Caenorhabditis briggsae (nematode): CBG_13340
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Entry
CBG_13340 CDS
T01054
Symbol
Cbr-ufd-2
Name
(RefSeq) Protein CBR-UFD-2
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04120
Ubiquitin mediated proteolysis
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_13340 (Cbr-ufd-2)
04120 Ubiquitin mediated proteolysis
CBG_13340 (Cbr-ufd-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_13340 (Cbr-ufd-2)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CBG_13340 (Cbr-ufd-2)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
U-box type E3
CBG_13340 (Cbr-ufd-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Nuf2_DHR10-like
Med9
DUF5333
PilJ
DUF6800
Motif
Other DBs
NCBI-GeneID:
8573271
NCBI-ProteinID:
XP_045095175
LinkDB
All DBs
Position
II:3286294..3289498
Genome browser
AA seq
1035 aa
AA seq
DB search
MFSEAVNLSMIEEKTSLEMDTNDVMMVRVFNHSVNILTPILQTDVTDEGARDFLTSLFEC
ENGPDVRFADAILDVQKLILDVPSRSLQSHIGEIFTKFVLLSPEGTKSTATGRSYNFIDP
SDIVGCREEDAIEFLLFTFVRCHHELQKNNSSSSTKKIIEAAQKALLAVFISVQRGYFDE
QLSYQKACLVFVKRLLEDTVSNSFISVLIEHAANPEESDSDTLHDVFNPIFDVLRSGASC
QNFEENRDETMQQILRVMNVLLNVRIGGNGPRVLCDLLVNRPDFLPSLMEKMIGREFGLT
CYLGPFFNYGLESSPRRVNSRVFINSEDDARKADGSVNMEQTQYINRMSAIRSGLHQMMY
PLLVDQSTRNKTLQWIAKVLICNDQRTRSHYDPADVLCDHFFVNFLSVLYRFSEKIDISK
IIKDYPFLSDSLIDISKETRLKMDEATAMEFVSQFNDRRADYHFSTVCFFLTISTQHLVL
PPLMGRISDYSRHLKELKHKLASLKQKLESAQGFERHEIETKIQQQEQHWKMMSRHLLCL
KTHAQDPALMASALDFGNKQMQFVMSSLCDNLNLLGDDSQLPAEPTPMFCALPQHYLEDV
LDFYIFAITNGQKLLMESSTEWIRRLTVLYTHYQYVKSPFLVAKLVRVLTAIQNPLWQNV
VSLQMARDSLLLCMIKFYSDFEDSGDFYEKFNVRGNIQHMLEKMRDDMFYKAKFMEMARD
CGSEFVRFVNMVINDATWCIDESLSGLKSIHDVEKKMANKAEWEATDQETRNQDLGVLDE
AKRKVSGWLGTAKSNLGLLLSITDNSPEPFRTPALGERLAAMLNHNLSQLMGNKCAELKV
SNPSSYGWQPREFVTLLISIYLGLNVPAFVKYIAYDEVSVFGVLEKLKTVFSKNRCLTIM
LLQIPFFQRTYSPEFFNNAIERMKKNQILGFSQLERFQHLAEDVQKEYEAKAELEDEYDD
VPEEFKDPIMDAIMVDPVTLPSKHIMDRSVIERHLLSTPNNPFNREALTTAELVPNDELK
ARIQAWIIQKRNAKK
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagaggcggtgaacctttcgatgatcgaagagaagacctctcttgagatggac
accaatgatgtgatgatggtaagggtttttaatcattctgtaaatattttgaccccaatt
ttgcagacagacgttactgatgaaggtgctcgagactttcttacaagtctatttgagtgt
gagaacggaccagatgtgcgattcgccgacgccatattagatgttcaaaagttgatctta
gatgttccttcacgatcgctgcagtcgcatatcggagagattttcacaaaattcgtgtta
ttgtcgccagaaggaacgaaatcgacagcaaccgggcgatcatacaacttcatcgacccc
agtgacatagtcggatgccgggaggaagatgctattgaatttttgctttttacatttgtc
aggtgtcatcatgaacttcagaagaataactcgtcatcatccacgaagaaaatcattgaa
gccgctcaaaaagcacttctcgctgtcttcatttctgttcaaagaggctatttcgacgag
caactcagttaccaaaaagcctgtttagtatttgtcaaacgccttctggaggataccgta
