Caenorhabditis briggsae (nematode): CBG_13145
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Entry
CBG_13145 CDS
T01054
Symbol
Cbr-haf-2
Name
(RefSeq) Protein CBR-HAF-2
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
cbr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_13145 (Cbr-haf-2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CBG_13145 (Cbr-haf-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_13145 (Cbr-haf-2)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_13145 (Cbr-haf-2)
Membrane trafficking [BR:
cbr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
CBG_13145 (Cbr-haf-2)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
CBG_13145 (Cbr-haf-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
RsgA_GTPase
nSTAND1
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
8588747
NCBI-ProteinID:
XP_045095073
WormBase:
CBG13145
LinkDB
All DBs
Position
II:complement(6071753..6074400)
Genome browser
AA seq
793 aa
AA seq
DB search
MRRWINTSLYLYMVFDVVLTNLSFGYFSPGWKFDTEAFLNISTFSLPYRFTKTPYEFQIL
MFIRQIICVIAVLLIIFDKKDKTKYLFPVVTFNAVFSYSFSLVKFLAFSEYTEQLYYPGV
YISVGWTILSGFVQGLVWYFVLASHPFDYHRLLNTTANSDDVPAVETATDATTEATSTSS
VENGVFPTNAPRRPLRKVLRQLFSYCGHQWPWFVAGFFFLNIYALARVFIPNYTAQVIAD
IVNQRGFDALFHSILILCALTATSSFFGGLRGGCFDYATALVTLRIRLDLFTSLISQDIA
FFDTSKTGETMSRLTSDCQTISSTVSTNVNVFMRNGVMLVGALVFMFVMSWRLAMVTFIA
VPFVGFITKVYSKFYDKISETLQQTIADANQMAEEVISTMRTVRSFACEKREQKRFENLL
SSTLTVNRKRALAYMGYTWNNEFCDNAILIAVLSYGGHLVLTGKMGKEELITFLLYQMQL
GENLYMLSYVMSGLMEAVGASRKVFDLVDRKPQFELNGRVEPRVNGNITFSNVGFTYPSR
PNNPVLKDLTLNIKAGETVALVGPSGGGKSSIVSLIEHFYEPDNGTITLDDVPIKDINHV
FYHQKVALVAQEPVLYNGSVRHNILYGCDFATEDDMLNASKMANVHDFVMELEKGYDTNC
GEKGVQMSGGQKQRIAIARALVRNPAVLILDEATSALDTESEALVQQALSKCAQERTVII
IAHRLSTIEKANKIAVIVKGHLVQVTKFFVRATHRVVIPEFQMGTHNDLMTDTDGMYYSL
VSRQMLNAKVGDE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgatggataaacacatcattatacctctatatggtatttgatgtggtcctcacg
aacttgtcgtttggctacttctcacccggttggaagttcgacacagaagcatttctgaat
atttcaacattttctctgccatatcgcttcacaaagactccgtatgaattccaaattctc
atgttcatccggcaaatcatatgtgtcatcgctgtgcttcttatcatttttgacaaaaaa
gacaagacaaagtacctgttcccagtcgtcactttcaatgccgtattcagctattcattt
tccctggtgaaattccttgctttctcggaatatacagaacaactttattaccctggagta
tatatttccgttggatggacaattctctctggatttgttcaaggtctcgtgtggtacttc
gttctcgcctctcatccattcgactaccatcgattgctaaatacaacggctaacagtgat
gatgttcctgcagtagaaactgcaactgacgccaccacagaagcaacatctacgagcagc
gttgaaaatggagttttccccacaaacgctcctcgacgtccactccgaaaagttctccgg
cagctgttctcctactgtggacatcaatggccatggtttgttgccggcttctttttcctc
aacatctatgctctagctcgtgtgttcattccaaactataccgcccaagtcattgccgac
atcgtgaaccaacgaggattcgatgcgctcttccattcgatcttgattctgtgtgctctc
acagctactagttctttctttggtggccttcgtggtggatgcttcgattacgccacagct
cttgtcacacttcgaattcgtttggatcttttcacatcgcttatcagtcaagatattgct
ttcttcgacacttccaaaaccggagaaacgatgtctcgactcacctctgattgccaaacg
atttcttccacagtttctacgaacgttaacgttttcatgcgaaacggtgtgatgctcgtt
ggagctctggttttcatgtttgtcatgtcctggcgtcttgcgatggttactttcattgca
gtcccatttgtcgggttcatcaccaaagtttacagcaaattttacgataaaatctcggaa
accttgcaacagacaatcgctgatgcgaaccaaatggctgaagaagtcatttcgacaatg
agaactgtcagaagttttgcttgtgaaaaacgagagcagaagcgatttgagaatcttttg
tcgagcacactgactgtcaaccggaaacgcgctctcgcttacatgggctacacctggaac
aacgaattctgtgataatgccattctgatcgcagtcctctcctatggaggtcatctcgtt
ttgactggaaagatgggaaaggaagaattgattactttccttctttatcaaatgcaactg
ggagaaaacctttatatgctatcgtatgtgatgtctggattgatggaggcagttggagca
tctagaaaggtctttgacttagtggatcgcaaacctcaattcgaattgaatggaagagtc
gaaccacgtgtcaatgggaacatcacattctccaatgtcggattcacatatccatctcgt
cccaacaaccctgtgctcaaggatttaactcttaatatcaaagcaggagaaacggtagct
ctcgtaggcccaagtggtggaggaaaatcttcaatcgtttcgctcatcgaacatttttat
gagcccgacaatggaacgatcacacttgatgatgtaccgattaaggatatcaatcacgtc
ttctatcatcaaaaggtagccctagtagcccaggaacctgttctctataatggatccgtt
cgtcacaacattctctacggttgcgattttgctactgaagatgatatgctgaacgcttct
aagatggctaacgttcatgactttgtgatggagttggagaaaggatatgacactaactgt
ggagagaaaggtgttcaaatgagcggtggacagaagcaacgaatcgctattgcacgtgcg
ctggtgcgcaatccggctgttctcattcttgatgaagccaccagtgcattggacacggag
tctgaagctttagttcagcaagctctcagcaaatgtgctcaagaacgaactgtcatcatt
atcgcccaccgtttgtcgactattgagaaggctaacaaaatcgctgtgatcgtcaaagga
cacctcgttcaggtaaccaaattcttcgttagagcaactcatcgagttgtaattcctgaa
tttcagatgggtacacacaatgatctgatgaccgacactgatggaatgtattattctctt
gtctctcgccaaatgctgaacgccaaagttggagacgaatag
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