Caenorhabditis briggsae (nematode): CBG_13184
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Entry
CBG_13184 CDS
T01054
Name
(RefSeq) Protein CBG13184
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG_13184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_13184
Enzymes [BR:
cbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBG_13184
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
CBG_13184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
8583328
NCBI-ProteinID:
XP_045095087
WormBase:
CBG13184
LinkDB
All DBs
Position
III:5823181..5828139
Genome browser
AA seq
1473 aa
AA seq
DB search
MSDSENNETDVRRSSRRCGVSAKTTKMMSEMEKLKQARATGKVYRPDLEVEDVYDTVDDA
EYERIVSKRQNENFVVDDNGMGYADTGADFEDDDYDDYDDEEPRKSSSNKGDKKSKKDKK
DKKEKKKGAMDAYISYTASRKAAVDESKLKATLDEDEDLKNILDQLGDNDSDGEEEITKP
KKVPANPFKRGRSAESPGSDAIMPRPIIKKAKTGANVTGLAPHRFQNNKKTVVRAPEPSD
DDEDYGVPDFNDPILSSPFKEEAVSPVSTSKLSSKTHETELDARKDAVKMEMDEEEEEEQ
KTSGTIREVEDSLAKFRVIEDVWTGNEDQEEEEDGKVEVKTGTEPFYVMTGDREDVKAIR
MYWIDAYEDVHKANGTVYLFGKVKTGANTWETCSIVVKNICRKVYFMPRSENLRTGEESN
LADLHKEIGEVLKNKFNTHEFKCKMVEKELIRDESFGNGGGTKTPLMEVLYPADKGKLPN
DLKGDTFSHTFNTSVSPLERLLIEKKFMGPGWIDLYSYVDPKAKTSNCKYEFEVDMEKMR
NIKYLEGEDLEKLKGTANSAVPSIKLLALNIVTTLNERKENEICMISTLFNSKCDLAHPS
SDNKAFKPRCLVTKPHGGSLPYDIQKRLESEKISKFVKTVPNEKALLTLFLAEINDEEPD
MVVGHDLSAMIALLVSRLEKLKLPNWSRISRLKRSINIGKLGHSKSGQWELTAGRMMLDS
KLAAMELVKSRSFDLTELSQQILGTNRREIYSNEISNLYSDSKDLISLINWSWHDSLLSV
RIVVRLNALPLYMQISQIVGGITSRTMMGGRAERNEYLLLHAFEKADLIAPDKYSAFENK
KQKEQQVKEEGDEKKAGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTT
LVYSKDSDEQLSVPQNTDVEGVLPREIRKLVECRRDVKALMKTERNESKRKQMDIRQMAL
KLTANSMYGCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMIN
TNSMDLAMAKKLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTKVEAK
ELKGLDIVRRDWSQLAKEIGTAVVDKILDSSLSRDEMISSIDDLLRDIRQKLDSGTVPIE
MFQISKQLTKNPDQYGDVKAQSHAAVAQRLNKSGKFHMRHNDIVEYVICEDGTDNGATQR
AYHRTEMVDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAECLGLDSTNYRRAAA
AQANQRAAEEDCTWQQENYELCEGVVVVCPHPECGHSNVIRETFDCVTDPTSPRFLIAGC
SQCNGTWESSEHQAVISNQIDCQLGEFVARHHIAAYKCDEPTCEFKTRVQTMKWCREGLE
CIRCSTGVLRREYTSKQLFDQQMFFRQIFDVDAALRKMSDSQKRAAENRDRQQFNACRID
SMDIVNRINEKYLERNSYNRVDLSYIFAPMMKI
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgaaaataatgagacggatgtgcggcgctcgtctcgtcgctgcggggtg
agtgcgaagaccacgaaaatgatgtctgaaatggagaagctgaaacaagcccgtgctact
ggaaaagtttatagaccagatctagaagttgaggacgtttacgatacagtagatgatgcg
gagtacgagaggatcgtgtccaagagacaaaacgaaaattttgttgtggatgacaatgga
atgggctacgcggacactggtgctgactttgaggacgatgattatgatgactacgacgat
gaagagccaaggaagtcatcgtcaaacaaaggagacaaaaagtccaaaaaggataagaaa
gacaaaaaagaaaagaagaagggagcaatggacgcttacatttcttacactgcaagtcga
aaagcagccgttgatgagtcgaagctgaaagccacgctggatgaggatgaagatctgaaa
aacattcttgatcagctgggagataatgatagtgacggagaggaagaaataacgaaacct
aaaaaggttcccgcgaatccattcaaaagagggagaagtgctgaatcgcccggttccgat
gccatcatgccgcgcccaattattaaaaaagcaaaaacaggcgcaaatgtgacaggattg
gcacctcaccgcttccaaaacaacaagaaaacagtggtaagagctcctgaaccatccgat
gacgacgaggattatggtgtccccgacttcaatgaccccattttgtcttctccctttaaa
gaagaagctgtctctcctgtttctacttctaaactgtcttctaaaacccatgaaactgaa
ttagatgctcggaaggatgctgtgaaaatggaaatggacgaggaagaagaagaagaacag
aaaacttctgggactataagagaagttgaggacagtctggcaaaattccgagtaattgaa
gacgtttggactggaaatgaggatcaagaagaagaggaagatgggaaggttgaggtgaaa
actggaactgagccattctacgtgatgactggagatcgtgaagatgtgaaggcaatcaga
atgtattggatagatgcttacgaggacgtgcacaaggccaatggaactgtgtacttgttc
