Caenorhabditis briggsae (nematode): CBG_13447
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Entry
CBG_13447 CDS
T01054
Symbol
Cbr-vab-1
Name
(RefSeq) Protein CBR-VAB-1
KO
K05110
Eph receptor B1 [EC:
2.7.10.1
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_13447 (Cbr-vab-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbr01001
]
CBG_13447 (Cbr-vab-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
CBG_13447 (Cbr-vab-1)
Protein kinases [BR:
cbr01001
]
Receptor tyrosine kinases (RTK)
EPH family [OT]
CBG_13447 (Cbr-vab-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ephrin_lbd
SAM_EPH
fn3
EphA2_TM
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ephrin_rec_like
SAM_TNK
TMEM154
SAM_2
COX2_TM
TSP1_TSH7A-B_C
WSS_VP
Motif
Other DBs
NCBI-GeneID:
8573000
NCBI-ProteinID:
XP_002630069
WormBase:
CBG13447
UniProt:
A8XHR0
LinkDB
All DBs
Position
II:complement(2740753..2763473)
Genome browser
AA seq
1118 aa
AA seq
DB search
MRLYNSRILNPFYSIFLLQLFVIEFVNSHQEVLFDLSKATPATRWDSLALKHDRDDVWME
ETWRNPAATDEKHANQRAYVTCNYDMDQPSNWLFSHFIEVQSARRIYVELLFNIRDCLGF
TDPKSCKETFTVFLKQLKTSHPGSAKIEREQFAKDMKNWQNIGRMARSNSNTTTETIGFE
IEPDTKMIRIAFEEQGICLSLLNVKIYYRVCDEFTDQLVQFPAQVTGAKETDMVRMNGTC
IPNASRKIAGVDLIGLCMATGSAIKTSGECVCDSGYSEIADSNGARCESCPPNTYKPKGQ
SMCKPCPANSVSGEAASSCRCVNGYFRADDEMVSQSCTQPPSRPIKLVANAITATSTRLS
WNEPSSLGGRPEIWYEVRCSGRGECGSVVMTPSDKRLSTRSIQINGLRPSSDYTFLVFAK
NKVSGELAEFSEKSAVIDIRTRSEEEDVPPVTHLRVDASQSDGITIAWSVSDSDIHDFEV
EVRPAIVKKRAFETRHVNQTYTTFIGLRHDTVYQFRVRVKDDLRWSSPISYQLGKGLLSS
SSSTSEEDTQFLNQTGSALLIIIALILVVIAIALCMIVVQKKTKNRKQMSDLDVLDTYKQ
DSMTPDYHTTSRHHHHQGNLPANLHEQLRSTTKLNAPLIPSFGSPISQPPPYYGGVHTNS
GKYKTYVDPTTYEDPYQALIEFTFDISPNDVFITQVIGGGEFGDVCLGGLSRNSPAAAKW
NVASTMARGFESEQYETVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRLIGVVTSS
EPVMIISEYMVNGSLDQYLRNADQRGDKVHWEKITEMLYGIASGMKYLTDMGYVHRVSWI
SDLAARNVLLDHELRCKIADFGLSRGVRSEGSSIEPEYTTNGGKIPVRWTAPEAITHRKF
TPSSDVWSFGVVIWEVCSFGERPYWDWTNQKVISEVMIGYRLPPPMDCPMGLYRIAQWCW
KMERHERPTFTQLLAAFHKYILQPTLIETDPGELPRRVMSQAALNSMNPSYGSVSMPTPP
SSAAPMPSLDDFLRQIGLNHVYGKLVSNNIHSVSDLANTSHLDLLACGLISPECSIVRDG
LNGRIVTSSGSPGNSSGTLHATTRGTRTTRPREEGFFV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttatacaattcgcggattctgaatccgttctactcgatatttctgctacaatta
ttcgttattgaatttgtgaattcacatcaagaagtgctcttcgacctatccaaagccacg
ccagccacccgatgggactctctagcgctgaaacacgatcgagatgatgtgtggatggaa
gaaacgtggcgaaatccggcggcgaccgacgagaagcacgccaatcagcgagcgtacgta
acctgtaattatgatatggaccaacccagtaattggttgttcagtcattttatcgaggtt
caaagtgccagaagaatctacgtcgagctcctcttcaacatccgcgactgtctcggcttc
accgatccgaaatcgtgcaaagagacgtttaccgtattcctgaaacaactgaagacgtcg
catccgggaagcgcaaaaatcgaacgagagcaattcgcaaaggatatgaagaattggcag
aatattggaagaatggcgaggagcaattcgaacacgaccacagaaacgattgggtttgaa
atcgagccggacacgaagatgattcgaatcgcgttcgaggagcagggaatatgtttgtcg
ttgttgaatgttaagatctactaccgcgtctgcgacgagttcaccgatcaactcgtccaa
