KEGG   Caenorhabditis briggsae (nematode): CBG_13315
Entry
CBG_13315         CDS       T01054                                 
Name
(RefSeq) Protein CBG13315
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBG_13315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_13315
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CBG_13315
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CBG_13315
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 8583438
NCBI-ProteinID: XP_045095120
WormBase: CBG13315
LinkDB
Position
III:complement(<6354264..>6355303)
AA seq 315 aa
MASSSSGPPDIKIHNVFLSNVEEEFARIRGLVEDYPYVAMDTEFPGVVATPLGTFRSKED
FNYQQVFCNVNMLKLIQVGFAMVNDKGELPPTGDVWQFNFNFSFAEDMFSHDSVEMLRQA
GIDFNALQARYISFYKLPESFFQHEGIPTHVFGELLTTSGLITDPRITWLTFSSGYDFGY
LLKSITLGDLPKEEAMFFTCHKTLFPTSFDIKILLRTPNCASAKLKGGLQEVADQLDVKR
QGVRHQAGSDALLTAATFFKIKKQFFGDSWNQIAPLICGHMFGLGSSLSLFHSGGSQARL
GEDPNQGMGGIQQQA
NT seq 948 nt   +upstreamnt  +downstreamnt
atggcatctagtagcagtggtcccccagatatcaaaatccataatgttttcttatcaaat
gtggaagaagagttcgctcgaatccgtggattagttgaggattatccatatgtggccatg
gacacagagtttccgggagtggttgcgacgccattgggaacgttccgaagcaaagaagat
tttaattatcagcaagtgttctgtaatgtcaacatgctgaaattaatacaggttggattt
gccatggtcaacgacaaaggcgagctgcccccaacgggcgatgtttggcagttcaatttc
aatttctccttcgccgaagacatgttttcacatgacagtgttgaaatgctgcgtcaagcg
ggtattgatttcaacgcattgcaggcaagatacatttctttttataagttacccgaaagc
ttctttcagcatgagggaataccaacacatgtattcggcgagttgctgacaacatctgga
ctaattacggatccgcggattacatggctgacattctcctcgggctacgactttggatac
cttctgaaaagtataacgcttggcgatctgcccaaagaagaagctatgttcttcacatgt
cacaaaactctgttcccgaccagtttcgacatcaaaattcttctccgaacgccgaattgc
gcatcagcgaagctgaaaggtggtctgcaggaggttgctgaccagttggatgtaaaacga
caaggagttcgtcatcaggcaggatccgatgcacttttgacggctgcaacgtttttcaaa
atcaagaagcagtttttcggagatagctggaatcaaattgctcctctgatttgcggtcac
atgtttggacttggatcgtcactttccctcttccattccggtggttcacaagcccgactt
ggagaggatcccaatcaaggaatgggtggaattcagcaacaagcgtaa

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