Caenorhabditis briggsae (nematode): CBG_12840
Help
Entry
CBG_12840 CDS
T01054
Name
(RefSeq) Protein CBG12840
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_12840
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
8582302
NCBI-ProteinID:
XP_002640306
WormBase:
CBG12840
UniProt:
A8XFQ7
LinkDB
All DBs
Position
I:complement(10583145..10584307)
Genome browser
AA seq
273 aa
AA seq
DB search
MDPMFNINFQSATMMMPEFPPVQGQKPTPYDKKKDPNHVKRPMNSFMVFSQAERKKITMA
QPHLHNAVISQQLSKKWKDMTPEEKDPYVKEADKLKMEHALQNPGYKYQPRRKLKGVPSK
STVSDENSEGKKATPQRKNAQPMAQIQQYPGSSNQMSFPMQSFGFYGHQPHTQNPQGQIH
GGGHPYFNHGLAPMVDQMTNNYYDFSSQQNYQHDYTMYAPIQNRTSSNESSESWNTTTSS
LMPTSSESRAPSALTVDEFPGINAGFVFPKYEF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggacccaatgttcaacatcaactttcagtcagcaacgatgatgatgccagaattccct
cctgttcaaggccaaaagccaaccccatatgataagaaaaaggacccaaatcatgtcaag
cgccccatgaactcattcatggtgttctctcaagcggagcgaaagaaaatcaccatggct
cagccgcatcttcacaacgctgttatcagtcagcagttatccaagaagtggaaggacatg
acgccagaggagaaggatccgtatgtcaaggaagcggataagttgaagatggagcatgca
ttgcaaaaccctggatacaagtaccaaccacgtcgtaaactcaagggtgtaccatcaaag
agtacagtatctgatgaaaatagcgagggaaaaaaggccaccccacaacgaaaaaatgct
caaccaatggcacagattcaacagtacccaggatcctcaaatcaaatgtcgttcccgatg
cagtcgttcggattctatggccaccaaccacatactcagaatccacaaggacaaatacat
ggaggtggacacccatacttcaatcacggattggctccaatggttgatcagatgactaat
aactactacgacttctcttctcaacagaactatcagcatgattacactatgtacgcgcca
attcagaatcgcacgtcttctaacgagtcttctgaatcctggaacaccaccaccagctca
ttaatgccaacgtcttctgaatctcgtgctccatctgcactcaccgttgatgagttcccg
ggaatcaacgcgggattcgtcttcccaaaatacgagttctaa
DBGET
integrated database retrieval system
