KEGG   Caenorhabditis briggsae (nematode): CBG_14204
Entry
CBG_14204         CDS       T01054                                 
Symbol
Cbr-unc-78
Name
(RefSeq) Protein CBR-UNC-78
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cbr04990]
    CBG_14204 (Cbr-unc-78)
Domain-containing proteins not elsewhere classified [BR:cbr04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   CBG_14204 (Cbr-unc-78)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_IFT122_1st eIF2A NBCH_WD40 Beta-prop_WDR75_1st RMC1_N Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR19_2nd Beta-prop_DCAF12 Beta-prop_IFT80_2nd PEP5_VPS11_N Beta-prop_ELP1_1st PROPPIN Beta-prop_VPS8 Beta-prop_RIG_1st NHL WD40_like Cytochrom_D1 PQQ_2 DUF7165 GspH DUF5655
Other DBs
NCBI-GeneID: 8586365
NCBI-ProteinID: XP_002644370
WormBase: CBG14204
UniProt: A0AAE8ZRR6 A8XJI3
LinkDB
Position
X:complement(8487655..8490056)
AA seq 611 aa
MSEFSQTALFPSLPRTARGTAVVLGNTPAGDKVLYCNGTSVYTCPVNNLTNTEIYTEHSH
QTTVAKYSPSGYYCASGDIHGNVRIWDTTQTTHILKTTIPVFSGPVKDIAWDSESKRIAA
VGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIVSGSDDNTVAIFEGPPF
KFKSTFGDHTKFVHSVRFNPDGSLFASTGGDGTIILYNGADGTKVGVFEDDSLKGVAHSG
SVYGLTWSPCGSKIATASADKTVKIWNVSTLKVEKTVTIGSKIEDQQLGIIWTKQALVSI
SATGFVNLINPELGSVDEVRYGHNKAITALATSSDGKTLYSADAEGHITAWETATGKSNR
IIPEIHATMITGIKSTSNGNLFTVSWDDHLKVVPAGESSVDSSKVVSAKLSSQPLGLAVS
ADGHIAVAACYKHVAIYVQGKLTEVPIGFNSSCVALSSDKQLVAVGGQDSKVHVYKLSGS
SLSEVKTISHAAEITSVAFSNNGAILVATDQSRKVILYIVANNFELAHTHSWTFHTAKVA
CVSWSPDNNRLATGSLDNSVIIWNMSKPSDHPIIIKGAHAMSSVNSVLWLNATTIVSAGQ
DSNIKFWNVPL
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtccgagttctctcaaactgctctattcccatcacttccaagaaccgccagaggaact
gcggtagttttgggaaacactcctgccggtgacaaagtgctctattgcaatggaacttcg
gtttacacatgtccggtgaacaatctcactaatactgagatctacactgagcactctcat
caaaccacggtggccaaatatagtccaagtggttactactgcgcttctggagacatccat
ggaaatgttcgaatctgggacaccactcaaaccactcacatccttaaaaccactattcca
gtcttttcgggaccagtcaaagatattgcatgggatagtgaaagtaagagaatcgctgcc
gttggagagggaagagagcgcttcggacatgttttcctttttgacaccggaacttccaat
ggtaatttgactggacaggcgcgcgcaatgaacagtgtcgacttcaaaccatcgcgtccg
ttccgtattgtgtctggatctgatgacaacacggttgcaatttttgaaggaccaccattc
aagtttaagagtacctttggcgaccataccaagtttgttcactctgtccgtttcaaccct
gacggatccctctttgcttcaactggaggagatggaactatcattctctacaacggagct
gacggaaccaaagtcggagtatttgaagacgactcgttgaaaggtgtcgcccactctgga
agtgtgtacggtctcacctggagtccatgtggatcgaaaatcgcaacagcttctgccgat
aaaaccgtgaaaatctggaatgtgtctactttgaaggttgagaagactgttacaattgga
tcgaagattgaagatcaacagcttggaatcatttggaccaagcaagcattggtatcgatt
tccgccactggatttgtcaatcttatcaacccagagcttggaagtgttgatgaggtcaga
tatggacacaataaggctattactgctcttgcaaccagctctgatggaaagacactttac
agtgctgatgctgaaggtcatatcactgcctgggaaaccgccactggaaaatccaaccgt
atcatcccagagattcatgctaccatgatcactggaatcaaatccacttccaatggaaac
ttgttcactgtcagttgggacgatcaccttaaagttgtccccgctggagaatctagtgta
gattccagcaaggttgtcagcgccaaactctcttctcaaccactaggacttgctgtttcc
gctgatggacatatcgcggtggctgcttgctacaaacacgtggcaatttacgttcaggga
aaattaacagaagtgccaattggtttcaactcatcgtgtgtggcactttcaagcgataag
caattggtagctgttggtggacaagattccaaggtccatgtgtataagctgtctggatcc
agtctgtcggaagtcaaaactatttcacatgctgctgaaatcacttctgtcgccttctca
aacaacggagccattcttgtagcaaccgatcaatctagaaaggttatcctttacatcgtc
gccaacaacttcgaattggctcacacccattcttggactttccacaccgccaaggtagct
tgcgtatcttggtctcctgacaacaaccgattggctactggatccttggataactcggtt
attatttggaacatgagcaagccatctgatcatccaatcatcatcaaaggagcccacgca
atgtcctctgtcaactcggttctctggttgaacgcaaccactattgtttctgctgggcag
gattcgaatatcaagttctggaatgttccactttaa

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