Caenorhabditis briggsae (nematode): CBG_12735 Help Entry CBG_12735         CDS       T01054                                  Symbol Cbr-smg-1 Name (RefSeq) Protein CBR-SMG-1   KO K08873   serine/threonine-protein kinase SMG1 [EC:2.7.11.1] Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CBG_12735 (Cbr-smg-1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:cbr01001]     CBG_12735 (Cbr-smg-1)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cbr03019]     CBG_12735 (Cbr-smg-1) Enzymes [BR:cbr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.1  non-specific serine/threonine protein kinase      CBG_12735 (Cbr-smg-1) Protein kinases [BR:cbr01001]  Serine/threonine kinases: Other   PIKK family [OT]    CBG_12735 (Cbr-smg-1) Messenger RNA biogenesis [BR:cbr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      CBG_12735 (Cbr-smg-1)    mRNA cycle factors     Common to processing body (P body) and stress granule      CBG_12735 (Cbr-smg-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PI3_PI4_kinase SMG1 FATC HEAT_ATR FRB_dom HEAT_EZ DUF5764 DinB Motif Other DBs NCBI-GeneID:  8582220 NCBI-ProteinID:  XP_045094958 WormBase:  CBG12735 LinkDB All DBs Position I:10123939..10133233 Genome browser AA seq 2313 aa AA seqDB search MLTSKNNDIGNLIEIFRQRDITYKERKATLQKIEELIPKVPDLEALNTKWIYLLDNAVWP LIVKSDRMDLKSLAGKVTRHVGALLFDSPFYPEFLLWLGTLLQNTPKKNDDARADIVFSV YYIVGAISQKSENRLGKNDEEYVRKSLEWLIRVIPNSSSAVYNNCLKGIILISNTFRKVT DDLYESCLRAIVSNFPDFNSHEKNFERLLDTVNLFSDHFSKDPVLAEEMVRIIRPDIKKN GLRNTRELKKRLKLTMAIVKMAKSQQILVETNEMMCELQAELEGNGGKWSSAALITIICD LLNELLILGKNDAEMRQSVEESLGNLLKDLNLSKQNTKEKQAFFNSLAKIVKQLPAESDV KTRIHHIVFNSDTGLFNIQNDDNRIFGHNTIYRDLVNLISVLLTPTSLSHLQATYTDLRK IMMESMSKLKQSERWHESILLLFFSALQGISCAKSSLIVMIGIRPSIFELFCDELPLTEY WLASNHPEVYHIFITILVGHLKAHDFYVSQSDYLVHGETPTGHAYGQTKREYVRKQVIAL HKIIGGFGNRLWKKTRFLISTWLHSLVVIARDQKISAESFRLKEWVRLRNTVIQHSVLDW NNESINQALTVLSTVTNWSALPLELNKDITDKTKKATWKEATTIWESGDFKTYIRQSLST TYQMSQERQQKQIGSTSFGAEEFNLVTNFLLKQIVPTTFKKGPYVWMDEVLETAIQGCKN ISQEKSDVPETFMEKWDWIINQTANFCIVNKMKTPLGKPMQTFAAFENEIKRLAKEVINR KSSDKKPKSTTEDVPPPATPPLKFSIQWLRVHLLLKLIEVLEKIMISSIRGGSSIFNLTE IPVTARQFFIMNSSSCEVWLNRVYYPALIVAYFNGYYGLVIRFGSNALNHYARQKGSDEK MITNGVCTACLMSLSMAVLGEPMEIVGLRRRVREEFGTEMGQKLMEALGEMASARYEIAL VQLEAILVVDSSINETLRIIIQIAITDMLNRIRLPDAVRYYKKTLFGEDEEAQVAEDFRS IEMLTKFEKLNYGVAEKRQVVDWSARERLQLVESAYSQTMKRNELLELQKEMSAMGALAL SADSSCKLYSDISSTSLVIANLVDRMTGTSHWKNQLTDVEMFDRAEEGNEGDKLTICRKL MHWGRHMKHHRGQSFAAHGEIIRFSRKTSNCELAFFHINSAIRGEKLEAWQRLEVERQRL KLVKSQHFDVRVREMNEVFGSLADVFSTSIEMKQKFQNLDDQTKDLMVANGYLSDIAKRE EHMSRASIQLADFFDTLPTIDTVLTPNLYNTIIWSEIQSRSNSLSCGYAGLVGALYNLSA DLCPSLAKAHLKMAKWTYEMAKIENFPNISPFALYQFGQTAQENEELWRSLDATSLVNLE KQVRKIVPDAMRASVLLSPNNPYLLLWEAASAHRRKFLCITVSSYFQFIHNMSGDFECLP