KEGG   Caenorhabditis briggsae (nematode): CBG_13421
Entry
CBG_13421         CDS       T01054                                 
Symbol
Cbr-apn-1
Name
(RefSeq) Protein CBR-APN-1
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CBG_13421 (Cbr-apn-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_13421 (Cbr-apn-1)
Enzymes [BR:cbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CBG_13421 (Cbr-apn-1)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CBG_13421 (Cbr-apn-1)
SSDB
Motif
Pfam: AP_endonuc_2 HpaB_N Vfa1 Pox_Ag35
Other DBs
NCBI-GeneID: 8573043
NCBI-ProteinID: XP_002630049
WormBase: CBG13421
UniProt: A8XHT2
LinkDB
Position
II:complement(<2897100..>2899268)
AA seq 389 aa
MKKVTFGDDVMSPAPRKTKQEATPVKKKAKGKKRVQQHIQMTLKKMREEQEAEEAEENEN
VEKPECNCREEADEPAKKKRKKAAEGESEAQKKSRETIGAKVLEASQGSSKMLGFHVSAA
GGLEQAIYNARAEGCRSFAMFVRNQRTWNHKPMEESVVENWWKAVRETEFPLGQIVPHGS
YLMNAGSPEEEKLEKSRNAMVDECQRAEKLGITMYNFHPGSTVGKCEREKCMDTIAETID
YVVERTEKIVLVLETMAGQGNSIGGTFEELKYVIDRVKNKSRVGVCIDTCHIFAAGYDIR
SEKAYEEVMSKFEATIGWNYLKAMHINDSKGDLRSNLDRHEHIGQGKIGKDAFGFLMNDE
RLKGIPMILETPEGKYPEEMMMMYKMEKK
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaaaaaagtgacattcggtgatgacgtaatgtcaccagcaccgaggaaaacgaagcaa
gaggcgacaccggtgaagaaaaaggcgaaaggaaagaaaagagttcagcaacacatacag
atgacgttgaagaagatgagagaagagcaagaagcagaagaagcggaagaaaatgagaac
gttgagaagcccgaatgcaactgccgagaagaggccgacgagccagctaagaagaaacga
aagaaagcagcagaaggcgaatcagaagcacagaagaagtctcgagaaacaatcggagca
aaagttctggaagcatctcaaggctccagtaaaatgctcggattccatgtaagcgctgct
ggtggtctagaacaagctatctacaatgcaagggcagagggatgtcgtagttttgcgatg
ttcgttcgaaatcaacgcacatggaatcacaaaccaatggaggagagtgtcgttgagaat
tggtggaaggcggttcgagaaacggaatttccgctgggtcaaattgtgccccatggatcg
tatctaatgaatgcgggatcgccggaagaggagaagctggagaagtcgaggaatgcgatg
gttgatgagtgtcagagagctgagaaactcggcattacgatgtacaattttcatccggga
tccacggttgggaagtgtgaaagggagaagtgtatggatacgattgccgagacaattgat
tatgtggtggagaggaccgagaagattgtgttagtgctggaaacaatggctggacaaggg
aattcaatcggtggaacatttgaagaactcaagtacgtcatcgatagagtcaagaacaag
tcccgggttggtgtctgcattgacacgtgtcacattttcgcggctggatatgatattcga
agtgaaaaggcatatgaggaggtcatgagtaaattcgaagcgaccattggctggaactat
ttgaaagccatgcatatcaacgattctaaaggagacctcagatcgaatctcgatcgccac
gaacacatcggccaggggaagattgggaaggatgcatttgggtttctgatgaacgatgag
aggttgaaggggattccgatgattctggagacgcctgaaggaaaatatccggaggagatg
atgatgatgtacaaaatggagaagaaatga

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