Caenorhabditis briggsae (nematode): CBG_15217
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Entry
CBG_15217 CDS
T01054
Name
(RefSeq) Protein CBG15217
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cbr01006
]
CBG_15217
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_15217
Prenyltransferases [BR:
cbr01006
]
Protein prenylation
Rab geranylgeranyltransferase
CBG_15217
Membrane trafficking [BR:
cbr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CBG_15217
Endosome - Lysosome transport
Rab GTPases and associated proteins
CBG_15217
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Motif
Other DBs
NCBI-GeneID:
8584932
NCBI-ProteinID:
XP_045095636
WormBase:
CBG15217
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Position
III:<302826..>305258
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AA seq
532 aa
AA seq
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MDEKLPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGSDWSSFTMTMIHEVEE
NKVFLGHHKTSRPSFQVPKLSEEEISKLSAHLLESEKLVELGNREVIENIQRTWIPRDSD
DVPIKQKLEEMGQMRRFSIDLVPKILVSKGNMVQTLCDSQVSHYAEFKLVNRQLCPTQDK
NTENSAKIMLNPVPCSKGEIFQSSVLSILEKRALMKFITFCTQWSTKPTEEGRQLLGDYS
DRPFSEFLAQMGVAETLQSFIINTIGILQPNPTAMSGMLASCEFMDSVGHFGPSPFLFPL
YGCGELSQCFCRLAAVFGSLYCLGRPVQALVRENDRITAIIANNERINCRHVVMSPRFVP
KDVPIQNVQKIERVVFATDKSIKEVEKEHLTLLNLASLRPKSTISRLIEVGFEACTAPKG
HFLVHATGTQSDDDEKSVESLAEQIFEESQVSPYWKMSFTANSMKFDAEGAGLGSNVVVA
PPVDANIHYSSVIKECRKLFCSTWPDLDFLPRAIKNEEDEEEKEASESSETV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaactgcctgaaagtgtggatgtggtggttttaggtacggggctacctgaa
gcgattttagcatcggcttgtgctcgagccggattgtcggtactgcatttggatagaaac
gaatactacggtagtgattggtcgtcattcacaatgacaatgatacacgaggtggaagag
aacaaggtattcctaggccatcacaaaacttctaggccatcctttcaggttccaaaactc
tccgaagaggaaatctcaaagctgtccgcacatcttttggaatccgaaaaattagtggaa
ttgggaaatcgagaagtcatagaaaatatccagagaacgtggattccacgagattcagat
gacgtgcccataaagcagaagttggaggagatgggacaaatgcgaaggttctcgattgat
ttggtgcccaagattctggtttccaaggggaacatggtccaaaccctttgcgattcccaa
gtctctcactatgccgaattcaagcttgtcaatcgacaactctgcccgacccaagacaaa
aacactgaaaattcagcaaaaatcatgctaaatccagtaccctgtagtaaaggagaaatc
ttccaaagcagcgttctatcaattctcgaaaagcgcgctctaatgaaattcatcacattc
tgcacacaatggagcacaaaacccacagaagaaggccgtcaactgcttggcgactattcg
gaccgcccattttcagagtttcttgctcaaatgggcgtggctgagactttacaaagtttt
attatcaatacgattggaatactgcaaccaaatccgacggcgatgagtggaatgctggcg
tcctgtgaattcatggattctgtcggacactttggtccatctcctttcctcttccctctc
tacggctgtggagagctctcgcagtgtttttgccgactagccgcagtttttggaagtctc
tactgtcttggccgacccgttcaagctctggttagggagaatgatcgaatcactgctatc
atcgccaacaacgagcgcatcaactgccgccacgtcgtcatgtctcctagattcgttccg
aaagacgtaccgattcagaatgtacagaaaatcgagcgagtggtttttgcaacagataaa
tctatcaaagaagtggaaaaagagcatttgacactgttgaatttggcttctcttcgaccg
aaatccacgatttctaggctaattgaagtcggtttcgaggcatgtacagcgccaaaaggg
catttcctggttcatgctactggtacccaaagtgacgacgacgaaaaaagcgtggaatca
cttgccgaacaaatatttgaagagtcccaagtgtcaccttactggaagatgtcgttcaca
gcgaattcgatgaaattcgatgcggaaggggcggggcttgggtcgaatgtcgtcgtggca
cctccagtagatgccaatattcactattccagtgttattaaggagtgccgaaaactgttt
tgctccacttggccggacctagattttctgcctagagctatcaagaatgaagaggacgaa
gaagaaaaagaggcttctgaaagttctgaaaccgtttga
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