Caenorhabditis briggsae (nematode): CBG_14390
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Entry
CBG_14390 CDS
T01054
Name
(RefSeq) Protein CBG14390
Organism
cbr
Caenorhabditis briggsae (nematode)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
Motif
Other DBs
NCBI-GeneID:
8586498
NCBI-ProteinID:
XP_002644502
WormBase:
CBG14390
UniProt:
A8XJW5
LinkDB
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Position
X
Genome browser
AA seq
2938 aa
AA seq
DB search
MILINKKVPETSTCRKRMHPGYQYMLPDCRLLLLRKWKLVHNISVSPIPLLYHLPFLLSC
TAPTIHCPENCICVCGCSTASVNWDNLDSREWPVNKVVINARYARLLVAAGFIMDSLSFD
ENEHQDILIAGLGGGVMSNFLSEISYLNITKNMIISLWTHLLEALNRFFRDWDQARNENN
LQRIRIYEIVVGVEQYQLRVDMINQQHNQGPPQQLLNVQRPQQIQPPTGQHRMVPQGQNQ
MPQQNQIQQGQHMQHGNMGQPPISNMQGQRQPGPSPQHLHHPQPGPSPQQMRVPSGQNLN
QPGPSPQHMQNQPGPSSQHVQQSSQSQGHIMNMGQQMRPQQGQQQPQPQMMQQQPVQQSP
QQQQIRPNPQQQHQMRPQQGQMQAQQHQQGHMQTQQHPQGQHHIQNQPQPQMRMQQQNQQ
SLQHMNTPPQQQRIMQNQNMQQSPIMQQGLQNNMQQSQGNMQQGQQNMQQTQGNMQQPQG
NLQQGHQNMQQPQGNMQQNQNMQQGMRMVSPHPQQGQRMMPQQQTQMQGGPQQMNRLSPQ
QPHHQVQMQQHGVQQQSGQHPMNGPSPQQPHQQIQHLQQSGQQQMNHASPQPPHHQIQTQ
QGPSQVIDTSPIQQQQNQTLPEGPIIRGNRIATKPYPDESNPVYEQGPSEDTTVRRRMPQ
SMSGAPPPKQMRMQQAQQPQQDSQMQQQGGGPIGMNSGGGPSQQHQSQPIRVVQAPQNQQ
NLQRQPPARQQMPLQQQIVRGPMQNSSQQGPMRMALLQGQGQGQQHQPQMQQQVPQQQVP
MHQQQVQHPAQIQQHQQHQQSPMHQQPPMHQQAPPMQQPQQQNMQNAMPQHNQPLPNGRP
IAPRPQQIQQQHHMQQQEVNDTNQPPVIHQQGSHHQRHLPQGAHQQQANQHGAQMGFQQD
ISQSDMPHQGSHQQDNQPPPLLQQQQPMQPQVIAQAQPNQEMPRVDEMVKVDTEQEIHIQ
GETAVINGVRYKLVQQDGETKLVALVSNPPSVSSQSSQPDQSNQQQRSSGSQQNQQQRNG
PQQYSQQGQQNQQNQQHQQSQQYQQSQNINTNQQGGQNHQMPMQQNMHNMNMQNQQQAPP
VLQQQQPPPPAPAPRKRNRAKKNNANTEPTVLQADTPVSEALKLMPSEMIQQNMPKFITP
PVKGNRKTNLSGGDPTTSSPPPPGQGSLQGLNGAVPQLPIPQRNMGPAMNQQHSRNGSRN
PPPMKQQTQRPNGMVQNKTVQLKQALPLKPVEEKENLTEIREAIILHCKGTQKMTPKYKA
YVIRELSRILVDLEALNLTWDRRYTAVQNLMVLIEDDPNVPFIKPTPREHRFIEKPKNDV
GPDPEGETEEEKEKRHSENIEKLVNAYPEPNFGVTFKGLDLAVINKEKEFYRKEDMKNRE
AYLRKNIDTFSKDKQMKAKIEYLGLGLRDFQAKLRAEVLSHTTLVPPTEFLINPYSIRRT
KAEYALELKQHPDRAALEKKRRATNMPFLHAVQKHARDFKEFHRRNLNNHRKVHKSMQQY
ISNEAKRVAREEQRVERMRIQKLIQEDEVGYRAMLDEKKDQRLVYLLEQTDEYIKSLCDL
LKQQQDSVNDGAPVKKTPQKEYEGLAEDEKAKTILEKARNEDDDYDEEAEVHVEDYYTTA
HGIREEIKEQHSMMGDGNPVLKLKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTIA
FITYLMQVKKNPGPYLVIVPLSTVPNWQNEFDKWAPSVHLIVFKGSKENRKSSEPIIKSG
KFNVLLTTFEYVIREKALLGKLRWKYMMIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITG
TPLQNKLPELWALLNFLLPSIFQSCASFEQWFNAPFQTSGEKVELTSEETMLIIRRLHKV
LRPFLLRRLKKKLNPSCLTRWSLLSSHMQKGLLLDGKTNTGSRSLMNTMVHLRKLCNHPF
LFENVEDSCKSFWKSQFISAKDLYRVSGKLELLDRILPKLQASGHRVLMFFQMTAMMTIV
EDYLAGGNIQYLRLDGSTKTDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVI
IFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILASARFKLNVDEKVIQAG
KFDNRSTGAERRQILENIIKADNEFAEDEDVPNDEEINDMISRSEDEFDMFQKMDEDRVE
ADKRRRAKPRLCGQDEIPKDILRAADETDYIEKAKEEGRVAYLEVMPGSRRARKEVDYST
DTMSDDKFLEKLFESDDDTSSKPEESQSTSATSETLKKADDAMFATPKPPTMTFKVPKLV
AKPGDIVKRRHSKSEGNSDDHKPKKFRQSSEGEGRNAEERSLKRTSDKISETPLAKSAVA
PKTIEIDDDDICIIDEVAPTKAPVVKPSVPSVDESPKLREEDYSTPKKKKRMDSDGGERS
SEKKKKKHRDRDEEGSSEKKKKRKEKHLADMDAPSKQHHKKHKDLADIPSISPPPYDDKK
HKKKEKDPESSKKSKDLEGLISKIKSQKPAPQEGDNQFASSSQPTEELPPLKLKLNFKMP
QPPTPSKPQSWDDLVVLDDGTSAITEPKLSLKFKLPSAEKSTPVKPITVDTNKEPKLKLK
FKIPTPEKISPEKADVAEPKLKLKVKVPKEKLETTPLEKETPLPKLKFKLPSMTSEKSST
DPVKQLALNLLNLKTPDASAGKPTSALPSSEKPKLSLKFKVHPSSTPEKPALDVTSDLPK
LSFKVNGPPGLTPEIPKLSLKIKPPTENSEVDVPAPELPKLKFKVAAPDAIVPTSEETPK
LSLKFRMPSFTPQLLAPSSDTPAKPADVPSTSETPKLSLKFKMPAFNPTAATEGLSTGSM
PSLKLKLPSFSEMKKPTSSTSESEHADVKEKKKKKEHKEHKEHKEHKRKSHEGETEEERR
ARKEAKRLKKEAEGDKDDDVKRQEKAAKKAAKKELKRLAKEQNATGGPTDVVLPNPTI
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgattaacaaaaaggttccagaaacatcaacttgtcggaaaagaatgcatccc
ggataccaatacatgcttcctgattgtcgactcttactacttagaaaatggaagttagta
cataacatctccgtatctccaattcctcttctctatcatctaccattcctcctctcgtgt
acagctcccacgattcattgccccgaaaactgcatatgtgtatgtgggtgttcaactgca
tcggtaaattgggataaccttgactccagagaatggcctgtgaacaaggttgtgattaat
gccagatacgcaagacttcttgtagctgccggattcatcatggacagcctatcttttgat
gagaatgaacaccaggatattcttattgccggccttgggggtggagtaatgagcaacttc
ttgtcggaaatttcgtatctaaatataacaaaaaatatgatcatatcattgtggacgcat
ttactcgaggcgttgaaccgattctttcgagattgggaccaagcccgtaacgagaacaat
cttcaacgaatacggatctacgaaattgtagttggcgtcgaacagtatcagttgagggtt
gatatgataaatcagcaacacaaccaaggtccaccacaacaactgttaaatgtccaacga
ccgcaacagattcagccgcctacgggccaacataggatggtgccacagggacaaaatcag
atgccccaacagaaccaaattcaacaaggccaacatatgcaacatggtaatatgggccaa
ccaccaatatccaatatgcagggacaacggcagccgggaccatcaccacaacaccttcac
catccacaacctggaccgtctccccagcaaatgcgagtaccaagtggtcagaacttaaat
cagccgggaccatctccacaacatatgcaaaatcagccaggcccatcttcccaacatgtc
caacagagtagccaatcccaggggcatataatgaacatgggacagcaaatgcgtccccag
caaggccaacaacaaccccaacctcaaatgatgcagcaacagccggtccaacagtcacca
cagcaacagcaaataaggccgaatcctcagcagcaacatcagatgagacctcaacaggga
caaatgcaagctcaacagcaccagcagggacatatgcagactcagcaacatccacaagga
cagcatcacattcagaatcagccacaaccccaaatgagaatgcagcaacaaaaccaacaa
tctctgcagcatatgaatacgccgccacaacagcagaggatcatgcagaatcaaaatatg
cagcaaagtccaattatgcagcaagggctacaaaacaatatgcagcagtcacagggcaat
atgcaacaaggccaacaaaacatgcagcagacccaaggaaatatgcagcaaccacagggc
