KEGG   Caenorhabditis briggsae (nematode): CBG_13602
Entry
CBG_13602         CDS       T01054                                 
Symbol
Cbr-vps-25
Name
(RefSeq) Protein CBR-VPS-25
  KO
K12189  ESCRT-II complex subunit VPS25
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CBG_13602 (Cbr-vps-25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_13602 (Cbr-vps-25)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_13602 (Cbr-vps-25)
Membrane trafficking [BR:cbr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    CBG_13602 (Cbr-vps-25)
Exosome [BR:cbr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CBG_13602 (Cbr-vps-25)
  Exosomal proteins of colorectal cancer cells
   CBG_13602 (Cbr-vps-25)
SSDB
Motif
Pfam: ESCRT-II WHD_CHMP7_1st Penicillinase_R DUF4423 MarR_2
Other DBs
NCBI-GeneID: 8582464
NCBI-ProteinID: XP_002640469
WormBase: CBG13602
UniProt: A0AAE9E5X0 A8XIA2
LinkDB
Position
I
AA seq 179 aa
MATTSAFKWPWQYDFPPFFTIQKSLNTKDKQLEAWARLVIDYAQHNKIYSLDIAEATTSE
LFNNQKLNRRLSTDGVNTVLQYLEQKKLIEFTDNGRTRFHIFWRRPDVWANMIYQWAVEN
AFLNTPLTLYEITHGDDTTNESFHNLEREILMKALTCLEDQRRAQLMNIGGDNEGVKFV
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcgacgacttcagctttcaaatggccatggcaatacgattttccgccgttttttaca
atccaaaaatcgctgaacacaaaagacaagcaactggaagcatgggctcgtttggtcatc
gactacgctcaacacaacaaaatctactcgttggacattgccgaagcgacgactagtgaa
ctattcaataatcagaaactcaatcgccgcctctccacggatggtgtcaacacagttcta
cagtatctggagcagaaaaaactaatcgaattcaccgacaacggccgaactcgtttccac
atcttctggcgtcgtcccgatgtttgggcgaatatgatttatcaatgggcagtggagaat
gcgttcctgaatacaccattgacactttatgagatcacacatggagatgacacaactaat
gagtcattccacaacctggagcgtgaaattctgatgaaggcgttgacgtgtcttgaagac
caacgacgagcccaattgatgaatatcggtggagacaacgaaggcgtcaaatttgtctga

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