YSKREETTLATLRILEMLVKHGEVLVDVINDGLSRTNVHVWKEILPQLFARLSHPSDHIR KTLVDLISRVCTAAPHAVVFQVVSGAASSTEVSDLEEQQNDDRNRVRACCEQLETKMAQS YPNLVRDVRQFVAELERINLLNEEKWSVVLGTMEHEMEKRLALIKAENAKTDFSMHLMPK QKDEIISKKTKLLTRQIFDVLDELYEKTIVAQPETENEKEFFNTFSEMLTKAHTESKNNR YNSPEASWAPFKNLVSNFAHRTNKKGMQTFQTADISQYLATLGKSCVPMPGQESVEFDRV VSIARVADNVTILPTKTRPKKLGFIGSDGKQLAFLFKGREDLHLDERVMQFLRLCNVMLQ SEKGKSRQIAEYQAHHYAVIPLGPRSGLIKWVEGATPIFHIYRKWQMKEKALKQATKKNG ETVPEIEKPTNMYHNMIRQAFTAHNIDAIIASDRSKWPAQILEEVFDGLCSKTPTDLISR EIWMRANDSTAWWAVTKRYARSLAVMSMVGSVLGLGDRHLDNLLVDLKYGHVVHIDYNIC FDKGKILRIPETVPFRLSRNMRHALGPSDMYGTFRESCVHVLSTLRSGHQVLTMLLDAFV FDPLVDWTSHDNISTSGGVSLALQLAVYGSSWKAKARERLTDTIELFQLRVTELQALWMS NREDLYHWMKQVTDCLLAEQSIMGMNGAYAQQRVKAGTELREAVARHQALAKEFRPLIRV IGKEKEEFADYLKFYKQAFIDPLLKGHSALRHELDIDTCVQNFNIVMQNIDVVFMSLISL STMPIDSVSSRASQKQFNAPPGLENVWVLQQEQQENSQAREVVRRVERRLNGWLDGSAPD RKLSPREEADVLIAEATSSANLAQMYEGWTAWV NT seq 6942 nt NT seq  +upstreamnt  +downstreamnt atgttaacatcgaaaaacaatgatattggaaacttgatagaaatttttcgtcaacgagac atcacttataaggagcgaaaagcaacccttcaaaaaatcgaggagcttattccaaaagtt cccgatttagaagcactcaacacaaaatggatatatcttttggataatgccgtttggccg ttgattgtaaaatctgatcgaatggatttgaagagtctagctggaaaagtcaccagacat gtcggagctcttctctttgattcacctttttatccagaattcctcctttggctaggaact cttctccaaaacacaccgaagaaaaatgacgacgcacgagcagatatcgtattctccgtc tactatatagttggagctatcagccaaaaatccgagaatcgcttgggaaaaaacgatgag gaatatgttcgaaaatcgttggaatggctgattcgagtgattccaaactcgtcgagtgca gtttacaataactgtttgaaagggattattctcatctcaaacacctttcgaaaagttaca gatgatttgtatgagtcatgcctacgagccatcgtatcgaatttccctgatttcaatagc catgaaaagaattttgagcgacttctggacaccgtcaacttgttttccgatcacttctca aaagatccagtgctcgcagaggagatggtacgaatcatccgacccgatattaaaaagaat ggactacgaaatacaagagagttgaagaaacggctaaaattgactatggctattgtgaaa atggccaagagtcagcagattctagttgaaaccaatgagatgatgtgtgagttacaagca gagctggaaggaaacggtgggaaatggtcgtctgctgctcttatcaccatcatatgtgac cttcttaacgaacttctgatccttggaaaaaatgatgcggaaatgcgacaaagtgttgaa gaatcgttaggaaatcttctaaaagatttgaatctgtcaaagcaaaacacgaaagagaaa caggcatttttcaactcattagcgaagattgtcaaacaacttcccgcggagtcagatgtc aaaactcgaatccatcatattgttttcaattcggatactggtctattcaatatccagaat gatgataatcgaatttttggacataatacgatctatcgagacttggtcaatttgatttcc gtccttttgacaccaacttctctcagtcatcttcaagcgacatacactgatttgagaaag ataatgatggaaagcatgtcgaaactgaaacaaagtgaaagatggcatgaatccatactt ctcctgttcttctctgcgttacagggaatatcatgtgcaaaaagctcgcttattgttatg attggaatccgtccgtcgattttcgaattgttttgtgatgaactaccgctgacagaatat tggctcgcttctaaccatccggaagtctatcatatcttcataaccattctggttggacat ctcaaagcacacgacttctatgtttcccaatctgactatttggttcatggagagacacca accggacacgcctacgggcagacgaaacgagaatatgtcagaaagcaagtcattgctctc cataaaattatcggtggttttgggaatcggttgtggaaaaagaccaggttcctcatctcc