KEGG   Caenorhabditis briggsae (nematode): CBG_12484
Entry
CBG_12484         CDS       T01054                                 
Symbol
Cbr-rpa-4
Name
(RefSeq) Protein CBR-RPA-4
  KO
K10739  replication factor A2
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03030  DNA replication
cbr03420  Nucleotide excision repair
cbr03430  Mismatch repair
cbr03440  Homologous recombination
cbr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CBG_12484 (Cbr-rpa-4)
   03420 Nucleotide excision repair
    CBG_12484 (Cbr-rpa-4)
   03430 Mismatch repair
    CBG_12484 (Cbr-rpa-4)
   03440 Homologous recombination
    CBG_12484 (Cbr-rpa-4)
   03460 Fanconi anemia pathway
    CBG_12484 (Cbr-rpa-4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbr03032]
    CBG_12484 (Cbr-rpa-4)
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_12484 (Cbr-rpa-4)
DNA replication proteins [BR:cbr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    CBG_12484 (Cbr-rpa-4)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     CBG_12484 (Cbr-rpa-4)
   MMR (mismatch excision repair)
     CBG_12484 (Cbr-rpa-4)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     CBG_12484 (Cbr-rpa-4)
SSDB
Motif
Pfam: RPA_C WHD_MCM
Other DBs
NCBI-GeneID: 8582008
NCBI-ProteinID: XP_045094883
WormBase: CBG12484
LinkDB
Position
I:complement(<9190826..>9192000)
AA seq 304 aa
MNGKRQSLQDQFEANMDFSSGDGWASHDVSQGRKSAQTLGDKLPLPVTLSSLRNNLDDTD
EDSYQIGEFNFRTIHSVGVIMEKVSEDGKTTYTLHDPEKSEKTFYAIQFGQYDDGGSKFV
APGLIEDQRVRVMGKLKNVGGEKMILIYYLQQLGDDKDYQIFKLEAEVAELFFKKNLLEK
MRTGNTNGWTGMLAPPMTRYFDNFDANSFMHSEISKTPAAPIKIEQKLIQATPKTSSAFK
AKIRACIRSEAERGTYGNDDGVPFTKIMSRMNGVSEQALREILTEMENSGMIYAAKHEEY
MSLY
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaatggcaaacgacaaagtcttcaggatcaattcgaagcaaacatggatttcagcagc
ggtgacggatgggcctcgcacgatgtttcgcaagggagaaagagcgctcaaacacttgga
gataagcttccacttcctgtgactctctcttccctgagaaacaatttggatgatactgat
gaggattcatatcaaattggtgaatttaattttagaactattcattccgtcggtgtaatc
atggagaaggtttcggaagacggaaaaaccacttatactcttcacgatccagagaaatcc
gagaagacgttctatgctattcagtttgggcaatatgatgacggaggatcaaagtttgtg
gctcccggtttgatcgaggatcaaagggtacgagtgatgggaaagcttaaaaacgtcggt
ggcgagaaaatgattctcatatattacctccaacaattgggcgacgataaggactaccaa
attttcaagcttgaagctgaagttgctgagttattcttcaaaaagaatttgcttgaaaaa
atgcggactggaaacaccaatgggtggactgggatgctggctccaccaatgaccagatac
ttcgataatttcgatgcaaattctttcatgcactcggaaatttcaaaaactccagctgct
cctatcaaaatagaacaaaaactcatccaagcaactcctaaaacatcatctgcgttcaaa
gcgaagattcgagcttgcatcaggtcagaagctgaacgcggtacgtatggcaacgacgat
ggtgtcccattcaccaaaattatgagcagaatgaatggcgtgtcagaacaagctcttcgt
gaaatcctcactgaaatggagaacagtggaatgatctacgccgctaagcacgaagaatat
atgtctctgtattaa

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