Caenorhabditis briggsae (nematode): CBG_12435
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Entry
CBG_12435 CDS
T01054
Symbol
Cbr-rad-54
Name
(RefSeq) Protein CBR-RAD-54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBG_12435 (Cbr-rad-54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_12435 (Cbr-rad-54)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CBG_12435 (Cbr-rad-54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
PWWP
HDA2-3
Motif
Other DBs
NCBI-GeneID:
8581706
NCBI-ProteinID:
XP_045094868
WormBase:
CBG12435
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Position
I:complement(8625006..8629005)
Genome browser
AA seq
1079 aa
AA seq
DB search
MPSKTFNPGDFVWAKFPGFPPWPAEVRNAYIFLHSLKSVKVLQCELKRGKPNYTVRYFGS
KEEGVVKFDEVDDYYEKRKRFGKSKRVKGFDQAVEEIEAIIEEKVLKMTQEGVDEVSPVQ
TTLAPAKTDLPPTSTSSGSDDQIIVEAPEPYAITTVKDEKEVVEESTSLCSGSSHLHPHS
IEDDNQHTEVSKIPRFESPIAIERARIRLDDTDDEDFLNLLDENDETVLTESSGITEVKT
EKTTLKKTEVVELIVDEEERTIPIKNSSKEIVVIENTKEAGSSDDFVSSTKRKREESPKN
LYTNNKFGFSSSTKTKKFGIFSKSNRTQELLIHKSFVSPFSTSVSPTKQGLRRKKKAPPA
IEPPVSVEKRIRFDLLTSTYLMKEWLLNLVIIMPWLQSCYLGNFRSQWKDTCVRFLGLGG
NRRKCALFDPYHEGALILYAPEQLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKF
MWDCVTGVNIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLV
KNWDKEIKKWLGTRLNAMPVDSGKRELIIQCLNSFMSDSKMRCAIPVLIISYETFRLYAN
ILHSGEVGIVICDEVSSYFVFSIHNLFTGTSFEKQRKLNLPSFERTEILVNFVNPGLLGT
ASEFRKKFENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYE
HIICCKNSTLQETLYNKLIECEKQNRITEKDKGATASALSFITHLKKLCNHPYLVYEELQ
KPDNRFRTKCLSVFPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTID
QFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANR
LVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVD
AGEDVARHFSNEQLRELFKLESASASDTHSKLKCKRCIQGLESVDPPVNADCTSDLANWF
HSEKSARKVADNVLRAVFECGSISFVFHQKSHNVEAKKVEEKIEELDEDYVPSEAEDDD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaaaactttcaatccgggagacttcgtttgggcaaaatttccaggatttcct
ccctggccagcagaggtacgtaatgcttatatatttcttcattcattgaaatcggttaag
gtacttcaatgtgaactaaaacgaggaaaaccgaactacacagtaaggtacttcggcagt
aaagaagaaggtgttgtcaaattcgatgaagtcgatgattattatgaaaaaagaaaaaga
tttggaaaatcgaaacgagtgaaaggattcgaccaagccgtagaagaaattgaagcaata
atagaggaaaaagttctgaaaatgactcaagagggtgttgatgaagttagtcctgtgcag
actacattagcaccggccaagacagatctcccacctacctctacgagctccggcagcgat
gaccaaataatcgttgaagcacctgaaccatacgcaatcactacagtaaaagatgaaaaa
gaggtcgttgaagaatcaacatctctatgctctgggtcgagtcatttacaccctcattcc
attgaagatgataaccaacatactgaagtttcaaagattccacgtttcgaaagccccatc
gcaatcgaaagagccaggatacgactagacgataccgatgacgaggactttttaaacttg
ctagatgaaaacgatgaaactgtattgacagaaagctccggaatcacagaagttaaaact