ggaaaagtgaaaaccggtgcgaacacttgggaaacctgttcaatcgttgttaagaatatc
tgccggaaggtttacttcatgccacgttcagagaatctaagaaccggagaagaatcgaac
ttggcagatctgcacaaagagattggagaagtcttgaagaacaaattcaatacacacgaa
ttcaagtgtaagatggtcgagaaggaattgattcgagatgagagtttcggaaatggagga
ggaacgaagactcccctgatggaagtgctctatccggcagataagggaaaacttccgaac
gatctcaaaggtgacaccttttcacacacattcaacacctccgtctccccacttgaacgt
cttctgatcgagaaaaaattcatgggtcccggatggattgatctctacagttacgtggat
ccaaaggctaagacatcaaactgcaagtatgagtttgaagttgatatggagaagatgaga
aatatcaagtatttggaaggagaggatttggaaaaactgaaaggaacagccaattcagca
gttccctcaatcaaactcctcgcattgaatattgtgacaacactgaacgaaaggaaggaa
aacgaaatttgtatgatttcaacgttgttcaactcgaaatgcgatcttgctcatccgagt
tctgataacaaggctttcaagccgagatgcttggtcacgaaaccacacggtggatctctc
ccatatgacatacagaagcgtctggaatccgaaaaaatctcaaaattcgtgaaaactgtt
cccaacgagaaggcccttctcactcttttccttgctgagatcaatgatgaagaaccggat
atggttgttggacatgacttatcagctatgattgctcttctggtttcgcgtctcgaaaag
ctaaaattacctaactggtcccgcatttcccgtctaaaacgttcgattaacattggaaaa
ctgggtcactcgaaatctggacaatgggagttaacagctggacggatgatgcttgattca
aagttggccgctatggaacttgtcaaatcgagaagtttcgatttaactgagctctctcaa
caaattcttggaactaatcgacgagagatctattccaatgagatttcaaacctctatagt
gactcaaaggatctaatcagtctaatcaattggtcatggcacgatagtcttctctctgtt
cgtatcgtggttcgtctcaatgctcttcctctttacatgcaaatctcgcaaattgtcggt
ggaatcacttcaagaacaatgatgggaggaagagccgaaaggaatgaatatctccttctg
catgcattcgagaaggctgatcttattgcaccggataagtacagtgcttttgagaacaag
aaacaaaaggagcagcaggttaaagaagaaggagacgaaaagaaggctggaaaagcacag
tattctggaggattggttctggaaccgaagaagggactctacgaaacactcatcttgttg
cttgatttcaactccctctacccaagtatcattcaagagtacaatatctgctacaccact
ttggtgtattcgaaggatagtgatgagcaactatctgttccccaaaacacagacgttgaa
ggtgtgcttcctcgtgaaatcagaaagcttgtggagtgtaggcgagatgtaaaagctctg
atgaagacggagagaaatgaatcgaaacggaaacagatggatatcagacaaatggctctc
aaactcactgccaactccatgtatggatgtctcggtttccaatattctcggttctatgcg
aaacctctagctgctctggttactgccaagggaagagaaattctgatgcattcgaaagat
cttgtggagaaaatgggttactctgtagtctacggagatactgattctatcatgatcaac
acgaactcgatggatttggcaatggccaagaagttgggttctgaaatcaagaaggctgtt
aacaaatgccatcggttgctagaacttgatctcgatggagttttcaagagaatgttattg
ctcaaaaagaaaaagtacgccgcgttgacaatcaatccagacacgaaggttgaagcgaag
gagttgaagggactcgatattgtcagaagagattggtctcaattggccaaagaaatcgga
acagcggtcgtcgataaaattctggactcttccctgtctcgagatgagatgatttcttca
attgatgacctcctcagagacatccgccagaagcttgattctggaacagtacctatagaa
atgttccagatcagcaaacagctgactaaaaatccagatcagtatggagacgtgaaggct
caatcgcatgctgcagttgcacagagacttaataaaagtggaaagttccacatgagacac
aatgatatcgttgaatacgtaatctgtgaagatggaactgataatggtgctacacaaaga
gcctatcatcgaactgaaatggttgataacaaggacttgaagattgatcttctctactat
ctcgctcaacagattcatccagttgtttcccgcctcgttgagcccatcgaggagactgat
gcagttcgaattgctgaatgccttggattggattcaacaaattaccgtagagccgcagct
gcacaagctaaccaacgagctgctgaagaggattgcacttggcaacaagagaattacgag
ctgtgcgaaggagtggttgttgtttgcccacacccagaatgcggtcattctaacgtcatt
cgagaaacgtttgattgtgtgaccgatcctacatctcctcgattcttgattgctggatgt
tcgcaatgcaacggaacatgggaatcctcagagcatcaagctgttatctccaatcaaatt
gactgtcaactgggcgagttcgtggccagacatcatattgcagcatacaagtgcgatgaa
ccgacatgtgaattcaaaacgagagtgcagacgatgaaatggtgtcgtgaaggattagaa
tgcattcgttgttcaactggagttctccgtcgcgaatacacatcgaaacaacttttcgat
caacaaatgttctttcgtcagattttcgatgtagacgccgctcttcgtaaaatgagtgat
tcgcagaaaagagccgctgagaatcgtgaccgccagcaattcaacgcctgtcgcatagat
tcgatggatattgtcaatcgaatcaacgaaaaatatctggaacgcaactcctacaaccgt
gtggatctttcgtatatcttcgccccgatgatgaagatttag
DBGET
integrated database retrieval system