Caenorhabditis briggsae (nematode): CBG_15212
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Entry
CBG_15212 CDS
T01054
Symbol
Cbr-let-765
Name
(RefSeq) Protein CBR-LET-765
KO
K26273
protein strawberry notch
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_15212 (Cbr-let-765)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CBG_15212 (Cbr-let-765)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
8584928
NCBI-ProteinID:
XP_002642935
WormBase:
CBG15212
LinkDB
All DBs
Position
III:<320835..>327813
Genome browser
AA seq
1839 aa
AA seq
DB search
MDDILSAALTEAGLEEFLCAPSPVPSTSGSAHDEAVVTQSAPPTSYPTSSSSSTNNHFFD
DSHSNDSAHSATTYYNTPLNTPFVSAEDGGAPTSFFGMDEEDGGCTITPARSQSLEEPLY
YPQVQVIPRKQLPPEPKNEEPPSTPPEEDHPTSSEISDPKVIKEEPESTPSTSTAVSSRV
VSSLASQRSHTGSPVTSEGITAPLTRKSLPVTPGSIVKRTVQTKDGLQTQYLKAVVNENG
EKIYRLLSPVAASAVAARGAMARSSTGPQSVRVGNTIVNKNGERLMVVRNQTGPNGQLLV
KRIVTNGTRGTGGIPGSRMIASGGHGREQVYRALSGSGGHLIRRTVPGGQAQRGGMVVRH
AVRGTYGGGNGVSAPGYRVNLVGRGGSTMVHHQPLNRVVARGAIQTSGGRIVSRGALRPQ
PLHVSNSTPSFQYMEENPGNSGSFQQAKTPGAGVIQARHMQQQQYQVGQHQNRMVLNRSS
TNAGISRMVGGYDPQQLPQVAPNGRLIIPTNSVMRGIPGPSGMPSPRIPVTPQPQTKSQK
AKDEMRMAYQVGRDEALQQRKNDLEDDEENLGYAETYSEYTPAKLRSGMAHPDSVVESAS
LSSVSPPDVKYQISIPEYLIDMGHISALQLEAVIYACQMHERRMPSGERYGYLIGDGAGV
GKGRTVACIIFENYLQGRKRAIWLSVSSDLKFDAERDLRDCGAPNIPVYALNKMKYAKIS
GKENGSIKKGVMFATYTSLIGECRGAKSRKYRSRISQLIQWFGQDYDGVIILDECHRAKN
LVPTAGAKPTKTGRMVLELQKALPNARVVYASATGATEPRNMAYMTRLGLWGERQAFPEF
HDFISAVERRGVGAMEIVAMDMKQRGLYLARQLSFRGVSFAVQEVQLSSDFVKMYDAAVK
LWMEARRQFQTVIETMDEEERSTCKTIWGQFWACHQRFFKYLCIAAKVDTCVQLSREAIK
AKKCVVIGLQSTGESATLETLEEMGGELNEFVSTAKTVLYGLIDKHFPTDTSLSMGDRDI
FKDFDDFDRPAKRRKTRETLSFLGDVGFDTWTGVTTGMGGQVGEGGKSLKFGSIGRPGTS
KVGQDEANSTTSESSGDESGDNSASEFEDDKNGDLASAREEAEGARTLEDGEEDEWVKAL
LAEAESSSDEDSDEAEDVKEDAEDEEEEGEQQVKREPDEEFNPFMCDFSRGDPWANMQQI
VEDTPVKERKTKKRKRDEEEAERMREKVRKREERREKKRRRAIRKAEREKRRRNEELQAR
GSATDFITSSRICGSSGEKEDINPLLIKTELLAAVERLAPSLPANTLDQLIDEMGGPEYV
AEMTGRRGHMVTTETGDVMYQRRNANAEVSLELINMEEKEKFMRGEKLIAIISEAASSGI
SLQSDRRAMNKRRRVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFA
SIVAKRLESLGALTHGDRRATETRDLSQFNMDNKYGRVALDTLLKTVIGQAGVPLIEPPK
DYKAGDFFEDMRLYMEGVGLLAKNKNGQYTIEKEAATIPKFLNRILGLPVHAQNSLFHYF
SEIVAELIAQSKHDGTYDTGIMDLGTGDDQVRKLETRVFTGRVDNGSFRVEMHKIGVERG
VSWDEAMELFKEHSNDDDGFYLCHPGGANTANTKKVAALVYGIGKIRMDNGARLYAITRP
STGRSPKLMTMADLSKRFSKVTVDEAKEVWKQQYDSAANMCQHNYIYSKCRTESNGTYCE
VGRRTRTYFVLSGSVLSVWPIVEEVLAGSDRKSSRMQVIRVRTDHDQKIVGKLGINRHTD
RGKQLSLSVICLLVLPSHVRNLVTQLETHCGRSYVKTEP
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggacgatattctgtcagcagcgttaaccgaggcgggtctcgaagagtttctatgcgca
ccgtcaccagtaccgagcacttctggaagcgctcacgatgaagcggtagtcacacaaagc
gctccacccacatcatatccaacctcctcctcctcatccacgaataatcactttttcgac
gattcgcattcgaatgactccgcccactcggcgacgacctattataacactccgctgaat
