Caenorhabditis briggsae (nematode): CBG_13606
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Entry
CBG_13606 CDS
T01054
Symbol
Cbr-usp-3
Name
(RefSeq) Protein CBR-USP-3
KO
K11986
ubiquitin carboxyl-terminal hydrolase 3 [EC:
3.4.19.12
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_13606 (Cbr-usp-3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_13606 (Cbr-usp-3)
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CBG_13606 (Cbr-usp-3)
Peptidases and inhibitors [BR:
cbr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CBG_13606 (Cbr-usp-3)
Ubiquitin system [BR:
cbr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CBG_13606 (Cbr-usp-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
8582468
NCBI-ProteinID:
XP_002640473
UniProt:
A8XIA6
LinkDB
All DBs
Position
I:11562678..11564737
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AA seq
538 aa
AA seq
DB search
MLCNHIKVEQCVERVPKTMFRKKQDMEDNNLFLEGNSNRGKPSKGQERFKTFCDECDNCN
KSLMCLTCGRILCGRDDSGHAIEHFEESRHPVVMDCITFELYCYTCDDEVSLDFEPSLYG
VLKSLKLLFDREDIMEGGEGPTINANTSPGLTNVSTNFATKLHVVGEKKGSKKKRGKKGK
VSPMFDTPFQGAVVIDCTNPPASNGGVASSSSSTEIPYRPRGLRNLGNTCFMNAVLQALA
CIKDFREYILNLPSLEDYVEDEKIAQNGNCFLTDEYQKLLASMSARNFRDPTSPNEFREA
FVSACPRFRGFRQHDSHEFLRYLLDQMHTEMRKCRNLPEMPDDKTTPISKSFEGTLQSSV
ICQTCRNVSNKMDDFMDLSLDVPRVSKARYRLSDCLDLFFQRELLEKGEKPECSKCKSKQ
TCSKQMFIKKLPEVLCLHIKRFRDNGGKIDTLIEFPLTGLSVDDFLTEDSDEPPCVYELH
SIIVHIGYGCSSGHYIAFGRRGAKWYQFDDTVVKAMETSNITKQRAYVLMYTKSTRKP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcaatcacattaaagttgaacaatgcgtcgaacgggttcccaaaacgatgttc
cgcaaaaagcaagacatggaggacaataatttattcctggaaggaaactctaaccgaggg
aagccttctaaaggacaagaaagattcaaaaccttctgtgacgagtgcgataattgcaac
aaatcgttgatgtgtctcacttgtggtcgaattttatgcgggagagatgattcagggcat
gctattgagcatttcgaagaatcaagacatccagttgtcatggattgtataactttcgaa
ctctattgctatacatgtgatgatgaggtgtctctggattttgaaccttcgctctatgga
gttctaaaatcgctgaagcttctgttcgacagagaagatataatggaaggaggagaagga
ccaaccataaatgcgaatacctctccaggtctcaccaacgtctccactaatttcgccaca
aaattacacgttgtcggtgagaagaaaggatcgaagaagaaaagaggaaagaaagggaaa
gtgagtccaatgttcgatacaccattccaaggagctgtcgtcatcgattgcacgaatcca
cctgcatcaaatggaggtgtcgcttcttcatcatcgtcaactgagattccgtatcggcca
cgtggattgaggaatctgggaaacacatgcttcatgaatgcagttctgcaggcattagct
tgcataaaagacttccgggagtatattctgaatctgccatcactggaagactatgtagaa
gacgagaagattgcacagaatgggaattgtttcttgacagatgaatatcaaaaactgctg
gcatcaatgtcagcgcgaaatttccgagatccaacttctccgaacgaatttcgcgaagcc
ttcgtctccgcctgtccccggtttcgtggatttcgacaacacgattcgcacgaattcctt
cgatatcttctagatcaaatgcacacggaaatgaggaaatgcaggaatcttccagagatg
cctgatgacaaaactacaccgatttccaagagtttcgagggaacacttcaaagtagtgtc
atttgtcaaacttgtcggaatgttagcaataaaatggacgattttatggatctctcgctg
gacgtaccacgagtctcaaaagcgcggtatcgtttatcggactgcctcgacctatttttc
caacgagaacttttggagaagggagagaaaccggaatgctcaaagtgcaaatcaaagcag
acgtgttcgaagcaaatgttcattaagaagttgccagaagtcctctgcctccatataaag
cgattccgtgataatggtggcaaaattgacactcttatcgaattcccgctaaccggatta
tcagttgatgactttttaacagaagacagtgacgagccaccgtgtgtctacgagcttcat
tcgatcattgttcatattggatatggttgctcatccggtcactatattgcattcggccgc
cgtggcgccaaatggtatcaattcgatgatacagtagtcaaggcaatggaaacgagtaac
atcacaaaacaacgggcatacgtactgatgtacacgaaatccactagaaaaccataa
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