KEGG   Caenorhabditis briggsae (nematode): CBG_13313
Entry
CBG_13313         CDS       T01054                                 
Symbol
Cbr-npp-16
Name
(RefSeq) Protein CBR-NPP-16
  KO
K14295  nuclear pore complex protein Nup50
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_13313 (Cbr-npp-16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_13313 (Cbr-npp-16)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CBG_13313 (Cbr-npp-16)
SSDB
Motif
Pfam: Nucleoporin_FG Ran_BP1 RES
Other DBs
NCBI-GeneID: 8583436
NCBI-ProteinID: XP_045095119
WormBase: CBG13313
LinkDB
Position
III:<6351032..>6352890
AA seq 571 aa
MTTAMEVPEAPLTSEQQMNVFRLRDKMTLLNAEFLKVLNGFFTEKSHYDFVSVTTFLTPS
EVRFQSVTMESYMKHVKELKTMYKVDDDAVAAVNSGRTDVRKTEVKRDDAGEKPHQRKIA
KAVRRNGNAGSAVRSTDSPKISNTTVFAASSPAAALSAPKFGDISVIAKDTPAPLSKSSE
PPAPAAGTARKRAIRGGGPLGGSESIIFKSGNESQASTSTVTIPTTNIKFPEPSKDFWTK
KDSSNTDGAALGNNDGSLFAFLGKDGDKSKEPSKFTGFSFGKKPESDTAKPDEPKTTVPL
FGSTTSAETTVPLFGSTTSKNENVKTTGSLFGAISKSPETTSAGLKSSDTPATTSKPLVF
GEQKDGDNAAAKPFSGLAFGASLFGSGAKQTTPSLSFGSGGTNTGSGGTTTTGSLFGGAT
TTGSLFGGFAGLAQKAQENQAKGEGGDDDEEYVPPKVETVEVEEPDAVISSKVAVFKFAD
KEYTKLGVGMLHVKDTDGKFSVLIRAATAIGTVWLNALCNKAMKATKVDDKGERIRLTCP
VSASEMTTLMIRFGSADVAKKFVEKVEEVSK
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgactactgcgatggaggttccagaggcaccgctcacttctgagcaacaaatgaacgtt
ttccgtcttcgtgataaaatgacgcttctgaatgcagagtttctcaaagttctcaatgga
ttcttcacagagaaaagccattatgattttgtaagcgttactacatttttgactccttct
gaagttcgttttcagagcgtaacgatggagtcatacatgaaacatgtgaaagaattgaaa
acaatgtacaaggttgacgatgatgcagtcgctgctgttaattcaggaagaacagatgtg
cgaaaaactgaagtgaaacgggacgatgctggagaaaaacctcaccagcgcaaaatagct
aaagctgtgcgtcgtaatggaaacgcgggaagtgctgttcgttctactgattcgccaaaa
atttcaaacaccacggttttcgcggcttcaagcccggcagctgcactgtccgcaccaaaa
tttggcgatatttccgtcatcgccaaggatacaccagcgcctctttcaaaatccagtgag
ccacctgcacctgctgctggaaccgctcgcaaacgtgcaattcgtggtggaggaccgctc
ggtggatctgaatccattattttcaagtcaggcaatgagtctcaggcttcaacttccact
gttacaatcccaacaactaacatcaagttcccagaacccagtaaagatttctggacaaaa
aaagattcgagcaacaccgatggagcagctttaggaaataatgatggatctctttttgct
ttcctgggcaaagacggtgataagtctaaagagccttcgaagttcactggattctcattt
ggcaaaaagccagaatccgacactgcaaagcctgatgagccaaaaaccactgtcccactg
tttggatctacaacatccgctgaaactactgtcccactatttggatctacaacatccaag
aatgagaacgttaagacaactggttcactttttggagctatttccaagtcaccagaaacc
acatctgcgggattgaagtcctcagatacgccagctactacttctaagccattggttttc
ggagagcaaaaagacggggacaatgccgcagcgaaaccattctctggacttgctttcggt
gcttctcttttcggatccggcgctaaacaaaccacgccatctttaagcttcggttctgga
ggtactaatactggatctggaggtaccacgactactggatcactgtttggaggtgctacc
actactggatcgttgtttggaggcttcgctggtttagcacagaaagcccaggagaatcag
gcgaaaggcgagggcggtgatgatgacgaagagtatgtgccgccgaaagtagaaacagtc
gaagttgaagagcctgatgcggtaatcagcagcaaagtcgctgtcttcaaatttgctgac
aaggaatacactaagcttggcgttggaatgcttcatgtcaaagacactgatgggaagttt
agtgtactcatcagagctgcgacggcgatcggcaccgtttggctgaacgctctttgtaac
aaggcaatgaaagcaacgaaggtcgatgataaaggagaacgaattcgtctcacttgtccg
gtttcggcatctgaaatgaccacactgatgattcgattcggctctgcagatgtcgctaag
aagttcgtggagaaggttgaagaagtctctaagtag

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