Caenorhabditis briggsae (nematode): CBG_13969
Help
Entry
CBG_13969 CDS
T01054
Name
(RefSeq) Protein CBG13969
KO
K13091
RNA-binding protein 23/39
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_13969
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
General mRNP proteins
CBG_13969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_PARP14_3
RBD_DEAH11
RRM_5
PRP38_assoc
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
8576846
NCBI-ProteinID:
XP_045095286
WormBase:
CBG13969
LinkDB
All DBs
Position
IV:15775498..15779417
Genome browser
AA seq
586 aa
AA seq
DB search
MTDAAMDIDAMLDGAMEDAKNEKSRGSQRSPARSNRSRSRSRDRKRSRSRSKDRRRSRSR
DRGDRRRSRSRSRDRRRRRSGSRDRRRSRSRDRGGYRRRSRTRSRDRRRSPPRRRDRRSP
VRRSPRRSPPRSRLPGPERRDVMPFNPRHSPPKNAKLELSAEERDQRTLLIMQIARDTRP
RDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ
VKETVIFGPNLIFQRTCAERNRIANSSVASTLGFVAPGGKGPAQVLVENLHPKIDDKMLG
EVFDSFGRIDKLDVEKDMNGENKGFAVITFRNADEAQKACEQLNDFEVAGRKMRLTIKQE
PTPQQSIKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAA
QHAGNSQIPSIATQCFLLSNMFDPAKETEPQWDHDIREDVIEQCACHGGALHVFVDKGSQ
QGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLFPDAVHARLPLSTRNV
VPPPQVPMMTVPQQQVMANGYGYGMIPGQGAAPAQAPYGGAGGYYQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcagcaatggacatcgacgcgatgctcgacggagccatggaagacgccaaa
aacgaaaagagccgaggcagccagcgatcaccggcgcgaagcaatcgatcgagatctcgc
tccagagacaggaagaggagccgcagtcgaagcaaggatcgccggcgcagccgatccagg
gatcgtggagatcgacgtcgttcgagaagtaggagccgtgacaggagacggagacgttca
ggaagccgggatcgtcggaggagccgcagccgtgatcgaggaggatatcggcgacgatca
agaacccgctcgcgcgaccgccgtcgctctccaccacgccgtcgtgatcgtcgctcgcca
gtgagaagatccccgagaagaagtccgccaagaagccgcctaccaggaccagaacgtcgc
gatgtgatgccattcaatccacgtcactcgccaccgaaaaacgcgaaattggagctatcc
gcagaggaacgagaccaacggacactgctgatcatgcaaatcgctcgtgatactcgtcca
cgcgacttggaagagttcttctcgtcagtcggcgccgttcgggatgttcggattatcacg
gattcgagaacaggaagatccaaaggcatctgttatgtagagttttgggatgaggagagt
gttccgttgggattggcgttgaatggacaacggttgatgggtgctccgttacagattcag
gtaaaagaaactgtgatttttggtccaaatctaatatttcagcgaacatgcgccgaaaga
aaccgcattgccaactcgtcagtcgcctccaccttaggattcgttgctccaggaggcaag
gggccggctcaggtgctcgtcgagaatctccacccgaaaattgatgataagatgctgggc
gaggtattcgattcgtttggacgcatcgataagttggatgtggagaaggatatgaatgga
gagaacaaaggattcgctgtcatcacgttccgaaacgccgacgaagctcagaaggcgtgt
gagcaattgaacgacttcgaagtggccggacgtaaaatgcgcttgacgatcaaacaggag
ccaacaccacaacaatctatcaagaaggaggaggcatcgatacatcagagatcgctagat
gacgttggagatcgtcagggcttctcactgggtgccggcggacgtcaacagctaatggca
aagctcgcacaaggaacaggatccggaatggagctaacagcatcagctcagatggccgct
caacacgctggaaactcgcaaatcccatcaatcgccacacaatgcttccttttatcaaac
atgtttgatcccgcgaaagagaccgaaccacaatgggatcatgatattcgagaggatgtc
attgagcagtgtgcatgtcatggaggagcactacacgttttcgtggataagggatcgcag
cagggaaacgtctacgtcaaatgtccatccatcgcgattgctcatcaagcggtaagcgcg
ctccatgggcgatggttcagtggaaaagtgattacggcgaactacgtgcccgtcaactcg
taccacgatctgtttccggacgcggttcatgcacgacttccactgtcaacacggaatgtc
gtcccaccaccacaggttcccatgatgactgtaccacaacagcaggttatggctaatgga
tacggctacggaatgattccaggacaaggagccgcaccagcacaagcaccatacggagga
gccggtggatactatcaataa
DBGET
integrated database retrieval system