Caenorhabditis briggsae (nematode): CBG_12495
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Entry
CBG_12495 CDS
T01054
Symbol
Cbr-syx-17
Name
(RefSeq) Protein CBR-SYX-17
KO
K08491
syntaxin 17
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04130
SNARE interactions in vesicular transport
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CBG_12495 (Cbr-syx-17)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_12495 (Cbr-syx-17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_12495 (Cbr-syx-17)
Membrane trafficking [BR:
cbr04131
]
SNARE
Syntaxin (Qa)
Stx-sER
CBG_12495 (Cbr-syx-17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
HEF_HK
CSN7a_helixI
ATG17_like
SlyX
DUF6376
V_ATPase_I
Prominin
bHLH_STRA8
DUF948
Bromo_TP
RasGAP_C
C19orf12
COG5_N
Motif
Other DBs
NCBI-GeneID:
8582017
NCBI-ProteinID:
XP_002640023
WormBase:
CBG12495
UniProt:
A0AAE9E2C3
A8XFW4
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Position
I:complement(9226464..9227413)
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AA seq
265 aa
AA seq
DB search
MTSSQRFSTLVHMYEKTANRQLGELRDLQRIALQGGLRDTPALRESISTYERDLEEGLRG
ILAVRGEMTDISQEHEFDSIIEPIRQQIKTLINVTKTLPVLAPPTGRNPFDQEERDLDDN
PYEMESRRYLQETTMKDNELRQLATDMKERAEATAKVEKDMADLEKIFQELGRIVHEQHD
VIDSIEEQIERANEDVKRGNENLKKAVKSKAAKAPIYAGLVGGLAVGGPVGMAAGSAIAG
IAAGVGGLVAGVYTGRFFKRSATTD
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcacagagattcagcacattggtacacatgtatgaaaaaacagctaatcgg
caattaggcgagttgagagacttgcaaagaattgcattgcagggcggtctcagagataca
cccgcactccgagaatcgatatctacgtatgaaagagatcttgaagaaggactgcgaggg
attctagctgtccgtggagagatgacagatattagtcaagaacatgaatttgattctata
atcgagccgatcagacagcagataaagacactgattaatgtgactaagacactacccgtt
ctcgctcctccaactggaagaaatccgtttgaccaagaagaaagagatttagatgataat
ccatacgaaatggaatcgagaagatatcttcaagagacaaccatgaaagataacgagtta
cggcagctggcaacagatatgaaagaacgagctgaagcgacagcgaaggttgaaaaggat
atggctgatttggagaagattttccaagagctcggtcggatagttcatgagcaacacgat
gtgattgattcgattgaagaacaaatcgaaagggcaaatgaggatgttaaaagaggaaat
gagaatttgaaaaaggcggtgaagtcaaaagctgcaaaggcaccgatttatgcaggtcta
gttggtggacttgccgttggagggcctgttgggatggctgctggttcggcaatagctgga
attgcagctggggtcggtggattagtagcaggagtctatactggacgatttttcaaacga
tcagcgaccactgattga
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integrated database retrieval system