KEGG   Caenorhabditis briggsae (nematode): CBG_13326
Entry
CBG_13326         CDS       T01054                                 
Symbol
Cbr-top-3
Name
(RefSeq) Protein CBR-TOP-3
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03440  Homologous recombination
cbr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CBG_13326 (Cbr-top-3)
   03460 Fanconi anemia pathway
    CBG_13326 (Cbr-top-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbr03032]
    CBG_13326 (Cbr-top-3)
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_13326 (Cbr-top-3)
Enzymes [BR:cbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CBG_13326 (Cbr-top-3)
DNA replication proteins [BR:cbr03032]
 Eukaryotic type
  DNA Topoisomerases
   CBG_13326 (Cbr-top-3)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     CBG_13326 (Cbr-top-3)
   FA (Fanconi anemia) pathway
     CBG_13326 (Cbr-top-3)
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_GRF Toprim HR1
Other DBs
NCBI-GeneID: 8583448
NCBI-ProteinID: XP_045095124
WormBase: CBG13326
LinkDB
Position
III:complement(6383218..6387068)
AA seq 774 aa
MKRALFVAEKNDVAKGVAAILSNGTSNRKEGKSKFNKIYTLNSELFGQVNTVLIPFFQRL
FQRAAISVTSVSGHLMNWQFHENMSNWQTTSMVELFEAPVRHVVTPDMKLIEKTLREEAQ
RHDVLVVWTDCDREGEAIGAEIVKVCRESNRRIDIYRARFSEITKAAITRAARNLIRLDE
KIVAAVDCRSELDLRIGSAFTRLQTLHLRNRFSSLLGQSDSSKVISYGSCQFPTLGFVTD
RYKLIENFISEPFWKLAVEHTREGHKVEFLWDRNRLFDRDVVDILHDECKEAKEAHVEKV
TKKPKSKWRPQALDTVELEKLGISKLRMSAKQTMQVAEKLYSKGFISYPRTETNKFPPGL
NLTPLVEQQVQSTTWGDFATEVLQKGVTPRNGHKSDEAHPPIHPLTFADKNTLHGDDWKV
YELVVRHFLACVSQDAQGEETMVNLRVGSEKFHSSGLRIRDMGYLKVYVYEKWGNRLLPT
YNQGERFSDYKLKIGDGKTQPPDLLTEADLIALMDKFGIGTDATHAEHIEKIKTREYIGV
KPDGKLIPSFLGLALVDGYDDMGFAMSKPDLRANLEMGLKDICDGRRQKQEVLDEQIGKY
KSIFVESERNIEVLSQSLQRYLNKNQQAGGGGGGGGGPPRGPGGGGGGGGSRGSGPPKPP
PKPRGRQSKKSKSPAKNDDAGEDNDTIVTLSEVLGSLTNPKPRKPRAPRKSAPAQADGPN
GLENEEEEVMCTCPEPMKAVVKVVQKEGPNKGKKFYTCSLPYTSSDKCNFFKWV
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgaaaagagcactttttgtggctgaaaagaatgatgtggcgaaaggagttgcggcgatt
ctctcgaatggaacatcgaatcgaaaagaaggaaaaagcaagttcaacaagatttataca
ctcaatagcgaacttttcggacaggttaatacagttttgattccattttttcaacgtctt
tttcagagagcagccatttcagtaactagcgtctctggacatttgatgaattggcagttc
catgagaatatgtcaaactggcagacgacttcaatggtcgaactttttgaagctcccgtt
cgacatgtagttacaccggatatgaaattgattgagaaaacattgagagaggaagcacaa
cgacacgatgtacttgtagtgtggactgattgtgatagggaaggagaagcgattggagcg
gaaatcgtcaaagtttgcagagaaagtaatcgacgaatagacatttatagagcaagattc
tctgaaattacaaaagccgcaatcacgcgagctgctcggaatctgattcgactggatgaa
aaaattgtggctgctgtagattgtcgaagcgaactggatttgagaatcggctcagctttc
acacggttacaaacacttcatttaagaaatcgtttcagtagtctgttgggacaaagtgat
agctcaaaagtgatcagctacggatcttgtcaattcccaacacttggatttgtgacggat
cgttataaactgatcgagaatttcatctccgaaccattttggaagttggctgtggagcat
acacgagaaggacataaagtggaatttctgtgggatcgtaaccgactttttgatcgggac
gtggttgatattcttcatgatgaatgcaaagaagcaaaagaagcacacgtggagaaagtg
acaaagaagccgaaaagcaaatggagacctcaagcattggatactgtagagttggaaaag
ttgggaatttcaaaactgagaatgtcagccaagcaaacgatgcaagtggctgagaagttg
tacagtaaaggattcatttcttatccgagaacggagacaaacaaattcccgcctggattg
aatttgactccgttagttgaacaacaagttcaatcaactacttggggtgattttgcaaca
gaagtcctccaaaaaggcgtaactcctagaaatggacacaaaagtgacgaagcccatcca
ccgattcatccactcactttcgcagacaaaaacactcttcatggagacgactggaaggtc
tatgaactagtcgtccgtcattttctcgcttgtgtttcccaagatgcacaaggcgaagaa
acaatggtaaacctgagggttggatcggagaagttccattcgtcaggtcttcgaatcagg
gatatgggatatttgaaagtttatgtatatgaaaaatggggaaaccgtttgctgccaaca
tacaatcaaggagaaaggttcagcgactacaaattgaaaattggtgatggaaaaactcaa
cctccggatttgcttactgaagctgatctgattgctctcatggataagttcggtatcggt
acagatgcaacacacgctgaacacattgagaaaatcaaaactcgagaatacatcggtgtg
aaaccagatggaaaactcattccatcgttcctaggacttgctctagtcgatggatacgat
gatatgggatttgcaatgagcaaaccagatctaagagcgaatttagaaatgggtctaaag
gatatttgtgatggcagaagacagaaacaggaggttctcgatgaacagattggaaaatat
aaatcgatttttgtggagtctgagagaaatatcgaagttttatcccaaagtttgcaacgg
tatttgaacaaaaaccaacaagctggaggtggcggaggcggaggaggtggaccaccaaga
ggccctggaggtggtggtggtgggggaggttcgagaggatcaggaccaccgaaaccacca
ccaaaaccacgtggaagacaatctaaaaaatcaaaaagcccagcaaagaacgacgacgcg
ggagaagataatgatacgattgtcactctcagcgaagtattgggcagtcttacgaatcca
aaacctcgaaaacctcgtgctccgagaaaaagtgctcctgctcaagcagatgggccaaat
gggttggaaaatgaagaggaagaagtgatgtgtacctgtccagagccaatgaaggccgtt
gttaaagtcgttcaaaaagaaggaccgaataagggaaagaagttttacacatgctctcta
ccgtacacctcgtcagataaatgcaatttctttaaatgggtttaa

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