acaccgttcgtttctgcagaagatggcggtgctccgacgtcgtttttcggaatggacgag
gaggacggagggtgtacgattacgccggcaagaagtcaaagtttagaggagccgttgtat
tatccgcaagttcaggtgatccctcgaaaacaactgcctccggaacccaaaaatgaagag
ccaccatcaacgcctcctgaagaggatcatccaacgtcatctgaaatttcagatccaaaa
gtgataaaagaagaaccagaaagtactccatccacatcaactgcagtatcttcacgtgtt
gtttcttcgctggcttctcaacgatctcacacagggtctccagtcacatcagaagggatt
actgcaccactaaccagaaagagcttgccagtgacacctggttcaattgtgaaacgaact
gtacagacaaaggatggactgcagacgcagtatttgaaggctgtggtgaacgagaatggc
gaaaaaatctatcgattgctgagccccgtcgctgcttccgctgtggctgctcgcggagca
atggccagatcatcaacaggtccacaatcggttcgtgtcggtaacaccatagtaaataag
aacggagagcgtttgatggtagtgaggaatcaaaccggacctaatggacaactactagtc
aagaggatcgtcacaaacgggacacgaggcacaggcggaattccaggatccagaatgata
gccagtggaggtcacggaagggagcaggtgtatagagcgcttagcggatccggaggccac
ttgatccgtcgaacagtgccaggaggacaagctcagagaggtggaatggtcgtcaggcat
gcagttcgagggacatacggaggtgggaatggtgtatctgcgcctggatatcgtgtaaat
cttgttggacgtggcggatccacaatggtacaccatcaaccgctgaaccgggtggtcgct
cgaggagccattcagacgtctggaggccgaattgtgtcacgtggcgctttgagaccgcag
ccattgcatgtgtcgaattccacgccgtcttttcagtacatggaagagaatcctggaaat
tctggaagtttccagcaggcaaagacacctggtgcaggggttatccaggctagacacatg
cagcaacaacaatatcaagttggtcaacatcagaatcgaatggttttgaatagatcatct
accaacgctggaatctctcgaatggtcggtgggtacgatccacaacaacttccgcaagtc
gcgccgaacggacgtctaatcattccgacgaattctgtgatgcgtggaattccaggacca
tcagggatgccgtcacctagaattccagtcactccacagccacaaaccaagtcgcagaag
gccaaggatgagatgaggatggcgtatcaagtgggaagagatgaggctttgcagcagaga
aagaatgatttggaggatgatgaagagaaccttggctatgcagaaacctattccgagtac
accccagcaaaacttcgttccggaatggcccatcctgacagtgtcgttgaatccgcatcc
ctctccagtgtctccccgccagacgtcaaatatcaaatctcgattcccgagtatttgatc
gatatgggacacatctctgcacttcagttagaagctgtcatttatgcctgtcagatgcac
gagcgacgaatgccttcaggagagagatatggatatttaattggtgatggtgctggtgtt
ggaaagggtcgaacggtggcttgtatcatttttgagaactatttgcagggtcgtaaacgc
gcgatctggctctctgtctcctctgatctcaaattcgatgctgaacgagacctccgtgat
tgtggtgctccaaatatcccagtttacgctttaaacaagatgaaatatgctaaaatttcc
ggaaaagaaaatgggtccatcaagaaaggagtcatgtttgccacgtacacatcgctgatt
ggagagtgtcgaggagcaaaatctcgcaaataccgtagtcgtatcagccaactgatccaa
tggttcggtcaggattacgatggagttatcattcttgatgagtgccatcgagccaaaaat
ctggtgccaaccgccggagcaaagccaacaaaaacaggaagaatggttctagaacttcag
aaggctcttccaaatgctcgtgttgtgtatgctagtgctactggagctactgagccccga
aatatggcctatatgactcgtttgggactatggggagagcgtcaggcgtttccagagttt
cacgattttatctctgccgttgagcgacgaggtgtcggagctatggagatcgtggcgatg
gatatgaagcagagaggtctctatttggcgcgtcagttgtcttttcgaggagtctcgttt
gcggttcaggaggttcagttgtcgagtgacttcgtgaagatgtacgatgcggcggtgaag
ttgtggatggaggcgagaaggcagtttcagactgtaatagaaaccatggatgaagaagag
cgatccacctgcaaaacgatttggggacaattctgggcttgtcatcagcgattcttcaaa
tatctttgtattgccgccaaagttgacacctgtgttcaactatccagagaagctatcaag
gccaaaaaatgcgtcgtaattggtcttcaatccaccggagaatcagcaacattggagacg
