Caenorhabditis briggsae (nematode): CBG_12936
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Entry
CBG_12936 CDS
T01054
Symbol
Cbr-ttx-1
Name
(RefSeq) Protein CBR-TTX-1
KO
K09326
homeobox protein OTX1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_12936 (Cbr-ttx-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
CBG_12936 (Cbr-ttx-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
8580500
NCBI-ProteinID:
XP_002638503
WormBase:
CBG12936
UniProt:
A8XGQ3
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Position
V
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AA seq
367 aa
AA seq
DB search
MSLTTSSTNQDSIVSNIGLIHPQNLSGTAGTGSATGAVMNSQNFATPDDVDTKPLSSMSL
DDSSAVSSGASLASSAYSTPTAVDSASSLYFQLSPAMPYLPNVSTATAAAANMSAYFNRS
AYPTSHLGLPAQVGHSYLPSSMQFIGGSLSDCPSATSMGSMSWNANQPSFSRKQRRERTT
FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQKKTMQPGS
GGSACNSFSSNNSSGGGSGGSTGSEVQPASPATTDNELKFSDTIKEECDEQSNSPSVEDQ
KNGTYSIDPISTTTGATTYNGATSFRPQAQYPYGAYSTDYFQYAQANTNAASAYAIDGKG
MWNFQTS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgacgacgtcttctaccaaccaggattccatcgtctccaatatcggtttgatc
catccccagaatctcagtggaactgctggcaccggatccgcaacaggagcagtcatgaac
agtcagaattttgcaacaccagatgatgtcgacacaaagccattatcctcaatgagcctc
gacgactcatctgcagtgtcttctggagcatcgttggcatcgtccgcctattcaacaccc
accgccgtcgattctgcctcatcattgtactttcagttatcgccagccatgccctatctc
cccaacgtgagcacagcaacagctgccgcagccaatatgagtgcctatttcaaccgatcc
gcctatccgactagccatttgggtcttccagcacaagtcggtcatagctatcttccgtcg
agcatgcaattcatcggaggatccctttccgattgtccatcggccacttcaatgggatcc
atgtcatggaatgcgaatcaaccgagtttctccagaaagcaacgacgagagcggaccacg
ttcaccaggaatcagctggaaattctggagagctattttgtgaaaactcgctatccggac
atttttatgcgggaagatatggcccataaaattcaactacctgagagtcgagtacaagtt
tggttcaagaatcggagagcaaaggcgcgccagcagaagaagaccatgcagccgggaagt
ggaggaagtgcttgtaatagcttctcttcaaacaactcgtctggtggtgggtctggtggc
tcaactgggagcgaggtccaaccagcgtctccagcgaccacggacaacgagctgaaattc
tcagacactataaaagaggaatgtgatgagcaatcgaatagtccatctgtagaggaccag
aaaaatgggacatactcgattgacccgatatccacaaccactggagcaacaacttataat
ggtgccactagttttcggccacaagcccaatatccatatggtgcctactcaacggactat
tttcaatacgcccaggctaacactaatgccgctagtgcctatgctatcgatggaaagggc
atgtggaattttcagacaagctga
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