ttcccagcccaagtgaccggagccaaagagacggatatggtacgaatgaacggcacgtgc
atcccgaatgcgtctcgaaaaatcgccggcgtcgatttgattggactgtgcatggcgacg
ggcagtgcgatcaaaacgtccggagagtgcgtttgtgatagtggatactcggaaatcgcc
gattcgaatggagcgcgttgtgagagctgcccaccgaacacctacaaaccaaaaggacaa
tccatgtgcaagccgtgcccagcaaactcggtgtccggcgaagcggccagctcgtgtcga
tgcgttaatggatacttccgagccgacgatgagatggtctcgcagtcgtgcacacaaccc
ccatcccgtcccatcaagctcgtcgccaacgccatcaccgccacatcaacccgtctctca
tggaacgaaccatcaagcctcggaggtcgcccggagatctggtacgaagtccgttgctca
ggacgtggagagtgtggatccgttgtgatgacgccgtccgacaagcgactctcaacacga
tcgatccagatcaacggtctccgaccgtcctccgactacacatttttggtgttcgccaag
aataaagtgtctggagagttggccgagttttctgagaagagtgcggtcattgatattcgg
acgaggtcggaggaagaagacgttccaccagtgacccatttaagagtcgatgccagtcaa
tcagatgggattactatcgcgtggagtgtttcggattctgatatccatgattttgaagtg
gaggttcggccagcgatcgtcaagaagcgagcattcgagacccgtcacgtcaatcagaca
tacacgacattcatcggacttcgacatgatacagtataccagtttcgagtgcgagtcaag
gatgatttacggtggagcagtccgattagctatcaactcggaaagggattgctcagctca
tcatcgtcgactagcgaagaggatacacagtttttgaaccaaactgggtcagcattgctc
atcattatcgcgttgatactggtggtgatcgctattgcgttgtgtatgattgtggtgcag
aagaagacgaaaaacaggaagcagatgagcgatttggacgttttggatacttataaacaa
gactcgatgacacccgactaccatacgacgtcacgacatcatcatcatcaaggcaatctt
cccgccaatttgcacgaacagcttcgctcgaccaccaagttaaacgctccactgatccca
tcgttcggctcgccaatctctcaacccccaccatactacggtggcgttcacacgaactcc
ggaaaatacaagacctatgtggacccgacgacgtacgaggatccctaccaagcactcatc
gagttcacattcgacatctcaccaaacgacgtcttcataactcaagtgatcggtggtgga
gagtttggcgacgtctgtctgggtggtctttcgaggaattcgccggcggcggcgaagtgg
aatgtcgcaagtacgatggcacgtggattcgaatctgagcaatacgagacagtggccatt
aagacgttgaagtcagggtccagtgcgaaggccaaagcagaattcttgacagaagccaca
attatggggcagttctcacatccgaatgtgattcggttgattggcgtcgtgacgtcttct
gaacccgttatgattatctctgaatacatggtcaatggatcactggatcaatatcttcgg
aatgcggatcaacgaggggataaggttcattgggagaagatcaccgagatgttgtatgga
attgcgtcggggatgaagtacctgactgatatgggatatgttcatagggtgagttggatt
tccgacctcgccgcccgcaacgtcctgctcgaccacgaactccgctgtaaaatcgccgat
ttcggactatcgcgtggcgtcagaagcgagggctcatcgatcgaaccggaatacacgacg
aacggcgggaagattccagtcagatggacggctccagaagcaatcactcatcgaaaattc
acgccttcatcggacgtctggtcattcggagtcgtcatttgggaagtttgctcattcggc
gaacgaccgtattgggattggacgaatcaaaaagtgataagcgaggtgatgattggctat
cgattaccaccgccaatggattgtccaatgggtctgtatcgaattgctcagtggtgttgg
aagatggagagacatgagaggccgacatttacacagcttttggccgcattccataagtac
attctacagccaacactgattgagacggatcctggagagctgccaagacgggtgatgagt
caggctgcgttgaattccatgaatccatcgtatggttcggtttccatgccaacgcctccg
tcatcggccgctccgatgccatcgttggatgattttttgagacaaatcggtctaaaccac
gtctacggtaaactggtgtccaacaacatccactcggtatcagacctggccaatacctcg
cacttggatctcctcgcgtgtggactaatttctcccgaatgctcaatcgtccgcgacgga
ctcaacggacgaatcgtgacgtcgtctgggtcgcctggcaactcgtctggaacgctgcac
gcgacgacacgtggcacacggacgacgcgaccgcgcgaggaaggattctttgtgtag
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