KEGG   Caenorhabditis briggsae (nematode): CBG_13184
Entry
CBG_13184         CDS       T01054                                 
Name
(RefSeq) Protein CBG13184
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CBG_13184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbr03032]
    CBG_13184
Enzymes [BR:cbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CBG_13184
DNA replication proteins [BR:cbr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    CBG_13184
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_2 DUF1744
Other DBs
NCBI-GeneID: 8583328
NCBI-ProteinID: XP_045095087
WormBase: CBG13184
LinkDB
Position
III:5823181..5828139
AA seq 1473 aa
MSDSENNETDVRRSSRRCGVSAKTTKMMSEMEKLKQARATGKVYRPDLEVEDVYDTVDDA
EYERIVSKRQNENFVVDDNGMGYADTGADFEDDDYDDYDDEEPRKSSSNKGDKKSKKDKK
DKKEKKKGAMDAYISYTASRKAAVDESKLKATLDEDEDLKNILDQLGDNDSDGEEEITKP
KKVPANPFKRGRSAESPGSDAIMPRPIIKKAKTGANVTGLAPHRFQNNKKTVVRAPEPSD
DDEDYGVPDFNDPILSSPFKEEAVSPVSTSKLSSKTHETELDARKDAVKMEMDEEEEEEQ
KTSGTIREVEDSLAKFRVIEDVWTGNEDQEEEEDGKVEVKTGTEPFYVMTGDREDVKAIR
MYWIDAYEDVHKANGTVYLFGKVKTGANTWETCSIVVKNICRKVYFMPRSENLRTGEESN
LADLHKEIGEVLKNKFNTHEFKCKMVEKELIRDESFGNGGGTKTPLMEVLYPADKGKLPN
DLKGDTFSHTFNTSVSPLERLLIEKKFMGPGWIDLYSYVDPKAKTSNCKYEFEVDMEKMR
NIKYLEGEDLEKLKGTANSAVPSIKLLALNIVTTLNERKENEICMISTLFNSKCDLAHPS
SDNKAFKPRCLVTKPHGGSLPYDIQKRLESEKISKFVKTVPNEKALLTLFLAEINDEEPD
MVVGHDLSAMIALLVSRLEKLKLPNWSRISRLKRSINIGKLGHSKSGQWELTAGRMMLDS
KLAAMELVKSRSFDLTELSQQILGTNRREIYSNEISNLYSDSKDLISLINWSWHDSLLSV
RIVVRLNALPLYMQISQIVGGITSRTMMGGRAERNEYLLLHAFEKADLIAPDKYSAFENK
KQKEQQVKEEGDEKKAGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTT
LVYSKDSDEQLSVPQNTDVEGVLPREIRKLVECRRDVKALMKTERNESKRKQMDIRQMAL
KLTANSMYGCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMIN
TNSMDLAMAKKLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTKVEAK
ELKGLDIVRRDWSQLAKEIGTAVVDKILDSSLSRDEMISSIDDLLRDIRQKLDSGTVPIE
MFQISKQLTKNPDQYGDVKAQSHAAVAQRLNKSGKFHMRHNDIVEYVICEDGTDNGATQR
AYHRTEMVDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAECLGLDSTNYRRAAA
AQANQRAAEEDCTWQQENYELCEGVVVVCPHPECGHSNVIRETFDCVTDPTSPRFLIAGC
SQCNGTWESSEHQAVISNQIDCQLGEFVARHHIAAYKCDEPTCEFKTRVQTMKWCREGLE
CIRCSTGVLRREYTSKQLFDQQMFFRQIFDVDAALRKMSDSQKRAAENRDRQQFNACRID
SMDIVNRINEKYLERNSYNRVDLSYIFAPMMKI
NT seq 4422 nt   +upstreamnt  +downstreamnt
atgtcagactctgaaaataatgagacggatgtgcggcgctcgtctcgtcgctgcggggtg
agtgcgaagaccacgaaaatgatgtctgaaatggagaagctgaaacaagcccgtgctact
ggaaaagtttatagaccagatctagaagttgaggacgtttacgatacagtagatgatgcg
gagtacgagaggatcgtgtccaagagacaaaacgaaaattttgttgtggatgacaatgga
atgggctacgcggacactggtgctgactttgaggacgatgattatgatgactacgacgat
gaagagccaaggaagtcatcgtcaaacaaaggagacaaaaagtccaaaaaggataagaaa
gacaaaaaagaaaagaagaagggagcaatggacgcttacatttcttacactgcaagtcga
aaagcagccgttgatgagtcgaagctgaaagccacgctggatgaggatgaagatctgaaa
aacattcttgatcagctgggagataatgatagtgacggagaggaagaaataacgaaacct
aaaaaggttcccgcgaatccattcaaaagagggagaagtgctgaatcgcccggttccgat
gccatcatgccgcgcccaattattaaaaaagcaaaaacaggcgcaaatgtgacaggattg
gcacctcaccgcttccaaaacaacaagaaaacagtggtaagagctcctgaaccatccgat
gacgacgaggattatggtgtccccgacttcaatgaccccattttgtcttctccctttaaa
gaagaagctgtctctcctgtttctacttctaaactgtcttctaaaacccatgaaactgaa
ttagatgctcggaaggatgctgtgaaaatggaaatggacgaggaagaagaagaagaacag
aaaacttctgggactataagagaagttgaggacagtctggcaaaattccgagtaattgaa
gacgtttggactggaaatgaggatcaagaagaagaggaagatgggaaggttgaggtgaaa
actggaactgagccattctacgtgatgactggagatcgtgaagatgtgaaggcaatcaga
atgtattggatagatgcttacgaggacgtgcacaaggccaatggaactgtgtacttgttc