aacctgcagcaagggcatcagaacatgcagcaaccccaaggcaacatgcagcaaaatcaa
aacatgcaacaagggatgagaatggtttcgccgcaccctcagcagggacaaaggatgatg
ccgcagcagcaaactcagatgcaaggtggacctcaacagatgaaccgactgtctccacaa
caaccgcatcaccaagttcagatgcaacagcatggtgtgcaacaacagagtggacagcat
ccaatgaatggaccatctccccagcagccacatcaacagattcagcatctgcagcagagt
ggccaacaacagatgaaccacgcttctccacagccgccacatcaccagattcaaactcaa
caaggaccctctcaagtcatcgacacctctcccatacaacagcaacaaaaccaaacgctg
cccgaaggacctatcatcagaggcaatcgcattgctacaaaaccctatccggatgaatca
aatccggtatatgaacaaggtccatctgaagacacaacggtgaggagacggatgcctcaa
agtatgagcggagccccaccaccaaaacaaatgcgcatgcaacaagcacaacaaccacaa
caagattcgcagatgcagcaacaaggcggtggaccaattgggatgaatagtggtggagga
ccttcacaacagcatcaatcgcaaccaattcgagttgttcaggcacctcaaaaccagcag
aatctgcaacgacagccaccggctagacaacagatgcctctacagcagcaaattgtgcgt
ggaccaatgcaaaactcttcgcagcaaggtcccatgcggatggcacttcttcaggggcaa
gggcaagggcagcagcatcagccgcaaatgcagcagcaagtaccacagcaacaagtccca
atgcatcaacaacaggtgcaacatcctgcacagatacaacagcaccaacagcatcaacag
tctccgatgcaccagcaacctcccatgcaccaacaagctccgcctatgcagcagccgcag
cagcaaaacatgcagaatgcaatgccacaacacaaccaaccactcccaaacggtcgaccg
atagctccaaggccacaacagattcaacagcagcatcacatgcaacaacaggaagtgaac
gacacgaaccaaccgccagtcatccatcagcagggaagtcatcatcagagacatcttcca
caaggagctcaccagcagcaagcgaatcagcacggagctcagatggggtttcagcaagat
ataagccaatcggatatgccacatcaaggcagtcatcagcaggataaccaacctcctcca
ctactgcaacaacaacaaccgatgcagccacaggtgattgcacaagctcagccgaatcaa
gaaatgccgagagtcgacgagatggtcaaagttgacaccgaacaagagattcatatccaa
ggagagactgctgtgatcaacggtgttcggtataaattggttcagcaagacggagaaact
aagctcgtcgcattagtctctaatccgccaagcgtttcgagtcagtcgagtcaaccggac
cagtcgaatcaacagcaacggagttctggtagtcaacagaaccaacagcagcgaaatgga
ccccaacaatatagtcagcaaggccagcaaaaccagcagaaccagcaacaccaacagagc
cagcaataccaacagagccagaacatcaatacgaaccaacagggaggccaaaaccatcaa
atgccgatgcaacaaaatatgcataatatgaatatgcagaatcagcaacaggctccacct
gtcctccaacaacagcaaccacctcctccagctccggctcctaggaaaagaaaccgagct
aagaagaacaacgcaaatacggaaccgactgtgctgcaggctgacacccctgtctctgaa
gctttgaaattgatgccaagtgagatgattcagcagaatatgcccaaatttatcacacct
ccagtgaaaggtaatcgcaagaccaatctatcaggtggggatccaactaccagttcccca
cctccacctggccaaggatctttgcaaggtctaaacggagctgttccacaactaccgatt
ccgcagagaaatatgggtccagctatgaatcaacagcattcaaggaacggttctcgaaat
ccaccaccaatgaagcaacaaacccagaggcctaacggaatggttcaaaataaaactgtt
caattgaagcaagctctaccactaaaaccagtcgaggaaaaagagaatctgactgaaatc
cgagaagcaatcattttacattgcaagggaacacaaaaaatgactccgaagtacaaagcc
tacgtgattcgtgagctcagtcgaattctagtggatttggaagcgttgaatttgacatgg
gaccgtcgatacactgctgtacaaaatttgatggttttgattgaagacgatccaaatgtt
