Caenorhabditis briggsae (nematode): CBG_13539
Help
Entry
CBG_13539 CDS
T01054
Symbol
Cbr-eri-1
Name
(RefSeq) Protein CBR-ERI-1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_13539 (Cbr-eri-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_13539 (Cbr-eri-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CBG_13539 (Cbr-eri-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
CBG_13539 (Cbr-eri-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
8576994
NCBI-ProteinID:
XP_002634999
WormBase:
CBG13539
UniProt:
A8XI49
LinkDB
All DBs
Position
IV:complement(<17294786..>17298783)
Genome browser
AA seq
578 aa
AA seq
DB search
MTAEQNPEDEKYLESLKNLLKVSEEHETNQQTNEEVDEDDVETEESDIQPTIPPEHQIEP
AERIEPLQSMVDPDYVRKVIRTMDTMSTDQLRQALQRIKVSTGGNKKTLRKRVAQYYRKE
NALLNRKLEPNSDKTLRYFDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISE
FRSYVRPVKNPKLSDFCIQFTKIAQETVDEAPYFREALEKLMQWMRKFGLGEKNTRFAFV
TDGPHDMWKFMQFQCILSNIRMPHMFRNFINIKKTFKEKFNGLMKGNGKSGIENMLERLD
LTFIGNKHSGLDDARNIAQIAIQMMKLKIELRINQKCSWVEPKNQIIKDDDDLDDNVDTI
DVSRRDFQLWLRRLPLKLSSVTRREFLSEEYLDCESCDDMTDDKHDRQSFAEKMTIRQQI
EALDEEEREKMKNEPPIVRNGPPKPVPPPPATTTQENDDSENDEEFLRDYQRQVELLDME
ESLDAISNSNGIELEEVWECAGSEMAAESVSLDNLAYSSSESLSLEQFQYPTSQNSTHPP
TPETDVMMNSDSIESMELMAPPPKNSLASTNRNNSRNY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagaacagaatccagaagacgagaaatatctagaaagtctgaaaaaccttctc
aaagtcagcgaggagcacgagacaaatcaacagacgaatgaagaagtcgacgaagatgac
gtggaaaccgaagaatcagatattcaaccaacgattccaccagagcatcagatagaaccg
gctgaaaggattgagccacttcaatcgatggtcgatccggattatgttcgaaaagtgatt
cgaacgatggacacaatgagtacggatcagttgagacaggcgctacagagaatcaaagtt
tcaacgggaggaaacaaaaagacgcttcgcaagcgagtggcacaatactatcgaaaggaa
aatgcactgttgaatcggaaattggagccgaattctgataaaactctgcgttatttcgat
tacttaattgccattgatttcgaatgtacatgtgtcgaaatcatctacgattaccctcat
gaaatcattgaactgccagctgtcctgattgatgttcgagagatgaaaattatcagcgag
tttcgatcatacgtccggccagtaaaaaatccaaaactgagcgatttctgtatccagttc
accaaaatcgctcaagaaactgtcgacgaagcaccatacttccgcgaggcgcttgaaaaa
ttgatgcaatggatgagaaagtttggactaggagagaagaatacaagatttgcttttgtg
acggatggacctcacgatatgtggaaattcatgcaatttcaatgcattctatccaatatc
cgaatgccacacatgttccgaaactttattaatatcaagaagacgttcaaggagaaattc
aacggattgatgaaaggaaacggaaagtctggaatcgaaaatatgttggagcgtcttgat
ctcacattcatcggaaacaaacacagcggactggatgatgctcggaacattgctcaaatc
gcaattcaaatgatgaagctgaaaattgagttgagaatcaatcaaaagtgctcgtgggtg
gagccaaagaatcagatcataaaagatgacgatgatcttgacgacaacgtggatacaatc
gatgtctctagacgtgattttcaactctggctgcgtcgtctacccctaaagctgtcgagt
gtaacgcgtcgagaattcctgagcgaggagtatctggattgtgaatcttgtgatgatatg
acagatgataagcacgatcgccaatcgttcgccgagaagatgacgattcgtcagcaaatc
gaagcactggatgaggaggaacgggagaaaatgaagaatgagccaccgatcgtccgcaat
ggaccgcccaaacctgttcctccaccgcctgccacaactacacaagaaaatgatgattcg
gagaatgacgaagagttccttagagattatcagcggcaggtggagttgttagatatggag
gaatccctagacgctatctctaattcgaatgggattgagctggaggaggtgtgggagtgt
gccggatcggagatggctgcagaatctgtgtcactcgacaacttggcgtattcctcatca
gaatcgctttcccttgaacagttccaatatcccacatcacaaaattcaacacatccgccg
acaccggaaacagatgtaatgatgaattcggactcgatagaaagtatggagttgatggct
ccaccacccaagaattcgttggcatcgacaaatcggaataatagccgaaattactag
DBGET
integrated database retrieval system