gaaaagacgactttgaaaaaaacagaagttgtcgaattgatcgttgacgaagaagaacgt
accataccaatcaagaattcctcaaaagaaatagtcgtaatcgaaaataccaaagaagct
ggttcatcggatgattttgtttcttctactaaacggaaacgggaagaaagtccgaaaaac
ttgtataccaacaacaagttcggcttcagctccagcacaaaaacgaagaagtttgggata
ttcagcaaaagcaacagaacccaagaactacttattcacaaatcatttgtttctcctttc
tcgacttctgtttctcccaccaaacaagggcttcgacgtaaaaagaaggcccctcctgcc
atcgaacccccggtttctgtagaaaagcgaatccgtttcgatttgttaacatcaacgtat
ttaatgaaagaatggcttctgaatcttgtgatcataatgccatggttgcaaagttgctat
ctaggaaattttcgatcccaatggaaggatacatgcgtaagatttcttggccttggaggg
aatcgtcgtaaatgcgcacttttcgatccttatcatgaaggtgcacttattctgtatgct
ccggagcaattaagtgagcatgctcagttgaaagaagacaaagacagaaaggttcatgtt
gtcgccgacccagttgttggaaaaattttgcgtcctcatcagcgagacggagtgaaattc
atgtgggactgtgtgactggtgtgaacattccagaatatcatggatgcatcatggctgat
gaaatgggtctcggaaagacgctacagtgtatttctcttctctggactcttctccgacaa
agtcccgacgcgtgtccaacggtatcaaaaagcatcattgtatgtcccagtagtttggta
aaaaattgggacaaagaaatcaaaaaatggttaggaacaagattgaacgcgatgccagtt
gatagtggaaaacgagaattaatcattcaatgtctcaattcgttcatgagtgactccaaa
atgcgatgcgcgattccagttcttattatttcgtatgaaacattccgtctgtatgccaat
attcttcattctggcgaagtaggaatcgttatttgcgacgaggtaagcagttattttgtc
ttttctatccataatttgtttacagggacatcgtttgaaaaacagcgaaaacttaaccta
ccaagctttgagcggactgaaattttagtcaattttgtcaaccctggattactcggtacg
gccagtgagttcaggaagaagttcgagaatgcaatcctaaaaggccgcgatgcagatgcg
agtgcagaagatcaaaagaaaggagaagaaaagacaaaggaaatggtttccttggtggaa
aagtgcattatcagaagaacatcagcactccttactaaatatcttccggtcaaatacgag
catatcatttgctgtaagaactctacccttcaggagacactttacaacaaactgatcgaa
tgtgaaaaacaaaatagaatcactgagaaggataaaggtgccacagcttcagcgctatcc
ttcatcacacacctcaaaaagctctgcaatcatccttatcttgtatacgaagagcttcag
aaaccagataatcgattcagaaccaagtgtctatctgtgttccctgaagcattcaatcca
aaatcattcgatccatccttctctggaaaaatgaaagtgttggattacattttggccgtc
actcgtaaaacgactgatgacaagttcgtattagtctctaattatacgcagacgattgac
caattcatggcgctatgtaaactccgcggctatgattttgtacgtctcgatggatcgatg
tctatcaaacagcgatcgaagattgtagacactttcaacgacccagcaagtactattttc
tgttttttgctctcttcaaaagcgggaggatgcggattgaatctgattggagccaatcgt
cttgttatgtttgatcccgattggaatccagcaaatgacgatcaggcaatggcaagagtc
tggagagatggacaaaagaagacttgcttcatctacagacttctcgcaactggatcaatc
gaagagaaaatgttccagagacaaacacacaagaaagcactgtcatcatgtgttgttgat
gccggagaggatgtggcccgtcatttcagtaatgagcaacttcgtgaactatttaagttg
gagtcagcatctgcgtcggacactcattcaaaattaaaatgtaagcgatgcatccaagga
ttagaaagtgttgatccacctgtgaatgctgattgtacaagcgatctcgccaactggttc
cattcggagaaaagtgctagaaaggttgctgacaacgttcttcgagctgtctttgaatgt
ggctctatttcattcgtctttcaccaaaaatcccataacgtcgaagccaaaaaagttgaa
gaaaagatcgaggagctcgacgaagactatgtgccatcagaagctgaggatgatgattag
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