Caenorhabditis briggsae (nematode): CBG_13531
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Entry
CBG_13531 CDS
T01054
Name
(RefSeq) Protein CBG13531
KO
K12859
U5 snRNP protein, DIM1 family
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_13531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_13531
Spliceosome [BR:
cbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CBG_13531
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
zf_RING_Vps8
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
8576986
NCBI-ProteinID:
XP_002634991
WormBase:
CBG13531
UniProt:
A0AAE9EZY6
A8XI41
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Position
IV:complement(17274301..17274831)
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AA seq
142 aa
AA seq
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MSYMLPHLENGWQVDQAILAEEDRVVVVRFGHDWDPTCMQMDETLFKIAPKVKNFAVVYL
VDITKVPDFNKMYELYDPCTVMFFFRNKHIMVDLGTGNNNKINWAVTDGQELIDIIETVY
RGARKGRGLVISPKDYSTKYKY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatatgctccctcacttggagaatggatggcaggtcgaccaagccatcttagcc
gaagaggatcgtgttgtggtggtgcgatttggacacgattgggacccaacatgtatgcaa
atggacgagacactcttcaaaatcgcaccgaaagtcaagaatttcgccgtcgtttacttg
gtagatatcacgaaggtgccagacttcaacaagatgtacgaattgtacgatccatgtacg
gtcatgttcttcttccgcaacaaacacatcatggtggatttgggaaccggtaacaacaac
aagatcaactgggcagttaccgatggtcaggagctaatcgacatcatcgagacagtctac
cgaggcgctcgcaaaggaaggggtctcgtcatctcaccaaaggactactccaccaagtac
aagtactaa
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