Caenorhabditis briggsae (nematode): CBG_12588
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Entry
CBG_12588 CDS
T01054
Name
(RefSeq) Protein CBG12588
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_12588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_12588
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
hnRNP proteins
CBG_12588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_BICC1
KOW2_Spt5
Microp_apicomplexa_9
Motif
Other DBs
NCBI-GeneID:
8582095
NCBI-ProteinID:
XP_002640100
WormBase:
CBG12588
UniProt:
A0AAE9DY09
A8XG41
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All DBs
Position
I:9560870..9562896
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AA seq
398 aa
AA seq
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MMIKVPTSVIGTDSPKAMKREHENDEGDRSSRHKRQKTDGFTEAIQQGKFEVRLLVSSKS
AGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFS
ERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK
NVLAIIEEVMKELKEIPIKGSATPYLPSFHYDPSNISEYGGFPGNVSGGGPQNNRGPAPP
RGGQGPPGGPRSYGGAITPGGGPRSFEAGDFHQFRGGPVPGQYSMNAPGYAQGPPQGQFG
APANAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSNGQP
ERIITIKGTEQQIHSAQYLLQQCVRNSTQGRERFGGNV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaaagttccaacgtctgtaattggaacggacagccccaaggcaatgaaacgt
gagcacgagaacgacgaaggagatcgttctagtcgtcacaagcggcagaaaaccgatggt
tttactgaggcaattcagcagggaaagttcgaagttcgtcttctagtgagcagcaagtcc
gcgggagctatcatcggaaaaggtggtgaaaatatcaagcgtcttcgtgccgagttcaac
gcccatgtccaagtccccgactcgaatacccctgaacgtgtttgcaccgtcaccgccgat
gagaaaacagtcctcaacattttgaaggatgttcttcctcgtcttgaagataatttctct
gaacgagacccttgcgaggttcgtgtgctcatccatcaatcacatgcaggagccctcatc
ggtcgaaacggaactaaaatcaaggaactccgtgaaaagtgctctgcacgtttgaagatt
ttcactggatgtgcccctggatccacagatcgtgttctcataacatctggagaacagaaa
aatgttctggctataatcgaggaagtcatgaaagagctcaaggagattccaatcaaagga
tccgcgactccatatcttccaagtttccattacgatccgtccaacatctccgaatatgga
ggtttccccggaaacgtttcgggtggaggaccacaaaacaatcgtggaccagctcccccc
cgtggaggacaaggcccacccggtgggccgagatcgtatggaggagcaattactccagga
ggaggcccaagatcctttgaagctggagattttcatcaattccgtggaggaccagttcct
ggacaatactcaatgaatgctccaggttatgcacaaggcccaccgcaaggacaatttggt
gcaccagctaatgctggatacggctatggaccaggaggcggtggaccggttacaactgct
caggtgacgattccatcagatttgggaggcaccataattggacgaggaggtgagcgtatt
gctcgaattcgtcaagagtcgggtgcgcaaattactctcgagccaagcaacgggcagccc
gaacgcatcataaccatcaagggaacagaacaacaaattcacagtgctcaatatcttctt
caacaatgtgtccgtaactcaacacaaggtcgcgagcggtttggaggaaacgtttaa
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