ggaaaagtgaaaaccggtgcgaacacttgggaaacctgttcaatcgttgttaagaatatc
tgccggaaggtttacttcatgccacgttcagagaatctaagaaccggagaagaatcgaac
ttggcagatctgcacaaagagattggagaagtcttgaagaacaaattcaatacacacgaa
ttcaagtgtaagatggtcgagaaggaattgattcgagatgagagtttcggaaatggagga
ggaacgaagactcccctgatggaagtgctctatccggcagataagggaaaacttccgaac
gatctcaaaggtgacaccttttcacacacattcaacacctccgtctccccacttgaacgt
cttctgatcgagaaaaaattcatgggtcccggatggattgatctctacagttacgtggat
ccaaaggctaagacatcaaactgcaagtatgagtttgaagttgatatggagaagatgaga
aatatcaagtatttggaaggagaggatttggaaaaactgaaaggaacagccaattcagca
gttccctcaatcaaactcctcgcattgaatattgtgacaacactgaacgaaaggaaggaa
aacgaaatttgtatgatttcaacgttgttcaactcgaaatgcgatcttgctcatccgagt
tctgataacaaggctttcaagccgagatgcttggtcacgaaaccacacggtggatctctc
ccatatgacatacagaagcgtctggaatccgaaaaaatctcaaaattcgtgaaaactgtt
cccaacgagaaggcccttctcactcttttccttgctgagatcaatgatgaagaaccggat
atggttgttggacatgacttatcagctatgattgctcttctggtttcgcgtctcgaaaag
ctaaaattacctaactggtcccgcatttcccgtctaaaacgttcgattaacattggaaaa
ctgggtcactcgaaatctggacaatgggagttaacagctggacggatgatgcttgattca
aagttggccgctatggaacttgtcaaatcgagaagtttcgatttaactgagctctctcaa
caaattcttggaactaatcgacgagagatctattccaatgagatttcaaacctctatagt
gactcaaaggatctaatcagtctaatcaattggtcatggcacgatagtcttctctctgtt
cgtatcgtggttcgtctcaatgctcttcctctttacatgcaaatctcgcaaattgtcggt
ggaatcacttcaagaacaatgatgggaggaagagccgaaaggaatgaatatctccttctg
catgcattcgagaaggctgatcttattgcaccggataagtacagtgcttttgagaacaag
aaacaaaaggagcagcaggttaaagaagaaggagacgaaaagaaggctggaaaagcacag
tattctggaggattggttctggaaccgaagaagggactctacgaaacactcatcttgttg
cttgatttcaactccctctacccaagtatcattcaagagtacaatatctgctacaccact
ttggtgtattcgaaggatagtgatgagcaactatctgttccccaaaacacagacgttgaa
ggtgtgcttcctcgtgaaatcagaaagcttgtggagtgtaggcgagatgtaaaagctctg
atgaagacggagagaaatgaatcgaaacggaaacagatggatatcagacaaatggctctc
aaactcactgccaactccatgtatggatgtctcggtttccaatattctcggttctatgcg
aaacctctagctgctctggttactgccaagggaagagaaattctgatgcattcgaaagat
cttgtggagaaaatgggttactctgtagtctacggagatactgattctatcatgatcaac
acgaactcgatggatttggcaatggccaagaagttgggttctgaaatcaagaaggctgtt
aacaaatgccatcggttgctagaacttgatctcgatggagttttcaagagaatgttattg
ctcaaaaagaaaaagtacgccgcgttgacaatcaatccagacacgaaggttgaagcgaag
gagttgaagggactcgatattgtcagaagagattggtctcaattggccaaagaaatcgga
acagcggtcgtcgataaaattctggactcttccctgtctcgagatgagatgatttcttca
attgatgacctcctcagagacatccgccagaagcttgattctggaacagtacctatagaa
atgttccagatcagcaaacagctgactaaaaatccagatcagtatggagacgtgaaggct
caatcgcatgctgcagttgcacagagacttaataaaagtggaaagttccacatgagacac
aatgatatcgttgaatacgtaatctgtgaagatggaactgataatggtgctacacaaaga
gcctatcatcgaactgaaatggttgataacaaggacttgaagattgatcttctctactat
ctcgctcaacagattcatccagttgtttcccgcctcgttgagcccatcgaggagactgat
gcagttcgaattgctgaatgccttggattggattcaacaaattaccgtagagccgcagct
gcacaagctaaccaacgagctgctgaagaggattgcacttggcaacaagagaattacgag
ctgtgcgaaggagtggttgttgtttgcccacacccagaatgcggtcattctaacgtcatt
cgagaaacgtttgattgtgtgaccgatcctacatctcctcgattcttgattgctggatgt
tcgcaatgcaacggaacatgggaatcctcagagcatcaagctgttatctccaatcaaatt
gactgtcaactgggcgagttcgtggccagacatcatattgcagcatacaagtgcgatgaa
ccgacatgtgaattcaaaacgagagtgcagacgatgaaatggtgtcgtgaaggattagaa
tgcattcgttgttcaactggagttctccgtcgcgaatacacatcgaaacaacttttcgat
caacaaatgttctttcgtcagattttcgatgtagacgccgctcttcgtaaaatgagtgat
tcgcagaaaagagccgctgagaatcgtgaccgccagcaattcaacgcctgtcgcatagat
tcgatggatattgtcaatcgaatcaacgaaaaatatctggaacgcaactcctacaaccgt
gtggatctttcgtatatcttcgccccgatgatgaagatttag

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