Caenorhabditis briggsae (nematode): CBG_14378
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Entry
CBG_14378 CDS
T01054
Symbol
Cbr-taf-11.1
Name
(RefSeq) Protein CBR-TAF-11.1
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBG_14378 (Cbr-taf-11.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_14378 (Cbr-taf-11.1)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CBG_14378 (Cbr-taf-11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
eIF3_subunit
TPR_NUP160_120_M
Motif
Other DBs
NCBI-GeneID:
8586487
NCBI-ProteinID:
XP_002644491
WormBase:
CBG14378
UniProt:
A0AAE9CUC2
A8XJV4
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All DBs
Position
X:9359925..9361803
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AA seq
352 aa
AA seq
DB search
MGDANDLFGGLSESSGSSDEEDAITDIVPPKNQDVLADLALSDEDDDLDDLIEKSPSPSK
SGPSSVELQPPQPLPTRPPVVFSLSDDEDSMDMPDIQQMQRNAAAAAAAAAAEAAEKAAA
VAEAAAKEKAAEEARLAEIKAEQEKAAEKRRRLEYIVKVELPMKQPRLDEGPSSSRPGPS
HSRIRDDSLSLEGFEFSKANEAKFQALIQRHQTEADGGPPPPRPRVPQLPPVPEDENEIA
RLKSQILLSNFSQEQLERYESYRRSSFQKSTIRRLINQFTGGANVNQSVVIAIAGLAKVF
VGEVVEEALDIRDLDEEAARNPLQPEHVRQAFLKLGEQGKLYPPIGPRSDGL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgcgaacgatttgtttggaggtctcagcgaaagcagtgggagcagtgacgag
gaggacgctatcactgatattgttcctccaaagaaccaggacgtgcttgctgatttagct
ctgagtgatgaagacgacgatctagacgatttgattgaaaaatcaccatcgccatcaaaa
agtggaccgtcatcagttgaattacaaccaccacaaccgctaccaacaaggcctccagtg
gttttttcactttccgacgacgaagactcaatggacatgccggatattcagcaaatgcaa
cggaatgcagctgcagcagccgccgccgctgctgccgaagctgcagaaaaagctgctgca
gttgcagaagctgctgcaaaagagaaagctgccgaggaagcgagattggctgaaattaag
gcagaacaagagaaagcggctgaaaaacggagacgattggaatacattgtcaaggtggag
ttaccaatgaaacaaccaagactggacgagggaccgtcgagttccagaccaggacctagt
catagccgcatccgtgatgacagcctttcgctggaaggtttcgagttcagcaaagccaac
gaagcaaaattccaagctctgatccaacgccatcaaacggaagccgacggcggtccacca
ccaccccgtccacgtgttcctcaacttccaccagtgccagaagacgaaaatgagattgca
cgtttgaagtcacaaattcttctgtccaacttctcacaagagcaactggagcgctatgaa
tcatatagaagatcttctttccaaaagtccaccattcgtcgtctgattaatcaattcacc
ggtggagccaacgtcaaccagagtgtcgtcatcgccatcgccggattggctaaagttttc
gttggagaagttgtcgaggaagcactggacattcgtgatttggatgaggaggctgccagg
aatccacttcaaccagaacatgttcgtcaggctttcctcaaactcggtgagcaagggaag
ctctatccaccaattggcccaagatccgatggactatga
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