccagttccagaaatcaagaaggatgta gaagttgtggcgctgaacacggaaactgggtcagatgagcttgtaagacattttgaaaac gaatcattggaacaaccaaattttttacagcttcttggacttcattggactagcgagtac ggagatcagaaagtgtatttatacgctcctttctggcttgtgaacaacacagataagatg cttcgtcatgtggagagcagcggaaacatgttgacgaacactgcgcgtgggtgtgttcct tgcggaaagaagtcggtcatcacatcacaagagaacgatgatgctgttcagcatgcgccg aatgagaatccaatcattcttccattcccagctgtggacttgtccaaaaagaagaaggct cgcgtcagaattgaacgcgagagtgaatggtctgatgaattcccactggacacagttgga aatgcagcccgtatcacttgcaaaggagctcataatgattttgatctaaccgttgacatc aaactttgtcaatcaggactcacaaaaattgtcacattcgcaccattttacttggtttcg aatcttggtaaaaattcgatggagattcgagaagagggtcaaaagaattggattgagatt cctgcggaaacgtgcgttggcgtttggcccgaggaacggaagaagcgtaagctcatgtgt gttcgctacaaagaagagccagaagctgaatccctgttgttcccaatcacagagaactac gaaaccttgtgccacatggatggtgattctattggtgttgaagtttctgtctccactgga gaatcttccgtggcaattcatctttctccatttactcctggaatgtgtccagtccaagtg atgaacaacctgagtgttcctgtctccttcggacaaaaaggtcacaaaaagacatccgtt ggtccgaatgagtcgcttcacttctcatgggcgagcattacggatgcaaagatcttggaa gtcgatgttggtgattggcacttcgaagacaagttggatcaaaatagattcggagatttg caaatcgacaagaacgtcagaagattctcatactattctaacttcttgattggacgacaa cgcgttcttctcttcacgccagatgtggacatcgcaaaggcagcatatggaagttgggaa actgatattgttgatatgcaggcagagatctctcttcaaggattcggactctccgttgtt gacaacattgttggaagagaaataatctacatggctatttcatcatcggacattctatgg gaagaggaaatcaaaaaaggacgattcaagccactcgctgttaagtacatgcaagctctg gaagagaagtatcaagcacatcttttgacaccaaatgatgaatacgagtcaatcgaaggt tttgaagtcaatgtgaatcgtttgattttgaaaaagaagaagggaaaggaagtgaagatt cgcagaattttcgaacaaggtctgtgggccagttacggaaagagcgctcagcgaacgaga cttcatgccaaaatcaatcacattcaagtagacaatcagcttgatgcctgcatcttccca cgcgttctttcagttgttccacctccaaagagtgtggttgttgacaacactccgaaacca tttatcgaactttctctccttcaacgtcaacctgagttctcttctatcgctgaaatcgag tacgcccacgtactgatccaagaattctctgttcaagtggatcaaggtctcataaatgct ctactcttactcgctgctggagaagtagccaggaaaccttatggaaaagaaatgtttgat gaagacctcaaaatctgtcacgttactctctcggaaactgctagcacatatcgctcacaa cgtccaaagagtttctacaacgatcttcacatttctccgatcatgatgcatttatcattc tcccagggaggtacttcgggagatgccgctgcgtcaggagcttcgatgccaatccagtct gaaatgatcaatgtcctcctaagatccgtcggagtcactctcactgagttgcaggatgta gttttcaagcttgcatatttcgaacggaaatgcgtattctatagtccagaacaattaaat ggagagatcatttcccactacgcaaaacagttcatcaaacaggtttatgttctcgttttg ggacttgatatcatcggaaatcctttcggattagtaagagatttgtcagcaggagtcgaa gatcttttctatcaaccattccaaggagcaattcagggaccagaggagtttgctgctggt gttgctctcggagttcaatcgatgttcggacacgcggttggtggagcagctggagctgtc ggacgtatcactggaacagttggtaaaggagtcgcagcactgacattcgacgatgactac atgaagaaacgtcaggaagatttgaaccgtaaaccacaatcgtttggagagggaatggct cgtggactaaaaggactcggaatgggtgttgtgggaggaataacaggagtggtgacaaaa cccatcgaaggagctaaacaagaaggaggattcggttttgtgaaaggagttggaaaaggt ctcatcggggttgttactcgcccagtttctggagtcgtggattttgccagtggcacgatg aactctgttcgcgctgtggctggaactaatagagaagccggacccctccgaccaccacgt gttcttcgcgctgatagaattgtcagaccatactccagcacggattcctacggattcaaa gttttcaaagacaccgaccgcggagagattgccgaaaccgatgagttcgtgacgtacgct tctataagtgacaagattgtgctcatcatcaccgatcgtcggttggttttgagcaagcgg actgatatgatgggagtctggcaaaccgactggtcaacggaatactgcaagatcaaggag ccagaattcattccgaatggtgtcaagattttgctgaaggaaaagaagaagggcttccta ggaatcgggtcatcagaaggaaagataatcacattccaaaacgctgaaaagattcatcca aagttagctgctgcatacaaaaaagctactctcgcgtag

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