Caenorhabditis briggsae (nematode): CBG_13026 Help Entry CBG_13026         CDS       T01054                                  Symbol Cbr-rpa-1 Name (RefSeq) Protein CBR-RPA-1   KO K07466   replication factor A1 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03030   DNA replication cbr03420   Nucleotide excision repair cbr03430   Mismatch repair cbr03440   Homologous recombination cbr03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CBG_13026 (Cbr-rpa-1)    03420 Nucleotide excision repair     CBG_13026 (Cbr-rpa-1)    03430 Mismatch repair     CBG_13026 (Cbr-rpa-1)    03440 Homologous recombination     CBG_13026 (Cbr-rpa-1)    03460 Fanconi anemia pathway     CBG_13026 (Cbr-rpa-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cbr03000]     CBG_13026 (Cbr-rpa-1)    03032 DNA replication proteins [BR:cbr03032]     CBG_13026 (Cbr-rpa-1)    03400 DNA repair and recombination proteins [BR:cbr03400]     CBG_13026 (Cbr-rpa-1) Transcription factors [BR:cbr03000]  Eukaryotic type   Zinc finger    Cys2His2 others     CBG_13026 (Cbr-rpa-1) DNA replication proteins [BR:cbr03032]  Eukaryotic type   DNA Replication Elongation Factors    RPA (replication protein A)     CBG_13026 (Cbr-rpa-1) DNA repair and recombination proteins [BR:cbr03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     RPA (replication factor A)      CBG_13026 (Cbr-rpa-1)    MMR (mismatch excision repair)      CBG_13026 (Cbr-rpa-1)   DSBR (double strand breaks repair)    HR (homologous recombination)      CBG_13026 (Cbr-rpa-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rep_fac-A_C REPA_OB_2 tRNA_anti-codon DUF223 OB_MEIOB_N CDC24_OB3 Pox_vIL-18BP DUF5830 IBR MCM10_OB ubiquitin Motif Other DBs NCBI-GeneID:  8572089 NCBI-ProteinID:  XP_002630573 WormBase:  CBG13026 UniProt:  O97472 A0AAE9DJE8 LinkDB All DBs Position II:complement(6275986..6278199) Genome browser AA seq 658 aa AA seqDB search MTSIKISSDVFNKYHTNGKLRLSTGYVQEALEKQGYPGHDGVVQILKGKEDIGEQMGHGF TYRIRICDGIFQYNTLVSADIDDQIKREAEHLVEGAIIAITNLSTFSQGAGIKTSFLITG YTLLSRYHQTLSAPEVKPRSHSGNPAEHHGYRPNIVVEDVWPEAESITSEFQENMSNPPA AKMPKRESGGEASHNRVPAPEPHRSRAPPPPARRGPSNTERGVIPIAMVTPYVNNFRIHG MVSRKEDIKNIPAKNMKIFNFEITDSNGDTIRCTAFNETAESFHSTITENLSYYLSGGSV RQANKKFNNTGHDYEITLRNDSVVEAGGELLAAPKLNLKRVSLAEIAGHCGEMIDVLVIV EKMDAEATEFTSKAGKTLTKREMELIDESQALVRLTLWGDEAIKANVDDYHGKVIAFKGV IPREFNGGYSLGTGSGTRIIPVPEISGVSELYDWYTTEKPHSELKLISQTSGGMSEAPRT IAGLQEMQFGKDSDKGDYASVKAMITRINPNSALYKGCASEGCQKKVIESDGEYRCEKCN KSMNKFKWLYMMQFELSDETGQVYVTAFGDSAAKVVGKTAQEVGDLKDENLNEYNATFER LQFVPKMWRLRCKMETYNEEVRQKMTVFSVEEVNQDKYIENLKELIEQMKGIEDEGSY NT seq 1977 nt NT seq  +upstreamnt  +downstreamnt atgacatcgatcaaaataagttccgacgtcttcaacaaataccacactaacggaaagctt cggctctccacaggttatgtgcaggaagcactggagaagcagggatatcccggtcacgac ggtgttgttcaaattctgaaaggaaaggaagacatcggagagcaaatgggccatggattc acatacagaatccgtatttgtgatggaattttccagtataacactctcgtcagtgcagac attgacgatcagatcaaacgtgaagccgagcatcttgttgaaggagctatcattgctatt acgaatctctctactttcagtcaaggagctggaatcaaaacatctttcttgatcacggga tacactcttctttctcgctatcatcaaacactgagtgctccagaagttaagccaagatcg cattctggaaacccggcagaacatcatggatacagaccaaacattgttgtcgaagacgtc tggccggaagcagaatccatcacatctgagttccaggagaatatgtctaacccgcctgca gcgaaaatgccaaaacgagagagtggcggagaagcatctcacaaccgtgtgccagctcct gaaccacatcgtagccgtgctccacctccaccagctcgccgaggtccttccaacactgag cgtggagtgatccctattgcaatggttactccttacgtcaacaacttccgcatccatgga atggtatcaagaaaagaggatatcaaaaatattccggccaagaacatgaaaatcttcaac tttgaaataactgattcaaacggcgacaccatccgatgtaccgcattcaacgaaactgct gagtctttccacagcacaattacggagaatctttcttattatctttctggaggatctgtt cgtcaggctaacaaaaaattcaacaacactggacatgactacgaaattacactccgcaat gactctgttgttgaagccggaggcgagttgcttgctgcgccgaagttgaatctgaagaga gtttcgttggctgagatcgcaggacattgtggagaaatgatcgatgttcttgtgattgtt gaaaagatggatgctgaagcaacggagttcacttcgaaagccggaaaaactcttaccaag agagagatggagcttatcgatgaatcgcaagctttggttcgattgactctttggggagat gaagcaatcaaagcgaacgttgacgattatcacggcaaagtcatcgctttcaagggagtc ataccgagagagttcaatggcggttactctttgggtactggttctggaacgcgcattatt ccagtcccagaaatctctggagtttctgagctttacgattggtacacaactgagaaacca cattcggaactgaagttgatcagtcaaacctccggagggatgtctgaagctcctcgcact attgctggtcttcaagaaatgcagttcggaaaagactcggataagggagactacgcatct gtgaaagctatgattactagaatcaatccaaacagtgccctctacaaaggatgcgcttcg gagggttgccagaagaaggttatcgaatcagacggtgaataccgttgcgaaaagtgcaac aagagcatgaacaaattcaagtggctctacatgatgcaattcgagctttccgatgagact ggacaagtctatgtgactgctttcggagatagcgctgccaaggtcgttggaaaaactgct caggaggtcggagatctgaaagacgagaaccttaacgagtataatgccactttcgagcgt cttcagtttgttccaaagatgtggcgtcttcgctgcaaaatggagacatacaatgaagaa gtccgtcaaaaaatgaccgtcttcagtgtcgaagaggttaaccaagacaaatacattgaa aatctcaaggaactcattgagcaaatgaagggaatcgaggacgaaggaagctactaa

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