tccaacagcttcatcagcgttcttatagaacatgctgcaaatccagaggaatctgattca
gacacccttcacgacgtcttcaatccgatcttcgatgttttgagaagtggagccagttgt
cagaactttgaagagaatcgcgacgagacgatgcagcagattttgcgtgttatgaatgtg
ctgttgaatgtgagaatcggtggaaatgggccacgagtactatgtgatcttctggtgaat
cgccccgattttcttccatcccttatggagaaaatgataggcagggagtttggtctgact
tgttaccttggcccatttttcaactacggactcgaatcctctcctcgtcgtgtcaacagc
cgagtatttattaattctgaagacgacgctcgaaaagcagacggatctgtcaatatggag
caaacacaatacatcaatagaatgagtgcgattcgatcgggccttcatcaaatgatgtat
ccattgcttgtcgatcaatccactcgtaacaagacgctccaatggattgcaaaagtttta
atctgtaacgatcaaagaactcgaagccattacgatccggctgatgtgctctgcgatcat
ttcttcgtcaatttcttgtcggtgttgtacagattctccgagaaaattgacatttctaaa
ataatcaaagactatccattcttgtcggattcgctgatagatatttctaaagaaacacgc
ctcaagatggacgaagccactgcgatggaattcgtgtcgcagtttaacgatcgtcgagct
gattatcacttctccactgtctgcttcttcttgacaatctccactcaacaccttgtcctt
ccaccactgatgggacgcatcagcgactactcacgccatttaaaagagctcaaacacaaa
ctcgccagtctcaaacagaaactagaaagtgctcagggcttcgagaggcatgaaatcgag
acgaagattcagcaacaagagcaacactggaaaatgatgtcccgccacttgttgtgtttg
aagacacacgctcaggatccggctctgatggcgtctgcactggattttgggaataagcaa
atgcaattcgtcatgagctccctttgtgataatttgaatctactcggagatgatagtcaa
ttgcctgcggagcccacaccaatgttctgtgctcttccacagcactatcttgaagacgtt
ctcgatttctacatattcgcgattaccaacggccagaagcttctaatggagagtagcacg
gaatggattcgacgtcttactgtcctatacactcattatcaatatgttaagagcccattc
ttggttgccaaacttgtgcgagtactcacagcaattcagaatccattgtggcaaaacgtc
gtcagccttcaaatggctcgcgatagcttgctactgtgtatgatcaaattctactcggat
ttcgaagacagcggtgacttctacgagaagtttaatgtgcgtggaaatattcaacacatg
ctcgagaagatgcgcgacgatatgttctacaaggccaaattcatggagatggctagggat
tgtggctcggaatttgttcgtttcgtcaacatggttatcaacgatgccacgtggtgtata
gatgagagtttgtctggactgaagagcattcatgatgtggagaagaagatggcgaataaa
gcggaatgggaggccacagatcaggaaacccgaaatcaggatcttggagtgcttgacgag
gcgaagaggaaggtttccggatggttgggaacggcgaagagcaatttaggattgctgctc
tcaattaccgataactctccagaaccgttccgtacaccagcgcttggagaacgtctagcc
gcgatgctgaatcacaacttgtcgcaattaatgggaaacaagtgtgcagagctgaaagtg
agcaatccgagtagctatggatggcagccacgggagtttgtgacactgctcatttcgatt
tatttgggactcaatgtgccggcatttgtgaagtatatagcgtatgatgaggtgagtgtt
tttggggttttggaaaagctgaaaaccgtttttagtaaaaatcgctgcttgacgattatg
ctcttacaaatcccattttttcagagaacctacagcccagagttcttcaacaacgccatc
gaacgcatgaaaaagaatcaaatcctcggattcagtcaactcgagagattccagcaccta
gccgaggatgttcagaaggagtacgaagcgaaggcggagcttgaggatgagtatgatgac
gttccagaagagttcaaggatccgatcatggacgcgatcatggtggaccccgtcaccctt
ccatcgaagcatatcatggatcgttctgtgatcgagcggcatcttttgagtacacccaac
aatccattcaatcgtgaggcgttgacaaccgccgagcttgtgccgaacgacgagctgaag
gccagaattcaggcgtggattattcagaagagaaacgccaagaaataa
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