Caenorhabditis briggsae (nematode): CBG_13974
Help
Entry
CBG_13974 CDS
T01054
Name
(RefSeq) Protein CBG13974
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_13974
Enzymes [BR:
cbr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CBG_13974
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CBG_13974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
8576850
NCBI-ProteinID:
XP_002634856
WormBase:
CBG13974
UniProt:
A0AAE9AG99
A8XIX1
LinkDB
All DBs
Position
IV:complement(15766047..15767164)
Genome browser
AA seq
220 aa
AA seq
DB search
MSEILEIPISSRQNRRKVEICHVDGRFFASKSDSAYLESDARVSINRSAPSTTGSAPCSK
NNWQFNSNLCPILAELVAVLVEFGFADVFRLQMTSSESVVATTSSESGFSKTPMKMEEIP
FPDDREFRIKRLVVRDFWRKGYFLADGTRFGGDYLVYTKSPNQCHAEFVLLCTPCSDEKR
ISAMRCCNQVKKTLILATTPSGDNLKPHYTKCEWFRPELF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagattctggaaattccaatttccagcagacaaaatcggcgaaaagtggagatt
tgccacgtggatggacggttttttgcatcgaaaagtgactccgcctacttggaatccgat
gctcgtgtctcgattaatcgctccgccccctccacaacaggctccgccccttgttcaaaa
aataattggcaatttaactcgaatttatgcccaattttggcagaattagtggcagttttg
gtggaatttggattcgccgacgtcttcagactccagatgacgtcatcagaatccgtcgtc
gccacgacgtcttctgaatcgggattctcgaaaactccgatgaaaatggaagaaattcca
tttccagatgatagggaatttcgaattaaacgactcgttgtgagggatttttggagaaaa
ggatacttcttggctgatggtactcggttcggcggtgattatctggtctacaccaagtcg
ccaaatcagtgtcacgctgaattcgtgctcctctgcacaccgtgttccgacgagaagcga
atttcggcgatgaggtgttgtaatcaagtgaagaagacgttgattctggcgacgacgcct
tctggagataatctgaaaccgcattatacgaaatgcgaatggtttcgaccggaattattt
tga
DBGET
integrated database retrieval system
