KEGG   Caenorhabditis briggsae (nematode): CBG_12588
Entry
CBG_12588         CDS       T01054                                 
Name
(RefSeq) Protein CBG12588
  KO
K12886  heterogeneous nuclear ribonucleoprotein K
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_12588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbr03041]
    CBG_12588
Spliceosome [BR:cbr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    CBG_12588
SSDB
Motif
Pfam: KH_1 KH_2 KH-I_KHDC4-BBP KH_KhpA-B KH_BICC1 KOW2_Spt5 Microp_apicomplexa_9
Other DBs
NCBI-GeneID: 8582095
NCBI-ProteinID: XP_002640100
WormBase: CBG12588
UniProt: A0AAE9DY09 A8XG41
LinkDB
Position
I:9560870..9562896
AA seq 398 aa
MMIKVPTSVIGTDSPKAMKREHENDEGDRSSRHKRQKTDGFTEAIQQGKFEVRLLVSSKS
AGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFS
ERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK
NVLAIIEEVMKELKEIPIKGSATPYLPSFHYDPSNISEYGGFPGNVSGGGPQNNRGPAPP
RGGQGPPGGPRSYGGAITPGGGPRSFEAGDFHQFRGGPVPGQYSMNAPGYAQGPPQGQFG
APANAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSNGQP
ERIITIKGTEQQIHSAQYLLQQCVRNSTQGRERFGGNV
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgatgatcaaagttccaacgtctgtaattggaacggacagccccaaggcaatgaaacgt
gagcacgagaacgacgaaggagatcgttctagtcgtcacaagcggcagaaaaccgatggt
tttactgaggcaattcagcagggaaagttcgaagttcgtcttctagtgagcagcaagtcc
gcgggagctatcatcggaaaaggtggtgaaaatatcaagcgtcttcgtgccgagttcaac
gcccatgtccaagtccccgactcgaatacccctgaacgtgtttgcaccgtcaccgccgat
gagaaaacagtcctcaacattttgaaggatgttcttcctcgtcttgaagataatttctct
gaacgagacccttgcgaggttcgtgtgctcatccatcaatcacatgcaggagccctcatc
ggtcgaaacggaactaaaatcaaggaactccgtgaaaagtgctctgcacgtttgaagatt
ttcactggatgtgcccctggatccacagatcgtgttctcataacatctggagaacagaaa
aatgttctggctataatcgaggaagtcatgaaagagctcaaggagattccaatcaaagga
tccgcgactccatatcttccaagtttccattacgatccgtccaacatctccgaatatgga
ggtttccccggaaacgtttcgggtggaggaccacaaaacaatcgtggaccagctcccccc
cgtggaggacaaggcccacccggtgggccgagatcgtatggaggagcaattactccagga
ggaggcccaagatcctttgaagctggagattttcatcaattccgtggaggaccagttcct
ggacaatactcaatgaatgctccaggttatgcacaaggcccaccgcaaggacaatttggt
gcaccagctaatgctggatacggctatggaccaggaggcggtggaccggttacaactgct
caggtgacgattccatcagatttgggaggcaccataattggacgaggaggtgagcgtatt
gctcgaattcgtcaagagtcgggtgcgcaaattactctcgagccaagcaacgggcagccc
gaacgcatcataaccatcaagggaacagaacaacaaattcacagtgctcaatatcttctt
caacaatgtgtccgtaactcaacacaaggtcgcgagcggtttggaggaaacgtttaa

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