cctttcattaaaccgactcctcgtgagcatcgatttattgaaaaaccaaaaaatgatgtt
ggaccggatccggaaggagaaactgaagaggaaaaagagaaacgacacagtgaaaacatt
gagaagttggtgaacgcgtatccggagccaaatttcggtgtgactttcaaaggactcgat
ctggcagtgatcaacaaggagaaagaattctaccgcaaagaagacatgaagaatcgtgaa
gcctacttgagaaagaatattgacaccttttcaaaggacaaacagatgaaagccaaaatc
gagtatctgggattgggcctccgtgatttccaagccaaactccgtgctgaagtgttgtca
catacaactcttgtgccaccaaccgagttcctcatcaatccttactccatccgaagaact
aaagctgaatacgcattggaactcaaacaacatccggatcgtgcagcattggaaaagaaa
cgaagagccaccaacatgccattcctacatgcagttcaaaaacacgccagagatttcaaa
gaattccatagaagaaatttgaataatcacagaaaggtgcacaaatcaatgcaacagtac
atttcaaacgaggcaaaacgagtggcacgagaggaacaaagggttgaaagaatgagaatt
caaaagctgattcaagaggatgaagttggttatcgtgccatgttggatgaaaagaaagat
cagcgtttggtgtatcttcttgaacaaaccgatgagtacatcaaaagtttgtgtgacttg
ctgaaacaacaacaggattcggtcaacgatggtgctccagtcaagaaaactccacaaaaa
gagtatgaaggacttgccgaggatgaaaaggccaaaactatattggagaaggcccggaat
gaagacgatgactatgatgaggaggctgaagttcacgtcgaggactactacacaacagcg
cacggaatccgtgaggagatcaaggaacagcactcaatgatgggagatgggaacccagtg
ctcaagctgaaaccgtatcaaattaaaggtctcgagtggatggtctcgctttacaacaac
aatctcaacgggattcttgccgatgagatgggtctaggaaaaacgattcagaccatcgca
ttcatcacctacttgatgcaagttaaaaagaatccaggaccataccttgtaatcgttccg
ctctccactgttccgaattggcagaatgagtttgacaaatgggcgcccagtgttcacctc
atcgtgttcaagggatcaaaagaaaaccgaaaaagcagcgaaccaattatcaagtctgga
aaattcaatgtgcttctgactactttcgagtacgtcatcagagagaaggctcttcttgga
aagctccgctggaaatacatgatgatcgacgaaggtcatcgattgaaaaaccagcactgc
aaactcactgaaatgcttaacacacggtttcagtgtcagagacgattgctgatcactggt
actcctcttcagaacaagttacccgagctgtgggctcttcttaatttcctacttccatcc
attttccaatcatgcgccagttttgagcaatggttcaatgccccattccaaacatccggg
gagaaggttgaattgacgtctgaagagaccatgcttatcattcgacgccttcacaaagtt
ctccgaccatttttgttgagaagactcaaaaagaagttgaatccgagttgcctgacaaga
tggagtttgttatcaagtcatatgcaaaagggtcttcttctggacgggaagaccaatact
ggaagtcgttcattgatgaacaccatggtgcacctccgtaaattgtgtaatcatccgttc
ctttttgagaatgtggaggattcctgcaagagtttctggaagtcacaattcatctcagca
aaagacttgtaccgagtttccggcaaactggaattattggatcgcatccttccaaaactt
caagcaagtggtcaccgtgtcctaatgttcttccaaatgacggctatgatgactattgtc
gaagactacctggctggtggcaacatccaatacctccgcttagatggtagcaccaaaaca
gatgaacgaggagcacttctggacaagtttaatgctccgaacagcgaatacttcttgttc
atgctttccacccgtgctggaggccttggattgaatcttcaaaccgcggatactgtaatc
atttttgactctgactggaaccctcatcaggatatgcaagcacaggaccgtgctcatcgt
attggacagaaggcggaagtcagagttttccgtttaattactgccaactctgtggaagaa
aagatcttggcctctgctagatttaagctgaatgtggatgaaaaagttattcaagctgga
aagtttgataaccggtctacaggtgcagaacgcagacagattctggagaatattatcaag
