Caenorhabditis briggsae (nematode): CBG_12510
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Entry
CBG_12510 CDS
T01054
Name
(RefSeq) Protein CBG12510
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00600
Sphingolipid metabolism
cbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CBG_12510
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
CBG_12510
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
8582032
NCBI-ProteinID:
XP_045094890
WormBase:
CBG12510
UniProt:
A8XFX9
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Position
I:complement(9267685..9270086)
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AA seq
653 aa
AA seq
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MFQQYRQSPAETSPVDDVVAICREISSNIISTERNVSVAKMIIHRLFRNPHIDLCSILPP
LIPQHYQDSPYAHIQSLVNGNSLFFETVLEDDQLCTDLWDSILNQCDVSAAPTDPAKDSV
LFSAVSQYVTRMLPCDESTSTSMSVPHPPKTTHQTIRTPLQLFRADSPLVNRISIEDRSQ
MMSVSNVSFQPRLVQNFCGFITKSCTTAQFTNANKLLLIRFLLKQFHVFCQFNTGDPEVD
NWKLDLMTSAPFKMPLFDFFKSSITQVPTSTVFRDIIMCWLTYARPWRYHNMSDPSDFPP
AAKYRQFFEQNVEFYEIILGKVIKRFSAFEIGEELIPSLRAVVEFSWKEPQTLLLRHIQL
DIQPHCLELLEHMQVVVRLNMATIRQEQEAHSGFWNMLFHSGESMKVQSCQRICNDLLAL
MKDSDSYVGTHLVQEMDVTDVPGTSNQAFNGSTEKCTSLLNETPKSGLGIPDHFIDAPSN
HMLLTPIGQRQVLNRERRFDFSKCAKDDPKGPIRSYELGLAVRFTTALAQKLNEFSLVKS
IGSHYSERTLIGSIVRKVMYPPVPNLDPNATVPAYSARIVRSPPLLRLRVRGPFTCIFIE
IKIFQYFASYQSIFLIIWFMMAMNYGFVFALVSIILIALFITTVCLVELDSVS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacaatacaggcagtctcctgcagaaacgtctcctgtagacgatgttgttgca
atttgccgagagattagttccaatattatttcaactgaacggaatgtttctgtcgcaaag
atgattattcatagactttttcgcaacccccatatcgatctctgttccattcttcctcca
ttgattccacagcattatcaagattccccatatgctcacattcaatctcttgtaaacgga
aactccttgttcttcgaaactgttcttgaggacgatcaattgtgtacggacctatgggac
agtattctgaatcaatgtgatgtttctgctgcgccaactgatccagcaaaggattcagtt
ttgttctcggctgtttctcaatacgtcaccagaatgttgccttgtgacgagtcaacttcc
acatccatgtcagttccacacccgccgaaaacaacgcatcaaactattcgaacaccactt
caactgttccgggcagattctccacttgtcaatcgaattagtattgaagatcgcagtcaa
atgatgtccgtgtctaatgtcagttttcaacctcgcctggttcagaacttctgcggcttc
atcaccaagtcttgtacaactgcccagtttacaaacgccaacaagttgctcttgattcga
tttcttctaaaacagttccacgtcttctgtcaatttaacaccggtgatcccgaagtcgat
aactggaaactagatctgatgacgtctgctccattcaaaatgccactctttgatttcttc
aaaagctccatcacacaagtaccaaccagtactgtcttccgagacattattatgtgctgg
ctgacttatgcccgtccatggcgctatcataatatgtctgatccatctgacttcccacct
gctgctaaatacagacaattctttgagcagaacgtcgagttttatgaaataattcttggg
aaggtcatcaaaaggttctcggcattcgaaattggcgaagaactgattccatccttgcgg
gctgtagtcgaattttcctggaaagaaccccaaactctactgctccgtcatattcagctg
gacattcagccacattgcctcgagctattagaacatatgcaagtcgttgttagattgaac
atggctacaattcgacaggaacaggaagcacattctggcttctggaatatgttgtttcat
agtggggaatccatgaaagtccaatcatgccaacggatttgtaatgacctcttagcactc
atgaaggacagcgattcgtatgttggaactcatttggtgcaggaaatggatgtgactgat
gtacccggcacatcaaatcaagcattcaatggatccacagaaaaatgcacatctcttctc
aatgagactccgaaatctggccttgggattcctgatcatttcatcgacgctccatcgaat
catatgcttctcactccaattgggcaacgacaagttttgaatcgcgaaagacgtttcgat
ttctcgaaatgtgccaaagacgatcctaaaggaccgattagaagttacgaactcggcctc
gctgttcgattcacaacggctttagctcagaaactcaatgagttttctctcgtgaaaagt
atcggatcacactactcggagcgaactttgatcggatcaattgtgcgcaaagttatgtac
ccaccagtcccaaatcttgatccgaatgcaacggttccagcctattcagctaggattgta
aggtctcctcctttactccgtctcagggttcgtggaccgtttacatgtatattcattgaa
atcaagatttttcagtactttgccagctatcagtccattttcctcatcatctggtttatg
atggctatgaattacggattcgtcttcgcgctggtttcaataatccttatcgctctgttc
atcactacagtttgcctcgtagaacttgattctgtgtcttaa
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