Caenorhabditis briggsae (nematode): CBG_12923
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Entry
CBG_12923 CDS
T01054
Symbol
Cbr-slo-1
Name
(RefSeq) Protein CBR-SLO-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_12923 (Cbr-slo-1)
Ion channels [BR:
cbr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
CBG_12923 (Cbr-slo-1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
Lig_chan
Motif
Other DBs
NCBI-GeneID:
8580490
NCBI-ProteinID:
XP_045095006
WormBase:
CBG12923
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Position
V:18392361..18407424
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AA seq
1165 aa
AA seq
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MSEIYSPSQSKGFNQPYGFPMNCNLSRAFMEMTEEDRKCLEERKYWCFLLSSITTFCASM
ILVVIWRVVTHLCCQRREREFPEPVPPPEVVAINMNGSKHIGGEADPFLKQQQEEKHLGW
MTEAKDWAGELISGQSLTGRFLVLLVFILSIGSLIIYFYDASFQNFQVETCIPWQDSPSQ
QIDLGFNIFFLVYFFIRFIAASDKVWFLLEMYSWIDFFTIPPSFVAIYLQRNWLGFRFLR
ALRLMTVPDILQYLNILKTSSSIRLTQLVTIFVAVCLTGAGLVHLLENSGDFFKGFINPH
RITYADSVYFVLVTMSTVGYGDIYCTTLCGRLFMIFFILFGLAMFASYVPEIADLIGNRQ
KYGGEYKGEHGKKHIVVCGHITYDSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDLELEGL
FKRHFTKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMRVISIKNY
SSDIRVIVQLMQYHNKAYLLNIPSWDWRRGDDVICLAELKLGFIAQSCLAPGFSTMMANL
FAMRSFKTVSYSIFGDFFSPHTPLWLNDYLRGAGMEMYTESLSPAFVNMSFPEAANLLFN
RLGLLLLAIELKDEENKECNIAINPGPNIVIQPQTQGFFIAQSADEVKRAFFWCKQCHDD
IKDVSMIKKCKCKNLALFRRNTKHSTTARDYSDFDALFYQNDARATEVLQQFQPQPPMGG
PMGHLGQQVQLRMINQQSSTSDTHLNTKSLRFAYEIKKLMPSSGGRRNSMSIPPDGRGVD
FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAAMTVLNGHVVVCLFADQDSPLI
GLRNFIMPLRSSNFHYHELKHVVIVGDLEYLRKEWKTLYNLPKISILNGSPLSRADLRAV
NINLCDMCVIISARVPNTEDTTLADKEAILASLNIKAMQFDDTLGFFPMRHQTGDRSPLG
SPISMQKKGAKFGTNVPMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAISVL
DSLMSTTYFNDSALTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDRCRIAQI
SLSDNPYEGVGHNTTYGAMFTIALRRYGQLCIGLYRLHDQDNPDSMKRYVITNPPAELRI
KSTDYVYVLEQFDPGLEYEPGKRQF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatttactcgccgtcgcagtcgaagggattcaatcaaccatatggatttccg
atgaattgtaatcttagccgggcgtttatggaaatgacagaggaggaccggaaatgtctc
gaggaacgcaaatattggtgttttttgttgagcagtataaccacattctgcgcctccatg
atccttgtcgtcatctggcgcgtcgtaacacatttatgctgtcaacggagggagcgagaa
ttcccagagcccgtacctccgccagaagtggtcgcaatcaatatgaatggttcgaagcat
atcggcggagaggccgacccatttttaaaacagcaacaagaggaaaaacatttgggatgg
atgacagaggccaaagactgggctggcgagctgatatccggacaaagtttgacgggacga
tttctcgtcttactcgtcttcatattatcaattggatcgttgataatctatttttatgac
gctagttttcaaaacttccaagtggaaacatgcataccatggcaggacagtccatcgcaa
caaatcgatttgggattcaacatattttttctcgtctattttttcattcgatttattgcc
gcttctgacaaagtttggtttttattggaaatgtacagttggatcgatttttttacgatt
cctccgagttttgtggccatttatttgcagaggaattggttgggattccgtttccttcgt
gcactacgtctgatgaccgtaccagacattcttcaatacttgaacatcttaaagacgtcg