gctgacaacgaatttgctgaagatgaagatgtccccaacgacgaagagatcaatgatatg
atctcaagatcagaggatgaattcgacatgttccagaaaatggatgaagatcgagtggag
gcggacaagcgcagaagagcaaagcctcgtttgtgtggtcaggacgaaattccaaaggac
attcttcgcgctgccgatgagaccgactacattgagaaggccaaagaggagggccgtgtt
gcttacctggaagtcatgcctgggtccagaagggcgagaaaagaggtcgactactctacc
gacacaatgtccgatgataagttccttgagaaactgtttgaaagtgacgatgacacatca
tccaaaccagaagagagccagtcgacttctgcgacatctgaaacactgaaaaaggctgat
gacgctatgttcgctactccgaaaccaccaaccatgacgttcaaggtacctaaattggtg
gctaaaccaggagacatcgtgaaacgacgtcactcaaagagcgagggaaattcggatgac
cataaaccaaagaagtttcgacaatccagtgaaggtgaaggtagaaacgctgaggagaga
agtctcaagcgtaccagtgacaaaatatcagaaacacctcttgccaagtcggctgtggca
ccaaaaaccattgaaatcgacgacgatgacatctgtatcatcgacgaggttgcaccaaca
aaggctccggttgtgaagccttcagttccttctgtggatgagtctccaaagctgagggaa
gaggattattcgactccaaagaaaaagaagcgcatggatagtgacggtggggaaagatct
agcgagaaaaagaaaaagaagcatcgtgatcgagatgaagaaggctcgagcgagaagaag
aagaaacggaaagagaagcatcttgcggatatggatgctccatcgaaacaacatcacaag
aagcacaaagacctcgctgatataccttccatttcacccccgccttacgatgacaagaaa
cacaagaagaaggaaaaagatcccgaatcttcaaagaaatcgaaagacctcgaaggattg
attagcaaaattaaatctcaaaaacctgctccccaagaaggtgacaaccaatttgcttcc
tcatcgcaaccaacagaggaacttccgcctcttaagctcaagcttaacttcaaaatgcca
caaccaccaactccttcaaaacctcaatcatgggacgatctagttgttctagatgatggt
acttctgcaataactgagccaaaactcagtttgaaattcaaacttccttctgctgaaaaa
tctacgccagtgaaaccaatcaccgttgatacaaacaaggaaccaaagctcaagctcaag
ttcaagattcccaccccagagaaaatttcaccagaaaaagctgatgtcgccgaaccgaag
ttgaagttgaaggtcaaagtgccaaaggagaagttagagactacgccattggaaaaagag
acgcctctgcccaagctgaagttcaaacttccttcgatgacttcagaaaagtcttcaacg
gacccggttaagcaattagcactgaatcttctcaacttgaagactcccgatgcatctgca
ggaaagccaacatctgctctgccatcttcagaaaagccgaagctgagcttgaaattcaaa
gttcatccatcttcaactccagagaaacctgctttagatgttacctcggatttaccgaaa
ttgagcttcaaagtcaatggcccaccaggactaactccagagattccaaagttgagtctc
aaaatcaagcctccaactgaaaattctgaagttgatgttcctgctccagaactaccaaag
ttgaaattcaaggttgctgccccagacgcaattgttccaacttctgaagaaacaccgaag
ctgagtcttaaattcagaatgccctctttcactccgcagttgctcgcaccatccagcgac
acaccagccaagccagcagatgtgccatctacttctgaaacaccgaagctgagcctcaaa
ttcaagatgcccgctttcaatcctactgctgccactgaaggtttgagcacaggatctatg
ccaagtctcaaactgaaactaccctccttctcggaaatgaagaaaccaacatcttctaca
tcggagtcggaacatgcagacgtcaaggaaaagaagaagaaaaaagagcataaggagcac
aaagagcacaaggagcacaagagaaagtcccatgaaggtgaaactgaagaggaacgtcgt
gcacggaaggaagcaaagcgtctgaagaaagaggccgaaggagacaaagatgatgatgtg
aagcgacaagagaaagctgccaagaaagctgctaaaaaagagctgaaacgtcttgccaag
gagcagaacgccactggagggccaactgatgttgtcctgccaaatccaactatctaa
DBGET
integrated database retrieval system