Caenorhabditis briggsae (nematode): CBG_12954
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Entry
CBG_12954 CDS
T01054
Symbol
Cbr-glr-4
Name
(RefSeq) Protein CBR-GLR-4
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_12954 (Cbr-glr-4)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
Glutamate (ionotropic)
CBG_12954 (Cbr-glr-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Ion_trans_2
PRF
Motif
Other DBs
NCBI-GeneID:
8572032
NCBI-ProteinID:
XP_045095011
WormBase:
CBG12954
LinkDB
All DBs
Position
II:complement(6532413..6542555)
Genome browser
AA seq
1007 aa
AA seq
DB search
MQEKCRLVGFSIRILFLLNTILPGITPDDRFHIENEDISIPGTIANRGSFAYEHLRYAID
RWNTEHGAHTQIKFSIVSPIRYDNNYEERMCEIMQQGIVAVVLSNEENEQDSQLIKSMCH
YFNVSSPTSEPNRIFSIFQIPCLSLQSTSLRDSISDFVTLLGPSRGAGARATSEFLDSMR
WTGFLLAYQHGSDLEDLSPLMQYKQIADTGGRRIHIKVRRLPNNTDDYEPFLKYVKTRLK
QTNIIIHSNNITVLYNLLQQARGLNMAEPPFSYVFTNTDLSLLEDFLNNMYGASFHCNIT
GLQLVKNDPMMKTQLALTSEAVYVVGMAIYRMRELGHAPRQSAVMCDSHDIWSDGRIMNE
GIRKLKLRNQLTGDVQFKSNGERDDIMYHGVGRINSQFVKLGNWSEKRGWNFDSRYANRW
EFDIDPDSEDLEGLHLRVVVYLEEPFVIKTGENKYEGFCIDLLNEMTKVLKFNYTIIEVQ
DGTYGIEDDSGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLART
SEETDKGSLWTFLEPLSLTVWISLLLSYCIVSYSMHILAKFSPYEWYNLERIDERDFENI
KNQKNQFTVLNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFL
TVERMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIPMYERMWSVMESSSPGVFVN
SSREGIARVKSGGYAYMMESSMLEYYLERDCDLQSIGGLLDSKGYGIALPKGSPLRDILS
RTVLQLQERTILEALKNKWWRDRREGPSCGPPPAEKATNSKPQNIFGIFYVLLTGLIVAF
LLACGEYCIESRHEAFRLKLTIVGKVGLLDLILKTKELFQFIDWYRGNSNDTKTRNKMRN
MQLDTAGQEISIGLKILANFSLLPYHHIRSIHAEPPLPPVPTSRPDPTRLSISSPAPTIC
VVSCDDGTPISRDRPPSISRAGLRRLSRMLPATTHEQLSRFRQGSMS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaatgtcgcttagttggattttcaatcagaatcctctttcttctgaacaca
attcttccgggaatcacaccagacgatcggtttcatatagaaaatgaagatattagtatt
ccaggtacaattgcgaatcgaggatcatttgcttacgaacacctgagatatgcaatagac
cgatggaatacagaacatggagcacatacacagatcaaattctcaattgtttcaccaatt
cgatatgacaacaattatgaagagaggatgtgtgaaatcatgcagcaaggtatcgtcgcc
gttgtattatcaaatgaagaaaatgaacaagattctcaactcatcaagtctatgtgccat
tatttcaatgtgagttcacctacatcagaacctaatcgaatcttctcaattttccagatt
ccatgtctatcgcttcaatcaacatctcttcgtgattccatctctgactttgtaaccctt
ctcggaccatcgagaggagcaggagcacgagcaaccagcgaatttctggattctatgaga
tggactggatttcttttggcttatcaacatggatcagatttagaagatctttctccattg
atgcagtataaacagattgcggatactggaggaaggagaattcacattaaagttcggcga
cttccgaataacacagatgactatgaaccgtttttgaaatatgtgaaaaccagactgaaa
caaactaacatcataattcattccaacaatataaccgttctctataatcttctacaacaa
gctcgtgggttgaatatggcagaacctccattttcatacgttttcacgaatacggattta
tctcttttggaagattttctaaacaatatgtatggagcatcgtttcattgcaatattact
ggactgcaattggtaaagaatgacccaatgatgaagactcaattagcgttaacttccgaa
gcggtttatgttgtagggatggcgatttatagaatgagagaactcggtcatgctcctcgt
caatcggctgtgatgtgtgattctcatgacatttggtcggatggtcgaataatgaatgaa
ggaattcgaaagttgaaactacgtaaccaattgaccggagacgtgcaattcaaatcaaat
ggagaacgagacgacatcatgtatcacggcgttggacgcatcaactcacaatttgtgaag
cttggcaactggtctgaaaagcgtggttggaacttcgatagtcgatatgcaaatcgatgg
gaattcgatatcgacccggattcagaagatttggaaggacttcaccttcgtgttgttgtc
tatctagaagaaccgtttgtgatcaagactggagaaaataagtacgaaggattttgcatc
gatttattgaatgaaatgacaaaagtactgaaattcaattatacaatcattgaggttcaa
gatggaacttatggaattgaggacgattctggtagatggaatggtataattggagctcta
caaaggcacgaagcagatttatctctttcagcagtgaccataacttatagcagagccgaa
gtagttgactttactcttccatttatgcatctcgggatttcgattctattagcacgaact
tcggaagaaactgataaaggatcactttggacattccttgaacccctttctctgacagtt
tggatcagtttacttctcagttattgcattgtttcatattcaatgcacattttggcaaag
ttttctccttatgaatggtacaacttggaaaggattgatgaacgggattttgaaaacata
aaaaatcaaaagaaccaattcacagttctgaattcgttctggtttacgatgggatctctt
atgcaacaaggatcggatgtgattccacgagcagctgcgactcgattgattgccgtggtt
tggtggatgttcacacaaattataatctcttcatatacggctcaattggctgcgttcttg
actgtagagagaatgtcaacacctatcgaaagtacacaagatttggcgaatcagcaaaaa
ataagatacggagttctaaaaagcgggtcaactatggacttcttccgtgagagtaaaata
ccaatgtacgagcggatgtggtcagtaatggaatcatcatctcctggagtttttgtaaat
agctcaagagaaggaatagcacgggtaaagtcgggtgggtacgcgtatatgatggagagt
tcgatgttggaatattatttggaacgagattgtgatttacaaagtatcggaggtcttttg
gattcaaagggatatgggattgctctaccaaaaggttctcctcttcgagatattttatca
agaactgtgttacaattacaagaacgaactattttggaagcattgaaaaataaatggtgg
agggataggagagaaggcccttcgtgtggtcctcctcctgctgaaaaagcaacaaattca
aaacctcaaaatatattcggaatattctatgttcttctaactggtctaatagttgcattc
cttcttgcatgcggggaatactgtattgagtctcgacatgaagcgtttcggctgaaactg
acaattgttggaaaagtaggtcttctagatttgattttgaaaaccaaagaactttttcag
ttcatcgactggtatcgtggaaattcgaatgatacgaaaactcgaaataaaatgagaaac
atgcagttggacactgctggacaagagatctcaataggtttgaaaatccttgcaaatttc
tcgcttctcccgtaccatcatattcgatccattcatgccgaacctccgctacccccagtt
ccaacttctcgacctgatccaactcgtctctcgatttcatcaccagcccctaccatttgt
gttgtttcctgtgatgatggcactccgatcagtcgagatagacctccatccatcagtagg
gcaggccttcgaagactgagtcggatgcttccagccacgactcatgaacagttatccaga
ttccgacaaggatcaatgtcataa
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