Caenorhabditis briggsae (nematode): CBG_15188
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Entry
CBG_15188 CDS
T01054
Symbol
Cbr-smi-1
Name
(RefSeq) Protein CBR-SMI-1
KO
K13130
gem associated protein 2
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_15188 (Cbr-smi-1)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
CBG_15188 (Cbr-smi-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIP1
Med7
Motif
Other DBs
NCBI-GeneID:
8584906
NCBI-ProteinID:
XP_002642913
WormBase:
CBG15188
UniProt:
A0AAE9IMV2
A8XLQ7
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Position
III:complement(452497..453876)
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AA seq
256 aa
AA seq
DB search
MDQEACLDLDDDAMDLDDVDPTAPAMSAAAYFRQVKAERRQTADVVRIQNSQQNAPESTK
KKQQQWLESVGFQKEDGAKNETSSLVPSVEWRAEKCRQFGDFREILAEKIAKTQPMKIKQ
LAAPSDDEWHEILLEKCLPEFQETCGNFKNHTGTPPSVLMVLAIPKRHLSQLIENLVEWS
SEEGLSRPIREWIYALLLVIDLPLVQDVIAALRTLAKDCRKLRSRLPADRKAEANEYSMF
IAIIGTFFGQKDLADI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaagcgtgtctagacctcgacgacgatgcgatggatttagatgacgtggat
cctaccgctcctgcaatgtcagcggccgcctatttcagacaagtgaaggcggaacgacga
cagacggctgacgtcgtcagaattcagaattcacaacagaatgctccggaatcaacgaag
aagaagcagcaacaatggctggagagtgttgggtttcagaaggaggacggtgctaagaat
gagacgtcgtcactagtcccatctgtcgaatggcgtgccgaaaaatgccgtcaattcgga
gactttcgagaaattctagctgaaaaaatcgcaaaaacccaaccgatgaaaatcaagcag
ctggcggcgccttctgacgacgagtggcacgagattcttctggagaagtgtcttccagaa
tttcaggaaacttgcgggaatttcaagaatcacactggcacaccgccaagtgtactaatg
gtgttggcgattcccaagagacatctaagtcaattaatcgaaaatctcgtcgaatggtct
tccgaagagggtctaagtcgtccgattcgtgaatggatctatgcacttttattggttatc
gatttgccgttggttcaggatgtgatagcagcgttgaggacgttggccaaggattgcaga
aaacttcgctctcgactaccagcagatcgaaaagctgaagcaaacgagtactcgatgttc
atcgcgatcattggcacattcttcgggcagaaggatctggcggatatttga
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