acttggcttcattcccttgtcgttatagcacgcgatcaaaagataagtgccgagagtttc agactaaaagaatgggttcggttgagaaatacagtaatccagcattcagtactcgattgg aacaatgaaagcatcaaccaagccttgaccgtcctttcaacagttaccaattggtcagca ttgcctctagagttgaacaaagatatcactgataaaacaaaaaaagccacatggaaggaa gcgacgacgatttgggaatctggagattttaaaacctatatcagacaaagcctatcgacc acctaccaaatgagtcaggaacggcaacagaaacagattggttccacgagttttggagcg gaggagttcaatttggttacgaatttcctgctcaaacagattgttccaactacattcaaa aaaggcccatatgtgtggatggatgaagtacttgaaacggcgattcaaggatgtaagaac atctctcaagagaagtcagacgtgccagaaacgtttatggagaaatgggattggattatt aatcaaactgcaaatttctgtatcgtcaataaaatgaaaactccattggggaaaccaatg cagacgtttgcagcttttgagaatgaaatcaaacgactcgccaaagaggttatcaatcgt aagagtagtgataagaagccgaaatccacaacagaagacgttccaccaccggcaactcct ccattgaaattttccattcagtggcttcgtgttcatcttcttttgaaactaattgaagtt ttggagaagatcatgatttcttcaatccgcggtggttcttccattttcaacttgacagag attccagttactgcccgacaattcttcataatgaactcttcgagttgcgaagtttggctc aatcgagtctactatccagcactcattgttgcttacttcaacggatactatggcttggtc attcgatttgggtccaatgctctcaatcactatgctcgtcaaaagggttccgatgagaaa atgattacgaatggtgtctgcactgcttgtctcatgtctctctcgatggctgttctaggg gaaccaatggaaattgttggattgagacgaagagttcgagaagagtttggaacggaaatg ggtcagaagttaatggaagcgctaggagaaatggccagtgcaagatacgaaatcgcattg gtgcaactcgaagctattcttgttgttgatagcagtatcaacgaaactcttcgtatcatt atccaaattgcgataactgacatgctgaatcgaatccgccttccagacgctgtcagatat tacaagaaaactctatttggagaagacgaagaagcacaagtagcggaagatttcagatca attgaaatgctcacaaaattcgaaaagctgaactacggtgttgccgaaaagagacaagtt gttgattggagtgctcgtgaacgtcttcaacttgttgaatccgcatattcacagactatg aagagaaacgaactcctcgaactgcaaaaagagatgtcagcgatgggagcacttgcattg agtgctgattcatcgtgcaaactgtattcggatatatcttccacatctcttgtcatagcg aatctagtcgatcgaatgactggaacatcgcattggaaaaatcagttgaccgatgtggaa atgtttgatagagccgaagaaggaaacgagggagataagctgacgatctgtagaaaactg atgcattggggacgacacatgaaacatcatcgtggtcaatcgttcgcagctcatggagaa atcattcgtttctctcgaaagacttccaactgtgaacttgctttcttccatataaattca gcgattcgaggggagaaactggaagcttggcaacgtttggaagttgagagacaacgattg aaacttgtaaaatctcaacattttgatgttcgagttcgagaaatgaatgaagtttttgga tcgttggctgacgttttcagcacaagtattgagatgaaacagaaattccagaatcttgac gaccaaacgaaagatttaatggtagccaatggatacctgagtgacattgcaaaacgagag gagcacatgagtcgagcaagcattcaactcgctgatttctttgacacacttccaactatc gataccgttctcactccgaacttatacaataccatcatttggtctgaaattcaatcccgc tcgaacagtttatcatgtggctatgctggtttggttggtgctctctacaacttgtccgcc gatctatgtccttcacttgcgaaagctcatctcaaaatggcgaagtggacatacgagatg gcgaaaattgagaacttccctaatataagtccattcgccctctaccaatttggacagacg gcacaagaaaacgaggagctgtggaggagtttagatgcgacgagtcttgtgaatctggag aaacaagttagaaaaattgttccggatgccatgcgagccagtgttcttctctctccgaac aatccatatctgcttctatgggaagcagccagcgctcaccgtcggaaattcctttgcatc acggtctcttcgtatttccagtttatccacaacatgtccggagactttgagtgtcttccc