KEGG   Caenorhabditis briggsae (nematode): CBG_12546
Entry
CBG_12546         CDS       T01054                                 
Name
(RefSeq) Protein CBG12546
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CBG_12546
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cbr01009]
    CBG_12546
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_12546
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_12546
   03041 Spliceosome [BR:cbr03041]
    CBG_12546
Enzymes [BR:cbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     CBG_12546
Protein phosphatases and associated proteins [BR:cbr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     CBG_12546
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CBG_12546
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CBG_12546
Spliceosome [BR:cbr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    CBG_12546
SSDB
Motif
Pfam: Metallophos
Other DBs
NCBI-GeneID: 8582059
NCBI-ProteinID: XP_002640064
WormBase: CBG12546
UniProt: A0AAE9DX34 A8XG05
LinkDB
Position
I:complement(<9424003..>9425291)
AA seq 353 aa
MQMPTTKKEKTECTETASNTNLVSTRTRSTTMLTDEDKEKEKELTRQAYSILMRVLESGK
HPDYQLPQVIPVEECIDFAGKVGTVFNKQATLIEISAPINICGDIHGQFCDLLRLFDKNG
FPHRANYLFLGDYVDRGRYCLETILLLFAYKAIFPNHFFLLRGNHECPNINKIYGFYDEI
QRRYNNLAVWEAFQSAFTHMPLAALVGGKILCMHGGISEKLTSLQDIRNIIRPIYNPDVD
SLAIDILWSDPTNFSNYWSPNTRGVSVTFGKCALWKALKTLDIDMVVRAHQVVQDGYEFF
GNKRLVTIFSAPFYCGQFDNAAAVLNVAPNLICSFVVLRPKKKIARRRLMPAK
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgcaaatgcctacgacaaaaaaggaaaaaaccgagtgcaccgagactgctagcaacacc
aaccttgtttctactcgaaccagaagcacgacaatgctcactgatgaggataaggagaag
gagaaggaactgactcgtcaagcctacagtatcttgatgcgtgtattggaaagtggcaag
catccggactatcagttaccacaggttattccagttgaagaatgtattgactttgctggg
aaagtcggaacagtcttcaataaacaggcgaccctgatcgagatatctgctccaatcaac
atctgcggtgacattcatggacaattctgtgatcttctgcgtctcttcgacaaaaatgga
tttcctcatcgtgccaattatctgttcctcggagactatgtggatcgtggaagatattgt
ctggagactattctactgctcttcgcttacaaagcaattttcccaaatcactttttctta
ttgagagggaatcacgaatgtccgaatatcaacaaaatatacggattctatgacgagatt
caacgtcgttacaataatttggcggtttgggaggcatttcagtcagcattcacgcatatg
ccgctcgctgcacttgtcggtggaaagatcctttgcatgcatggaggaatatctgaaaag
ctaacctctctccaagatatccgaaacatcattcgtcccatctacaatccagacgtggat
agtctcgccatcgacatcctttggagtgatccaaccaatttttcaaactattggagtcca
aatactcgtggcgtttctgtcactttcggaaagtgtgctctctggaaagctctcaaaact
cttgatatcgatatggtcgtccgtgctcatcaagttgttcaagatggctacgagtttttc
ggtaacaagcgtcttgtgaccatattctctgctccattttattgtggacaatttgacaat
gcggctgccgtattgaatgtagctcctaatctgatttgctcgtttgtggttctccgtcca
aagaagaaaattgctagacgtcgacttatgccagcaaaataa

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