Caenorhabditis briggsae (nematode): CBG_15177
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Entry
CBG_15177 CDS
T01054
Symbol
Cbr-zer-1
Name
(RefSeq) Protein CBR-ZER-1
KO
K10350
Zyg-11 protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_15177 (Cbr-zer-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
CBG_15177 (Cbr-zer-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
Motif
Other DBs
NCBI-GeneID:
8584896
NCBI-ProteinID:
XP_045095651
WormBase:
CBG15177
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Position
III:491130..496236
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AA seq
909 aa
AA seq
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MSHTADVPLEAPTMIRLASAAVMTQLENDEFMETVVLPTPLSEELFGRFRDKWNYYNQHG
AQHVERLGPPDGQERVDQGNLDMIRQVFRVWSDSTRLPLQKLDLTGATIDDQIFVDLLHA
HAPNITELDLTNVTGVTDLANAYLYARSTNFPTLTSIRMTSMELVTGHQPRRKNGIATTE
FRSLFMLGEEALAEARGPIERDGIRSPLSPSSMDIQEEEDMLIHEQPVNPPLITARAPNV
RRLFLPRTPNKRSTIDEEEQNTHVILSKILSPLQKLEVLDLSYWSKTDDMRCLMPLSNTL
TCLVLYEVPDLYHAIPSICQMTELQVLDISQSNKDTGTYPNPVTTLNKIIVSLKKLTHLD
ISSTNLATQPSSHDNPARYRESVRTDICGLQSLVKPLKYLGLFNCESASHVREIPAEVVS
GDANEDQVITSLKMYKDRAGLLQNVLNESYQLYRFGNSNPLTRHTEALHLVLEAMHRHLA
DSTLQIAGSASLFYIIRKVDMNRDTKRRVVSALLSGMEVHMEEQVMVRNCCLSLCQFEIP
QDILFDYSRLAVLLVSVLQHHNADNLTQRIVVFLLNSMACHVEGDQKVQVGSYGAIEMIL
DQISRKHTANICDDVMEVGWSFLWNITDETPVNCELFLNANGLDLFQKCYEAFKTERELV
RNMMGLIGNIAEVDALRSQLMKDDYVNIFCALLTSQEESIEISYNSAGVLAHMVSDGEEV
WEKLTVCRQEVMRKIVEATSTWKLATRRFINYRSFRPILRLLPLYHAYASQHWAVWALAN
LTTTDGEKWVLRIFFHSKKFFINIFSRYCAYVRDEGGVPLLQELVSNPITTQDIRHLANT
VLDNIRAVEMKRINPNWRPDAHPTTTSPVFRPSYVSDVEEEEEGEAMEEEQQEDYINVDF
DDVAVPMEY
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatacggcggatgttccgctggaagcgccaacgatgattcggctcgcatcggcg
gcggtaatgacgcaactcgagaatgatgaattcatggagaccgtcgtgcttccgacgccg
ctcagcgaggagctattcggccgatttcgtgacaaatggaattattataatcagcatggc
gctcaacacgtggagcgtttaggaccgcctgatggtcaggagagagtcgatcaggggaat
ttggatatgatccgacaagtgttcagagtttggtcagattctacaagattgccgctgcag
aaactggatttgacaggagcgacgatcgatgaccaaatattcgtcgacctccttcatgct
cacgcccccaacatcacagaactcgacctgacgaatgttacaggtgttaccgatctcgca
aacgcttatctctacgcaagaagcacaaatttcccaacgctcacatcgattcgaatgaca
tctatggagctggtgaccggacatcaacctagaaggaaaaacggaatcgcaacaacagaa
ttccgttctctgttcatgttgggagaagaagctctcgctgaggctcgtggtcctatcgag
cgtgacggcatccgttccccactatcccctagctccatggacattcaggaggaagaggat
atgctgatacacgagcaaccagtgaaccctccgcttataaccgcacgcgcacccaacgtc
cgtcgtttgttcctaccacgaacaccaaataaacgaagtacgattgacgaggaagagcag
aatactcatgtcattttaagcaaaattttatcaccacttcaaaaactcgaagttctggat
ttatcgtattggagcaaaactgatgatatgcgatgtttgatgccattgtcaaacacgttg
acctgcttagtcctctacgaagtgccagatctctatcatgcgattccaagtatttgtcag
atgacagaacttcaagttttggatatatcccagtctaataaggacacaggaacctatcca
aatccagtgacgactcttaataaaatcattgtaagcctcaaaaagctgactcatctggat
atctcatcaaccaacttggcgacccaaccatcatcccatgacaatccagcgaggtaccgg
gaatcagttcgaaccgatatttgcggtcttcaatcactagtcaaaccattgaaatatttg
ggattattcaattgtgaaagtgccagtcatgttcgggagattcccgcggaagttgtatcg
ggagacgctaacgaggatcaagttatcacatcgttgaaaatgtacaaagatcgtgctggt
ctactgcagaatgtgttgaacgagagctatcaattgtacagatttgggaatagcaatccg
ttgacccgccacaccgaagcactccatctggtcctggaagccatgcaccgacacctggca
gacagcactctccaaatcgccggatccgcctcccttttctacatcatcagaaaagtcgac
atgaatcgagacacgaaacgacgtgtggtgtcggcgttgctcagcggaatggaagtacat
atggaggagcaggtgatggtccgaaattgctgtctctcgttgtgccaatttgaaattcca
caggatatattgtttgattatagccgccttgccgtcctcctcgtctctgtccttcaacac
cataacgctgacaatttgacacagagaatcgtggtattcttgttgaattcgatggcgtgc
cacgtggaaggagatcagaaggtgcaagtgggaagctacggtgctattgagatgatcctg
gaccaaatcagtcgaaaacacacggccaacatttgtgacgatgtgatggaagttggatgg
agttttctatggaatatcactgacgaaacgccagtcaactgtgaactgttcctcaacgca
aatggcttggatctattccaaaagtgttatgaagcttttaaaactgaacgagaactcgtt
cgaaacatgatgggactcattggaaacattgctgaggttgatgcgttgagaagtcagctc
atgaaggatgactatgtgaatatattctgcgcattgctcacttctcaagaggaatccatc
gagattagctataattctgctggagtgcttgctcatatggtcagcgatggagaagaggtt
tgggagaagctgacagtgtgcagacaggaggtaatgaggaagattgtggaggcaacatcc
acgtggaagctggctactcgtcgattcataaactatcgatcgttccgtccgattcttcga
ctgctgcccttgtatcatgcctacgctagtcagcattgggccgtatgggctttggctaac
ttgacgactaccgatggagaaaagtgggttttaagaattttttttcattcgaaaaaattt
ttcataaatattttttccagatactgtgcctatgtccgtgacgagggaggtgtcccattg
ttacaagaactggtttccaacccaattacgactcaagacattcgccatcttgccaataca
gtactcgataatatacgggcggtggagatgaaacgaatcaatccgaattggcgtcccgat
gctcaccccacgacaacgtctccagtgttcagacccagctacgtgtcagatgtggaagag
gaggaagagggagaggcgatggaggaggagcaacaggaggactacataaatgtcgatttc
gacgacgtcgctgttcccatggagtactga
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