Caenorhabditis briggsae (nematode): CBG_13780
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Entry
CBG_13780 CDS
T01054
Name
(RefSeq) Protein CBG13780
KO
K17339
atlastin [EC:3.6.5.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_13780
Membrane trafficking [BR:
cbr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
CBG_13780
Autophagy
ER-phagy
ER-phagy recepters
CBG_13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
DUF5903
Motif
Other DBs
NCBI-GeneID:
8574527
NCBI-ProteinID:
XP_045095253
WormBase:
CBG13780
LinkDB
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Position
IV:complement(1422758..1430291)
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AA seq
462 aa
AA seq
DB search
MPKVVVISVAGAFRKGKSFLLNFFLEYLYNLHKSQQSDSSLEWLTDDCQLHGFHWRAGVK
RDTVGIWLWGEPIMIESVTGEMFAVLLMDTQGTFDNNSTYQQCMTVFALSTIVSSVQIYN
VVDNIQEDALQHLSLFVEYGRMAMEQPHNFGKPFQQLVFCVRDFKNQEEYEFGENGGTDF
LENVLQTNPEQPEEIKVVRELLREYFEDIQCYLLPHPGYKVAERQSFRGHVKDLRPLFRE
ELKKMVPNLLGPHNLKPKIVNGKTVTCRKMMQYFKEYAASFDGETLPQPQSILNANAKLI
CIEAAHEAKVNYCRGMDRSTYGTRMMSEKKLLEAHIKHGITALNIYDKCPKIGSNEVRRL
LLEKLQEDINAELERYKRLNEAKRVTGCASAMLACGDSVFLGIGLGSAASGAIAGAVLTL
QAGVVSLGIVAIPISLTTLFFIWAYVWTKPCFERITNKNKTR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagtagtggtaatcagtgtagcgggtgcatttcgaaagggaaaaagttttctg
ctaaacttttttctcgaatatttgtacaatttgcacaaatctcaacagagtgatagttca
ttggaatggttgaccgacgattgtcaacttcatggatttcattggagagctggtgtcaag
agggatactgtaggaatctggctatggggtgagccaataatgatcgaatcggtgacggga
gaaatgttcgctgttttattgatggacacacaaggaacattcgacaacaattcaacatat
caacagtgtatgacggtttttgcattatcgacaattgttagtagtgtacagatctacaac
gtagtggataacattcaagaggacgcacttcaacatctttcgcttttcgtggagtacggt
agaatggcaatggagcaaccgcacaattttggaaaaccgtttcagcaactagtcttctgc
gttcgcgatttcaaaaatcaagaagaatacgagtttggagaaaacggaggcactgatttc
ctggaaaacgttttgcaaacaaatccagaacagcctgaagagatcaaagtggtccgggag
ttgttgagagagtatttcgaggatattcagtgttatttactaccacatccaggatacaaa
gttgcagaacgacagagtttcagaggacatgttaaggacctccgtcccctcttccgtgaa
gaactcaaaaagatggtgcccaaccttctgggtccacataacctaaaacccaaaatcgtg
aatggcaaaaccgtaacctgtcgaaaaatgatgcaatacttcaaagagtacgcggcttcc
tttgatggagaaactcttccacaaccacagagtattctgaacgcaaatgcaaaactaatt
tgcattgaagcggcacacgaagctaaggtgaactactgtagaggaatggatcgatctacg
tatggaactaggatgatgtcggagaagaaacttctcgaagcacatatcaaacatggaatc
actgcgttgaatatttatgataaatgcccaaaaattggatcgaatgaagtaagaaggttg
ttgttggagaagttgcaagaggatattaatgccgaactggagcgatacaaaagactgaac
gaagcgaaacgagtgacaggatgtgcgtctgcaatgttggcgtgtggagattctgtattt
ttgggtatcggattgggcagcgctgctagtggagcaattgcaggtgctgttctgaccctt
caagctggcgtcgttagtcttggaatcgtcgcgattcccatttcattgacaacacttttc
tttatttgggcctatgtttggacgaaaccatgttttgaaagaattaccaataagaataaa
actagatga
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