tactcgaaacgagaagagaccactctggcgactctgagaattctggaaatgcttgtgaag cacggagaagtgttggttgatgttataaacgatggattgagcaggaccaatgttcatgtt tggaaagaaatcctcccgcaactcttcgctcgcctttctcacccatctgatcacattcgt aaaactctggttgatctgatatctcgtgtctgtacagctgctccacacgcagtcgttttt caagttgtctctggagcagcttcatccactgaagtgtctgatctggaagagcaacagaat gatgatcgcaatcgagttcgtgcttgctgtgaacaactggaaactaaaatggctcagtcg tatccgaatctcgtcagagatgtccgccaatttgttgctgaattggagcggatcaatttg ctgaacgaggagaagtggtcggttgtactaggaaccatggagcatgaaatggaaaagaga ttagcgttgataaaagctgaaaatgccaaaaccgacttttcaatgcatttgatgccaaaa cagaaagatgaaatcatttcgaagaagaccaagctacttaccagacagatctttgatgtt cttgatgaactctacgagaaaacgattgtggcacaacctgagactgagaatgagaaggaa ttctttaacacattctccgaaatgttgacaaaagctcatacggaatcgaaaaacaatcga tacaactctccagaagcttcttgggcgccattcaagaatctggtttcgaacttcgctcac agaaccaacaaaaaaggaatgcaaacgttccaaacggcggatatctcccaatatttggct actctcggaaaatcatgtgttccaatgcctggtcaagaatctgttgaatttgatcgtgtc gtttcgattgctcgtgtcgctgataacgttaccattctccctaccaaaacaagaccaaag aagctaggattcattggatccgatggaaaacaactcgcattcttgttcaaaggacgcgaa gatcttcatctcgatgagcgtgtcatgcaattcctccgtttgtgcaatgtgatgcttcag tctgagaaaggaaaaagccggcagattgctgaataccaagcacaccattacgctgtaatt ccactcggacctcgttcaggacttatcaaatgggttgagggagctacaccgatcttccac atttatagaaagtggcagatgaaagagaaagctctgaaacaagctacgaagaagaatgga gagacggttccggaaatagagaaaccaacgaacatgtaccacaatatgatacggcaagca ttcactgctcataatatcgacgccataatcgcttcggatcgttcgaaatggcctgcccaa atccttgaggaagttttcgatggtctatgttccaaaacaccaacagatttgataagtcgt gagatatggatgcgtgctaatgattccactgcgtggtgggcagtcactaaacggtatgca agatcgctggcagtgatgagtatggttgggtcggtattgggattgggagacagacatttg gataatctattggtggatctgaagtacggacatgtagttcacattgactacaatatttgt ttcgacaagggaaagatcctgagaattccggagaccgtaccattccgcttgtctcgaaac atgcgacacgctcttgggccatctgacatgtacggtacattccgcgaatcatgtgttcat gttctatcgactctccgttctggtcatcaagttttgacgatgcttcttgatgcattcgta ttcgacccactagttgattggacctcccacgataacatttcaacgtctggaggtgtctca ttggctcttcaattggctgtttatggaagtagctggaaagcaaaagcgagagaaagattg acggatacgatcgaattgttccagttgagagtcactgaattgcaagcactttggatgagt aatcgagaagacctataccattggatgaaacaagtgactgattgtcttctcgctgaacag agtatcatgggaatgaatggagcttatgctcaacaacgagtgaaagcaggcaccgagctt cgagaagcagtcgcaaggcatcaggcgctagccaaagagttccgtcctttgatacgcgtg ataggaaaggagaaagaagagtttgccgattatctgaagttctacaagcaggcatttatt gatccacttttgaaaggacactcagctctccgtcacgaattagacattgacacttgtgtg cagaatttcaatatagtcatgcaaaacattgatgtagtattcatgagtctgatcagcctc tccactatgcctatagactcggtctcttcgcgtgcttcacagaagcagttcaatgcaccg ccgggactcgaaaatgtttgggttttgcaacaagagcaacaggagaattcgcaagctcga gaagtcgtccgacgtgtcgaaagacgactgaacggatggctcgatggttctgctccggat aggaagttgtcgcctcgagaagaggctgacgtacttatcgcagaagcaacatcatctgcc aatttggcacaaatgtacgaaggttggacagcttgggtctga

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