Caenorhabditis briggsae (nematode): CBG_12484
Help
Entry
CBG_12484 CDS
T01054
Symbol
Cbr-rpa-4
Name
(RefSeq) Protein CBR-RPA-4
KO
K10739
replication factor A2
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03030
DNA replication
cbr03420
Nucleotide excision repair
cbr03430
Mismatch repair
cbr03440
Homologous recombination
cbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG_12484 (Cbr-rpa-4)
03420 Nucleotide excision repair
CBG_12484 (Cbr-rpa-4)
03430 Mismatch repair
CBG_12484 (Cbr-rpa-4)
03440 Homologous recombination
CBG_12484 (Cbr-rpa-4)
03460 Fanconi anemia pathway
CBG_12484 (Cbr-rpa-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_12484 (Cbr-rpa-4)
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_12484 (Cbr-rpa-4)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CBG_12484 (Cbr-rpa-4)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CBG_12484 (Cbr-rpa-4)
MMR (mismatch excision repair)
CBG_12484 (Cbr-rpa-4)
DSBR (double strand breaks repair)
HR (homologous recombination)
CBG_12484 (Cbr-rpa-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
WHD_MCM
Motif
Other DBs
NCBI-GeneID:
8582008
NCBI-ProteinID:
XP_045094883
WormBase:
CBG12484
LinkDB
All DBs
Position
I:complement(<9190826..>9192000)
Genome browser
AA seq
304 aa
AA seq
DB search
MNGKRQSLQDQFEANMDFSSGDGWASHDVSQGRKSAQTLGDKLPLPVTLSSLRNNLDDTD
EDSYQIGEFNFRTIHSVGVIMEKVSEDGKTTYTLHDPEKSEKTFYAIQFGQYDDGGSKFV
APGLIEDQRVRVMGKLKNVGGEKMILIYYLQQLGDDKDYQIFKLEAEVAELFFKKNLLEK
MRTGNTNGWTGMLAPPMTRYFDNFDANSFMHSEISKTPAAPIKIEQKLIQATPKTSSAFK
AKIRACIRSEAERGTYGNDDGVPFTKIMSRMNGVSEQALREILTEMENSGMIYAAKHEEY
MSLY
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaaacgacaaagtcttcaggatcaattcgaagcaaacatggatttcagcagc
ggtgacggatgggcctcgcacgatgtttcgcaagggagaaagagcgctcaaacacttgga
gataagcttccacttcctgtgactctctcttccctgagaaacaatttggatgatactgat
gaggattcatatcaaattggtgaatttaattttagaactattcattccgtcggtgtaatc
atggagaaggtttcggaagacggaaaaaccacttatactcttcacgatccagagaaatcc
gagaagacgttctatgctattcagtttgggcaatatgatgacggaggatcaaagtttgtg
gctcccggtttgatcgaggatcaaagggtacgagtgatgggaaagcttaaaaacgtcggt
ggcgagaaaatgattctcatatattacctccaacaattgggcgacgataaggactaccaa
attttcaagcttgaagctgaagttgctgagttattcttcaaaaagaatttgcttgaaaaa
atgcggactggaaacaccaatgggtggactgggatgctggctccaccaatgaccagatac
ttcgataatttcgatgcaaattctttcatgcactcggaaatttcaaaaactccagctgct
cctatcaaaatagaacaaaaactcatccaagcaactcctaaaacatcatctgcgttcaaa
gcgaagattcgagcttgcatcaggtcagaagctgaacgcggtacgtatggcaacgacgat
ggtgtcccattcaccaaaattatgagcagaatgaatggcgtgtcagaacaagctcttcgt
gaaatcctcactgaaatggagaacagtggaatgatctacgccgctaagcacgaagaatat
atgtctctgtattaa
DBGET
integrated database retrieval system