Caenorhabditis briggsae (nematode): CBG_15138
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Entry
CBG_15138 CDS
T01054
Name
(RefSeq) Protein CBG15138
KO
K21123
serine/arginine-rich splicing factor 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_15138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_15138
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
SR proteins
CBG_15138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
8584861
NCBI-ProteinID:
XP_045095671
WormBase:
CBG15138
UniProt:
A8XLV2
LinkDB
All DBs
Position
III:<680549..>682106
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AA seq
300 aa
AA seq
DB search
MLLPETDEVLDTVFVGNLPFKTKESQVEDMFQQYGFIRNIKIKREFGCAIAFVQFRESSD
ADFAVYGVNNAVVGNFRVYTDLTTGFVEPWSYSYDAFEIPKESKLRPLKFLVIVDNLPSS
ASWQDVKDHMRDTHGIKSTNVDFKTDRAYVEFEDQRGAEYAVKRYHQSLFRSHRGETRYI
NVRLGTPNPHKFADNIKNRSFTRQRSMSPIRRSSGGRDLKRVAFRDERRSVSCKRPREHN
RSPIRRRPSLEDSPIRRSSTDETDDSRRSTRSKYRKESSSPSVSRSPSPESSDSSNVDIK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccggaaactgacgaagttctggacaccgtattcgtggggaatttgccgttt
aaaacgaaagaaagtcaggtggaagacatgtttcagcagtacggattcattcgaaatata
aagattaaacgcgaattcgggtgtgcaatcgcttttgttcagtttagagagagcagcgac
gccgatttcgcagtctacggtgtcaacaacgcggttgttggcaatttccgtgtctacacc
gacctgacgacaggattcgtcgagccatggagttactcatacgacgcgtttgaaattccc
aaagaatcgaagctccgcccattgaaattcctcgtgattgtcgataatcttccatcgagt
gcatcatggcaagatgttaaagatcatatgagagacactcatggtattaaatcgacaaat
gtggattttaaaaccgaccgagcttatgtggagtttgaagatcaaagaggcgcggaatat
gctgtcaaaagatatcatcaatcgcttttccgatcgcatagaggagaaactagatacata
aatgttcgtcttggcacgccgaacccacacaaatttgcggataatatcaaaaatcgatca
tttactcgtcagcgatcgatgtcaccgattcgtagaagttcgggtggaagagacttgaag
agagttgcatttagggatgagagaagatccgtctcctgcaaacgcccccgtgaacacaat
cgttctccgatccgtcgtcgcccctctctagaagattctccgatccgccgatcgtccact
gatgaaaccgatgactcgcgccgatcaactcgtagcaaataccgaaaggaatcgtcgagc
ccatctgtcagccgttccccatctccagaaagttccgattcgagtaatgtggatattaaa
taa
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