ttggaggagatgggcggagaactgaatgagttcgtttctactgccaagactgttctctat
ggcttgattgataagcattttccaacggacacatcgctttcgatgggtgatcgagacatt
ttcaaagatttcgatgactttgatagacctgctaagcggagaaaaactcgagagactctt
agcttccttggagatgttggattcgacacgtggactggtgtgacgactggaatgggtgga
caagtcggagaaggtggcaaaagtctgaagtttggatccattggtagacctggaacatcg
aaagtaggacaagacgaggctaattcgacaacatcggaaagttctggagacgaatctgga
gacaattctgcatccgaatttgaggatgataaaaatggagaccttgccagcgcgagagaa
gaagcagagggagctcgtaccttggaagatggagaggaggatgaatgggtgaaggcgttg
ttggcagaagcagaatcatcaagtgacgaggattcagatgaagctgaagacgtgaaagag
gatgcagaagacgaggaggaggaaggagagcagcaggtgaaacgagagccagacgaggag
tttaatccgttcatgtgtgatttttcgagaggagatccgtgggcgaacatgcagcaaatc
gtggaagacacgcctgtcaaagaacgaaagacgaagaaacgaaaacgcgacgaggaagaa
gctgaaagaatgagagagaaggttcggaaacgagaagagcgtcgtgagaagaaacgtcgt
cgtgcgattcggaaggctgaaagagagaagagacgcagaaacgaggaactccaagctcga
ggatccgctacagacttcatcacgtcttctagaatatgtgggtcttctggagaaaaagag
gatatcaatccattgctcatcaaaaccgagctacttgccgctgtagaaagattagcacct
tcgctcccagcgaataccttggatcagttgatcgatgagatgggcggccctgaatatgtt
gcagaaatgactggaagacgaggtcatatggtgaccactgagactggagatgtcatgtac
caaaggagaaatgccaatgcagaagtttcactggaattgatcaatatggaggagaaggag
aagttcatgcgtggcgagaagctcatcgctattatctctgaagcggcgtcatctggaatc
tctctacaatcggatagacgtgctatgaataaaagaagacgtgtgcatatcactttggaa
cttccgtggtctgctgacaaggccattcaacagttcggaagaacccatcgatccaatcaa
gtctctggaccagagtatgtttttctgatatctgagttggctggagagaaacgattcgct
tccatcgttgcaaaacgtctggaatctcttggagctcttacccatggagatagaagagcc
actgagacgagagatttgtctcaatttaatatggataataaatatggaagagttgctctt
gatactcttttgaaaactgtaataggacaggctggagtgcctcttatcgagcctcccaaa
gattataaggctggagacttcttcgaagatatgagactttatatggaaggtgttggattg
ctggctaagaacaaaaacggacagtataccattgaaaaagaagcagcgacgattccaaag
ttcctcaatcgaatcctgggactccctgtacacgctcagaactcgctgttccattacttc
tcggaaatcgttgcggagctgattgctcagtccaaacacgatggaacctatgacactgga
atcatggatctgggtactggtgatgatcaggttcggaagctggagactcgagtgttcaca
ggacgagtcgataatggatcgttccgggttgagatgcacaagattggtgtggagagagga
gtcagttgggatgaggcgatggagttgttcaaggagcatagtaatgatgatgacggattc
tatctttgccatccgggcggtgctaacactgccaacacgaaaaaagtggccgccttggta
tacggtattggaaagattcgaatggataacggagctcggctctatgcaataacccgcccg
tctactggtcgatctcccaagttgatgaccatggctgatttgagtaaacgattcagcaag
gttacggtagatgaagccaaggaggtctggaagcagcagtatgattccgccgcgaacatg
tgtcaacacaactacatatactcaaaatgtcgtaccgaatccaatggaacgtattgtgaa
gttggacgacgtacacgaacctatttcgttctgtccggatccgtcttgtctgtttggccg
attgtcgaagaggttctcgctggaagcgatcggaagtcgtctcgaatgcaagtgattcgt
gtcagaactgatcatgatcagaagattgttggtaagttggggataaacagacacacagac
agaggaaaacaattgtcgttatcagtgatctgtctactggtgcttccaagccacgtccgc
aaccttgtcacccaactggaaacccactgtggcagaagttatgtcaaaactgagccctaa
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integrated database retrieval system