KEGG   Caenorhabditis briggsae (nematode): CBG_12657
Entry
CBG_12657         CDS       T01054                                 
Symbol
Cbr-xpg-1
Name
(RefSeq) Protein CBR-XPG-1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBG_12657 (Cbr-xpg-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_12657 (Cbr-xpg-1)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CBG_12657 (Cbr-xpg-1)
SSDB
Motif
Pfam: XPG_I XPG_N XPG_I_2 DUF2756
Other DBs
NCBI-GeneID: 8582153
NCBI-ProteinID: XP_045094933
WormBase: CBG12657
LinkDB
Position
I:complement(9796705..9799458)
AA seq 880 aa
MGIAGLWKIIEPTATEIPLECLEGKKLAIGIMNHSKYKNNSFVDVSIWIYQAQLAYPSDQ
PFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPVLKRQVLESRRQKRKNDDDILTNPKKMG
KLKVFIATPLFKKWIHFQEIASGGLDEDALSKAIKEVISPSKKVVLSDVYKDIPSTSTNL
DLPSAHQNDQLVYGEIESSEEDSDDSDVIVETLVKKEEPDQKMFPSRKMEIRNLVEKREV
MRNSRLRPDMNLNLKNRPKKFQIPQDSKSFSNFQMQRLLQRGRLNAQIEQLAKSNTTSSG
AFSSDKINVTGPDGTSHVLKYAHSDEIQECQPELKREFDSLYQPPLEMTLDVFNVEYGGK
KLSREVTPDDVREEIVERIEERLIDKTERGYQSKSGMLEAIARKRIRQHYGTEIIEDKEE
ERRRRGEEEEEDDLIEVSDDEMALQKALFESASKALDEKMAILKKHRPDSDDEEWDPQRN
DIPSTSSAAQRNLTDDYIHLNYDDDNERTPELYRDLQEFLTNAGIPWIEAPGEAEAQCVE
LEKLGLVDGVVSDDSDVWAFGVKHVYRHMFAKNRRVQRYGEQTAANRDNCKLFCLQREDY
ISIAILAGGDYCPGLVKVGAIGALELVSEFVEKRNDQSETIDIIENRILQLLEKAGQLFL
SSPDEKRFNSRKALILKRHVTEANERELIENVCSNKDAVHAYLHPTVDDSSEKLRWRQMN
IPLIRQILHQRLQWPDRTQHHEEQNSFNAFVKWNQFLQAGGRSQMRLDRFFAQKLDSALE
LKWSKKVVEALEKIGKRTKGVSLDEEKLVDQKKDDEIKVLEIKKKERNPPEKKKATHGRG
RGRGRGRGRGGAKISKTTEKKELNLSEDSSSNDSFDDFCK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgggaatcgccggtttatggaaaatcattgaaccaacagccactgagattccactcgag
tgtcttgaaggaaagaagttagcgattggtattatgaatcattcaaaatataaaaacaat
tcatttgtagatgtttctatttggatttatcaagctcaactcgcctacccatcagaccaa
ccgtttcctcatttacgactcctcgtgaatcgcctctccaaacttctcttttataaaatt
cgcccagtttttgtttttgatggaccacaagtcccggttttgaagaggcaagttttggaa
tcaagacgacagaagcgaaaaaatgatgacgatattttgacgaatcccaagaaaatggga
aaattgaaggtttttattgccactccattgtttaaaaaatggatccatttccaggagatc
gcatctggtggattggatgaggatgcactttcaaaagctatcaaagaagttatcagtcct
tcgaaaaaagttgttcttagcgatgtatataaagatatcccatctacaagcactaaccta
gatttgccatctgcccatcaaaacgatcaattggtttatggcgaaattgaaagttcagaa
gaagattcagacgatagtgatgtaattgttgaaacgctagtgaagaaggaagagcctgat
cagaagatgttcccatctagaaaaatggaaattcgaaatttagtagagaaacgagaagtg
atgagaaatagcagacttcgtccagatatgaacttaaatttaaaaaatcgaccaaaaaaa
tttcagattccgcaagattcgaaaagtttcagcaatttccaaatgcaaagacttctccag
cgtggtcgattgaatgctcagattgagcagctagcaaaatcaaatacaacatcttctggt
gctttttcttctgataaaattaatgtgacaggacctgatggaacctcccacgttttgaaa
tatgcgcacagcgatgagattcaagaatgtcagccggaactgaaacgagagtttgatagt
ctatatcagccaccattagagatgactcttgacgtttttaatgtggagtatggtgggaaa
aagttgagtcgagaagtgacaccagatgacgtcagagaagagattgtagaaagaattgaa
gagcgattaattgataaaacggaaagaggatatcaaagtaaatctggaatgttggaagcg
attgctagaaaaagaattaggcaacactatggaacggaaattattgaggataaagaagaa
gagagaaggagaagaggagaagaagaagaagaggacgatttgattgaagttagtgatgat
gaaatggctcttcaaaaagcgcttttcgaatctgcgtcgaaagctttagatgaaaaaatg
gcaattcttaaaaagcacagaccagacagcgacgatgaagaatgggatccgcagcgcaac
gatattccatccacatcgtcagcagctcaaaggaatctaacagatgattatattcatctg
aattatgacgatgataatgaaagaactccagaactgtatagagaccttcaagaattcctc
actaatgctggaatcccttggatagaggcgccaggagaagccgaagcacagtgtgtagaa
ttggaaaagcttggactagtagatggagttgttagcgatgatagtgatgtctgggctttt
ggagtgaaacatgtctatcgacatatgtttgcaaagaatcgacgagttcagagatacgga
gaacaaaccgcagcgaaccgagacaactgtaaacttttttgtctccaaagagaagattac
atttcaatcgccattctagctggaggtgattattgtccgggacttgtcaaagtgggtgct
attggagctctagaactagtttcagagtttgtggaaaaacggaatgatcaatcggaaaca
attgatattattgaaaacaggattttgcagcttttggaaaaagcaggacaattatttctg
tcttctccagatgaaaaacgtttcaatagtcggaaagctctgatattgaagagacatgta
acggaagcgaatgagagagaactgattgaaaatgtgtgttccaataaagatgcggtgcat
gcatatcttcatccaaccgtagatgattcttccgaaaaactgcgatggcgtcagatgaac
attccactcatccgccagatcctccaccaacgccttcagtggccagatcgaacacaacac
catgaagagcaaaactcttttaatgctttcgtaaaatggaatcagtttctacaagctggt
gggcggagtcagatgaggttggatcggttcttcgctcaaaaattagacagtgctctagaa
ttgaaatggtcgaaaaaggtcgttgaggccctagaaaagattggaaagagaacaaaagga
gtttcactggacgaagagaaattggtggatcagaaaaaagatgatgagataaaagtgctt
gaaatcaagaaaaaggaaaggaatcctccggagaagaagaaagctacacatggcagggga
agaggaagaggacgtggcagaggaagaggcggggcgaagatttctaaaacaacggagaag
aaagagctgaatctctccgaggacagtagttcaaatgattcattcgacgacttttgtaaa
taa

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