KEGG   Caenorhabditis briggsae (nematode): CBG_14378
Entry
CBG_14378         CDS       T01054                                 
Symbol
Cbr-taf-11.1
Name
(RefSeq) Protein CBR-TAF-11.1
  KO
K03135  transcription initiation factor TFIID subunit 11
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CBG_14378 (Cbr-taf-11.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_14378 (Cbr-taf-11.1)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CBG_14378 (Cbr-taf-11.1)
SSDB
Motif
Pfam: TAFII28 CBFD_NFYB_HMF eIF3_subunit TPR_NUP160_120_M
Other DBs
NCBI-GeneID: 8586487
NCBI-ProteinID: XP_002644491
WormBase: CBG14378
UniProt: A0AAE9CUC2 A8XJV4
LinkDB
Position
X:9359925..9361803
AA seq 352 aa
MGDANDLFGGLSESSGSSDEEDAITDIVPPKNQDVLADLALSDEDDDLDDLIEKSPSPSK
SGPSSVELQPPQPLPTRPPVVFSLSDDEDSMDMPDIQQMQRNAAAAAAAAAAEAAEKAAA
VAEAAAKEKAAEEARLAEIKAEQEKAAEKRRRLEYIVKVELPMKQPRLDEGPSSSRPGPS
HSRIRDDSLSLEGFEFSKANEAKFQALIQRHQTEADGGPPPPRPRVPQLPPVPEDENEIA
RLKSQILLSNFSQEQLERYESYRRSSFQKSTIRRLINQFTGGANVNQSVVIAIAGLAKVF
VGEVVEEALDIRDLDEEAARNPLQPEHVRQAFLKLGEQGKLYPPIGPRSDGL
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgggagatgcgaacgatttgtttggaggtctcagcgaaagcagtgggagcagtgacgag
gaggacgctatcactgatattgttcctccaaagaaccaggacgtgcttgctgatttagct
ctgagtgatgaagacgacgatctagacgatttgattgaaaaatcaccatcgccatcaaaa
agtggaccgtcatcagttgaattacaaccaccacaaccgctaccaacaaggcctccagtg
gttttttcactttccgacgacgaagactcaatggacatgccggatattcagcaaatgcaa
cggaatgcagctgcagcagccgccgccgctgctgccgaagctgcagaaaaagctgctgca
gttgcagaagctgctgcaaaagagaaagctgccgaggaagcgagattggctgaaattaag
gcagaacaagagaaagcggctgaaaaacggagacgattggaatacattgtcaaggtggag
ttaccaatgaaacaaccaagactggacgagggaccgtcgagttccagaccaggacctagt
catagccgcatccgtgatgacagcctttcgctggaaggtttcgagttcagcaaagccaac
gaagcaaaattccaagctctgatccaacgccatcaaacggaagccgacggcggtccacca
ccaccccgtccacgtgttcctcaacttccaccagtgccagaagacgaaaatgagattgca
cgtttgaagtcacaaattcttctgtccaacttctcacaagagcaactggagcgctatgaa
tcatatagaagatcttctttccaaaagtccaccattcgtcgtctgattaatcaattcacc
ggtggagccaacgtcaaccagagtgtcgtcatcgccatcgccggattggctaaagttttc
gttggagaagttgtcgaggaagcactggacattcgtgatttggatgaggaggctgccagg
aatccacttcaaccagaacatgttcgtcaggctttcctcaaactcggtgagcaagggaag
ctctatccaccaattggcccaagatccgatggactatga

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