tcctccatccgtctaacccaactagtcaccattttcgtcgccgtctgtctaacgggtgct
ggtctagtacatcttctggaaaattctggagactttttcaaaggattcatcaatccacac
agaatcacttatgcggattcggtgtatttcgtgctggtcacaatgtctacagtaggatat
ggtgatatttattgtacgacgttgtgtggacgattgtttatgattttcttcattcttttc
ggcctggccatgttcgctagctacgttccggaaattgcggatttgattggaaatcgccaa
aaatacggtggcgagtataaaggagagcacggaaagaagcatattgtagtttgtggtcat
atcacctatgactcggtctcccatttccttcaagattttctacacgaagacagagacgac
gtggatgtcgaagtggtgtttttgcatcgagtggtaccggatttggagttggagggactt
tttaaacgacattttacaaaagtggagtttttcactggaactgttatggactcgttggat
ctgagtagggttaagatcggagacgcagacgcttgcctagtccttgccaacaagtacagt
acgaatccagacgccgaggacgctgccaatataatgagagtgatttccattaaaaactat
tcatccgatattcgagtaattgttcaattgatgcaataccataacaaggcctatcttctg
aacatcccttcttgggattggcgacgtggcgatgacgtcatctgtttggcagaattgaag
ttgggattcattgctcagtcttgtctggcgcctggattctcgacaatgatggcgaatttg
tttgcgatgaggagttttaaaacggtaagttattcaatttttggggattttttttccccc
catactcctctctggctcaacgactatcttcgtggtgccggaatggagatgtacactgaa
agtttgagtcctgcatttgtcaatatgtcctttccagaagctgcaaatcttcttttcaac
cgtttgggtcttctgctgctggcaattgaactgaaagacgaggaaaacaaggaatgcaat
attgcaataaatccgggaccaaacattgtaatccaacctcaaactcaaggatttttcatc
gctcagagtgcagatgaagtgaaaagagcatttttctggtgcaaacagtgtcatgatgat
atcaaggacgtttccatgattaagaagtgtaaatgtaaaaacttggctctcttccggcgg
aacacaaaacactcaactacagctcgtgactattcggattttgatgctctattctatcag
aatgacgctagagccacggaagtacttcaacaattccaaccacaaccaccgatgggcggt
ccaatgggacatttaggacagcaggtccaattaagaatgattaatcagcagagttcgacg
agtgatactcacctcaacacgaaatctcttcgatttgcgtatgaaatcaaaaaactcatg
ccatcgtctggaggacgaaggaactcgatgagcataccaccagatgggcggggcgttgat
tttagtaaagatttcgagcagcagttccaagacatgaaatacgacagtactggaatgttt
cattggtgcccgagccggaatctcgaagactgtgtcctcgaaagacatcaagccgcaatg
acagtactcaatggccacgtggttgtctgcttgtttgctgatcaggattctccattaatt
ggattacgaaacttcatcatgccattgagatcgtcgaatttccattatcacgaattgaag
catgttgttattgtgggcgatttggaatacttgagaaaagagtggaaaacgctgtataat
ttgccgaaaatctcaattttgaatggctccccactatctcgagccgatcttcgcgccgtt
aacatcaacctatgcgacatgtgtgttattatctcagcacgtgtcccgaacacagaagac
accacactggcagataaggaggcaattctggcatcgttgaatatcaaagcaatgcaattc
gatgacacattgggattcttcccaatgagacatcaaactggagatcgtagtccattgggt
agtccgatttctatgcagaagaaaggtgcaaagtttggaactaatgtgccaatgattacg
gaattggtaaacgactccaacgtgcaattcctcgaccaggacgacgatgacgatccggat
accgaactctacctcacccaaccgtttgcgtgtggtactgcttttgctatctcggtgctc
gactcgttgatgagtacgacctatttcaacgactcagcgctcaccttgatccgaacccta
gtcaccggtggcgccaccccagaactcgagctgattctagccgaaggggcggggcttcga
ggtggctacagtactccagaaacgctatcgaatcgagatagatgtcgaattgctcaaata
tcgctgagcgacaatccgtacgaaggtgtagggcacaatacaacgtatggcgcaatgttc
acaattgcactcaggaggtatggacagctttgtattggattgtacaggctgcatgatcaa
gacaatcctgattccatgaaacgatatgtgattacgaatccgccggcggagttgaggatt
aagagtacagactatgtctacgtactcgaacaattcgatcccggacttgaatacgagccg
ggaaaacgacaattctag
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