Caenorhabditis briggsae (nematode): CBG_13326
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Entry
CBG_13326 CDS
T01054
Symbol
Cbr-top-3
Name
(RefSeq) Protein CBR-TOP-3
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03440
Homologous recombination
cbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBG_13326 (Cbr-top-3)
03460 Fanconi anemia pathway
CBG_13326 (Cbr-top-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_13326 (Cbr-top-3)
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_13326 (Cbr-top-3)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBG_13326 (Cbr-top-3)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Topoisomerases
CBG_13326 (Cbr-top-3)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CBG_13326 (Cbr-top-3)
FA (Fanconi anemia) pathway
CBG_13326 (Cbr-top-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
HR1
Motif
Other DBs
NCBI-GeneID:
8583448
NCBI-ProteinID:
XP_045095124
WormBase:
CBG13326
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Position
III:complement(6383218..6387068)
Genome browser
AA seq
774 aa
AA seq
DB search
MKRALFVAEKNDVAKGVAAILSNGTSNRKEGKSKFNKIYTLNSELFGQVNTVLIPFFQRL
FQRAAISVTSVSGHLMNWQFHENMSNWQTTSMVELFEAPVRHVVTPDMKLIEKTLREEAQ
RHDVLVVWTDCDREGEAIGAEIVKVCRESNRRIDIYRARFSEITKAAITRAARNLIRLDE
KIVAAVDCRSELDLRIGSAFTRLQTLHLRNRFSSLLGQSDSSKVISYGSCQFPTLGFVTD
RYKLIENFISEPFWKLAVEHTREGHKVEFLWDRNRLFDRDVVDILHDECKEAKEAHVEKV
TKKPKSKWRPQALDTVELEKLGISKLRMSAKQTMQVAEKLYSKGFISYPRTETNKFPPGL
NLTPLVEQQVQSTTWGDFATEVLQKGVTPRNGHKSDEAHPPIHPLTFADKNTLHGDDWKV
YELVVRHFLACVSQDAQGEETMVNLRVGSEKFHSSGLRIRDMGYLKVYVYEKWGNRLLPT
YNQGERFSDYKLKIGDGKTQPPDLLTEADLIALMDKFGIGTDATHAEHIEKIKTREYIGV
KPDGKLIPSFLGLALVDGYDDMGFAMSKPDLRANLEMGLKDICDGRRQKQEVLDEQIGKY
KSIFVESERNIEVLSQSLQRYLNKNQQAGGGGGGGGGPPRGPGGGGGGGGSRGSGPPKPP
PKPRGRQSKKSKSPAKNDDAGEDNDTIVTLSEVLGSLTNPKPRKPRAPRKSAPAQADGPN
GLENEEEEVMCTCPEPMKAVVKVVQKEGPNKGKKFYTCSLPYTSSDKCNFFKWV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagcactttttgtggctgaaaagaatgatgtggcgaaaggagttgcggcgatt
ctctcgaatggaacatcgaatcgaaaagaaggaaaaagcaagttcaacaagatttataca
ctcaatagcgaacttttcggacaggttaatacagttttgattccattttttcaacgtctt
tttcagagagcagccatttcagtaactagcgtctctggacatttgatgaattggcagttc
catgagaatatgtcaaactggcagacgacttcaatggtcgaactttttgaagctcccgtt
cgacatgtagttacaccggatatgaaattgattgagaaaacattgagagaggaagcacaa
cgacacgatgtacttgtagtgtggactgattgtgatagggaaggagaagcgattggagcg
gaaatcgtcaaagtttgcagagaaagtaatcgacgaatagacatttatagagcaagattc
tctgaaattacaaaagccgcaatcacgcgagctgctcggaatctgattcgactggatgaa
aaaattgtggctgctgtagattgtcgaagcgaactggatttgagaatcggctcagctttc
acacggttacaaacacttcatttaagaaatcgtttcagtagtctgttgggacaaagtgat
agctcaaaagtgatcagctacggatcttgtcaattcccaacacttggatttgtgacggat
cgttataaactgatcgagaatttcatctccgaaccattttggaagttggctgtggagcat
acacgagaaggacataaagtggaatttctgtgggatcgtaaccgactttttgatcgggac
gtggttgatattcttcatgatgaatgcaaagaagcaaaagaagcacacgtggagaaagtg
acaaagaagccgaaaagcaaatggagacctcaagcattggatactgtagagttggaaaag
ttgggaatttcaaaactgagaatgtcagccaagcaaacgatgcaagtggctgagaagttg
tacagtaaaggattcatttcttatccgagaacggagacaaacaaattcccgcctggattg
aatttgactccgttagttgaacaacaagttcaatcaactacttggggtgattttgcaaca
gaagtcctccaaaaaggcgtaactcctagaaatggacacaaaagtgacgaagcccatcca
ccgattcatccactcactttcgcagacaaaaacactcttcatggagacgactggaaggtc
tatgaactagtcgtccgtcattttctcgcttgtgtttcccaagatgcacaaggcgaagaa
acaatggtaaacctgagggttggatcggagaagttccattcgtcaggtcttcgaatcagg
gatatgggatatttgaaagtttatgtatatgaaaaatggggaaaccgtttgctgccaaca
tacaatcaaggagaaaggttcagcgactacaaattgaaaattggtgatggaaaaactcaa
cctccggatttgcttactgaagctgatctgattgctctcatggataagttcggtatcggt
acagatgcaacacacgctgaacacattgagaaaatcaaaactcgagaatacatcggtgtg
aaaccagatggaaaactcattccatcgttcctaggacttgctctagtcgatggatacgat
gatatgggatttgcaatgagcaaaccagatctaagagcgaatttagaaatgggtctaaag
gatatttgtgatggcagaagacagaaacaggaggttctcgatgaacagattggaaaatat
aaatcgatttttgtggagtctgagagaaatatcgaagttttatcccaaagtttgcaacgg
tatttgaacaaaaaccaacaagctggaggtggcggaggcggaggaggtggaccaccaaga
ggccctggaggtggtggtggtgggggaggttcgagaggatcaggaccaccgaaaccacca
ccaaaaccacgtggaagacaatctaaaaaatcaaaaagcccagcaaagaacgacgacgcg
ggagaagataatgatacgattgtcactctcagcgaagtattgggcagtcttacgaatcca
aaacctcgaaaacctcgtgctccgagaaaaagtgctcctgctcaagcagatgggccaaat
gggttggaaaatgaagaggaagaagtgatgtgtacctgtccagagccaatgaaggccgtt
gttaaagtcgttcaaaaagaaggaccgaataagggaaagaagttttacacatgctctcta
ccgtacacctcgtcagataaatgcaatttctttaaatgggtttaa
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